Basic Information

Insect: Sarcophaga bullata
Gene Symbol: znf711_3
Assembly: GCA_005959815.1
Location: QOCX01003484.1:11475-16916[-]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0062 18 5.3 0.0 23 48 15 40 8 45 0.90

2 15 0.0004 1.2 9.1 2.6 27 48 49 70 46 76 0.93

3 15 0.23 6.9e+02 0.2 0.1 14 48 115 152 104 157 0.68

4 15 0.036 1.1e+02 2.8 0.1 23 49 158 184 152 187 0.90

5 15 0.0053 16 5.5 1.3 25 48 190 213 184 219 0.89

6 15 0.28 8.3e+02 -0.0 0.1 22 45 216 239 212 243 0.85

7 15 0.07 2.1e+02 1.9 0.1 24 48 246 270 239 274 0.83

8 15 0.0005 1.5 8.8 0.0 26 52 367 393 361 395 0.92

9 15 1.7e-06 0.0052 16.6 0.0 13 48 391 423 390 426 0.87

10 15 0.023 68 3.4 0.5 21 48 426 453 423 458 0.92

11 15 0.33 1e+03 -0.3 0.1 24 37 532 545 523 558 0.79

12 15 0.15 4.6e+02 0.8 0.0 26 48 563 585 556 587 0.88

13 15 0.058 1.7e+02 2.1 0.0 24 44 635 655 624 664 0.81

14 15 0.96 2.9e+03 -1.8 0.1 22 33 665 676 660 689 0.71

15 15 1.3 3.9e+03 -2.2 0.0 20 48 691 719 683 724 0.72

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0062	18	5.3	0.0	23	48	15	40	8	45	0.90
2	15	0.0004	1.2	9.1	2.6	27	48	49	70	46	76	0.93
3	15	0.23	6.9e+02	0.2	0.1	14	48	115	152	104	157	0.68
4	15	0.036	1.1e+02	2.8	0.1	23	49	158	184	152	187	0.90
5	15	0.0053	16	5.5	1.3	25	48	190	213	184	219	0.89
6	15	0.28	8.3e+02	-0.0	0.1	22	45	216	239	212	243	0.85
7	15	0.07	2.1e+02	1.9	0.1	24	48	246	270	239	274	0.83
8	15	0.0005	1.5	8.8	0.0	26	52	367	393	361	395	0.92
9	15	1.7e-06	0.0052	16.6	0.0	13	48	391	423	390	426	0.87
10	15	0.023	68	3.4	0.5	21	48	426	453	423	458	0.92
11	15	0.33	1e+03	-0.3	0.1	24	37	532	545	523	558	0.79
12	15	0.15	4.6e+02	0.8	0.0	26	48	563	585	556	587	0.88
13	15	0.058	1.7e+02	2.1	0.0	24	44	635	655	624	664	0.81
14	15	0.96	2.9e+03	-1.8	0.1	22	33	665	676	660	689	0.71
15	15	1.3	3.9e+03	-2.2	0.0	20	48	691	719	683	724	0.72

Sequence Information

Coding Sequence: ATGCGTAAGCATGTCGATGCAGAACATTCCCATGTAAAGCCAGAACCTCAGCAATGTAAAATATGCAACACATGGTATCGCAACATGTCTGGCTTGAGGACTCACATGAAATTTATGCATGAAAATATTGGCGGTGAACATCGCTGCAATATATGCAATAAAGTTTCAACCAATGCACGTGCTTTAAGaagacatatttatttaaatcatgaaTGCGAACGGAAATATAAATGTCACATGTGTGAAAAGGCTTTTAAAAGAGAACAAGATCTAAGAcaacaacaacaacaacaacataaaatacaaattgcTAAAAGCCACTTAGGatTACCTTCTGAAGGTAAACTACGAGAACATATGCACAGTCATGACGCAACAAAACGACCAATATGCCATAAATGCGGcaagacatttaaaaataattacaatatgaaaaaacacGAAGAAAACGAACATGCTGAAGTAAAACCGGAGCCACAACAGTGTACCATTTGTAATACATGGTATCGTAATATAGCCGGTTTAAAGACTCACATGAAAAATATGCATTATAATATGGAAACCGAACATCGTTGTAGCATTTGTAATAAAGTCTCAACAACACATCGTGCCTTATTAAGGCACATTTATTTGAATCACAAATGTGAAAAGCGTTTCAAATGCAATATGTGTGAAAAGGCTTTTAAAAGAGGACAAGATTTACGAGAGCATATATCAGTGCATACGGGAGAAGCTTTGTATACGTGTCCGAATTGTCCAATGACATTTTCATCCAGTGCAAATATGTATAAACATCGTCAACGTGTACATAAGGCTGAGTATGCTGCTTATAAACAGCAATGTTTTCCgccaaatattataaaacaggCTAAATCTGGTGCTTTAAATAAAGTACACGATAAACGAGAAGACTATGTTGGacaatcttataaaaatattgcttcgttTTTGCCTAAGTGTAAAGTATCTTCAGAATTACAAGGCAAAACTAATCTAATAAACTTGCAAGCTTTATCAGCCACCCAATTTGGGATAGAaTTTCCATCCAAGCGTAAACTCTCATCTCACCTGACCGTCCATAGTACCGTGTACACATGCATGTGTGACATTTGTGGTAgaacatttaaaagtaaatttacattaaaaaaacatatcgAACTGAAGCATTCAGAAAAACCCCGCCAGGATAAAGATCCCCAAGAATGTCCCATATGTTATAAATTGCTTCGAGGTATTAAAGGCCTTAAGGCTCATATGAAAAATATCCATGAAGCTGGCGAACAGGAACATCGTTGTAAAATTTGTAATCACATATCAACAACCGCCAAAGGTCTAAGAGTTCATGAAATATTCCGTCATGAAAAGGAGAGAAAACATAAATGTTACTTTTGTGAGAAAGCGTTTAAAAGGCCATTGGATTTACGAgAACATATTGCAACACATACGGCTAAACGTTTGAGTGCCCATGAAAATACTCATAATCCGCAGAATATATTAATTTGTGATAAATGcggtaaaacatttaaagacaaGTGTCGTTTAAGATTTCATCATCGACACGATCATTCCAGTGAACCAAAACCCGAAAAAATACCAGAACAATGTCCGTTCTGTAACAATGTATCATCGAAATCAAGTGTACACGAGCATGTACGCAATATGCATACAAATAACGATATTGAACATCGTTGTCCAACATGTGGTTTTGTCTCGACCACAGCTAAGGCATTGAAAAAGCATATACTATATAATCATGATGTTGTGCGACGACACAAATGTAATCTATGTGAGAAGGCCTTTAAAAGGCCACAGGATATAAAAGTTcGAGCATATGGCTACTCATACGGaTTGCCAACCAGCCGTCATTTAGCACAACATCGTTGTCATCCGAATGCTATCAAAGCTTATACATGTGATATATGTGGCGAAACAATTGTTACACTTAAGAATCTAAATGAACATAAATTAACGGTACATGGTACTAAAAACACCAAGGATCCGAAACAATGTAAAATTTGCCATAATTGGTATAAAGATTTGAAATATCATTTACGCAATATGCATAGTGACAATTCGGATAAACGTAACGTATGTGAAATTTGTGGTTTTGTATCCACTACCAGGGTGGCTAAAATGAAACATATACGTTTCAAGcataaatcagaaaataaatacaaatgttcTATGTGCGATAAAGCATTTAAAGTGCCCATGTTATTAAAGGAACACATGGCTATACATACTGGTGTCGATTTGTATTCATGCGCACATTGTCCGATGACTTTTAAAGCCAAGTCCAATATGTATAATCATTGCAAACGTATGCATCCGGAAGAATTTGAAAACAGTGTACAGAAACGTCTACGCATACCCAAAACTTTGTAG
Protein Sequence: MRKHVDAEHSHVKPEPQQCKICNTWYRNMSGLRTHMKFMHENIGGEHRCNICNKVSTNARALRRHIYLNHECERKYKCHMCEKAFKREQDLRQQQQQQHKIQIAKSHLGLPSEGKLREHMHSHDATKRPICHKCGKTFKNNYNMKKHEENEHAEVKPEPQQCTICNTWYRNIAGLKTHMKNMHYNMETEHRCSICNKVSTTHRALLRHIYLNHKCEKRFKCNMCEKAFKRGQDLREHISVHTGEALYTCPNCPMTFSSSANMYKHRQRVHKAEYAAYKQQCFPPNIIKQAKSGALNKVHDKREDYVGQSYKNIASFLPKCKVSSELQGKTNLINLQALSATQFGIEFPSKRKLSSHLTVHSTVYTCMCDICGRTFKSKFTLKKHIELKHSEKPRQDKDPQECPICYKLLRGIKGLKAHMKNIHEAGEQEHRCKICNHISTTAKGLRVHEIFRHEKERKHKCYFCEKAFKRPLDLREHIATHTAKRLSAHENTHNPQNILICDKCGKTFKDKCRLRFHHRHDHSSEPKPEKIPEQCPFCNNVSSKSSVHEHVRNMHTNNDIEHRCPTCGFVSTTAKALKKHILYNHDVVRRHKCNLCEKAFKRPQDIKVRAYGYSYGLPTSRHLAQHRCHPNAIKAYTCDICGETIVTLKNLNEHKLTVHGTKNTKDPKQCKICHNWYKDLKYHLRNMHSDNSDKRNVCEICGFVSTTRVAKMKHIRFKHKSENKYKCSMCDKAFKVPMLLKEHMAIHTGVDLYSCAHCPMTFKAKSNMYNHCKRMHPEEFENSVQKRLRIPKTL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01313149;
90% Identity: iTF_01313149;
80% Identity: iTF_01313149;