Basic Information

Insect: Samia ricini
Gene Symbol: -
Assembly: None
Location: BLXV01000016:4011398-4014767[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 7.7e-09 6e-06 26.0 0.0 5 40 34 70 30 72 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	7.7e-09	6e-06	26.0	0.0	5	40	34	70	30	72	0.92

Sequence Information

Coding Sequence: atgttaaaaaaccggatgaataatactgaatcaagaaatacagggaaaaaaagaagaatattagggtctagagcatacagaaattattcagagaaaatgttagagttagcagtggacatggtggaaaataagaagatgtcaagtcgggaggcagaaaaaagttttgggatccctcgacggacgatattaatcaaagtaaaaaaaattcacttgaaaccagctggaagacaaaaaaaactcagtgacgaagaggaacaaaaactggcaaatgtactattagcttcagcagattacggcagccccatgacgaaaatggatgtaaaaatattgatctataaatatgtagaaaaaaattcgcgaactgatttgttcgatggcaaattaccaagcgatacgtgggtggaagcatttttaaacagacatcgttcgaaattaactatcagaacgacagaaaatataaaaaaggtacgggctgagaaaggactagatgaaattgagaagttttatactaatttaagtgaaacactaaaagaagtaccaccgatgaatatattaaattacgatgaaaccaatttgtctgacaatccaggcacttcaaaatgtgtttttagacggggtgtcaaacatcctgaaaggatcataaatagcacaaaaagttccatttctatcatgttcactgcaagcgcagctggaacatgtttaccaacatatgtggtttataaatcctcaaatttatattctgagtggcttgaaggaggcccagctgaaaccagatacaattgctccaaatccggatggtttgatacggcttcattcgaagattattttaaaactattgtggttgagtgggcaaaacaaattcctggcccaaaagtcgtcattggtgataatttgtcttcacacataaatattgaagttgtagagttgtgtcaaaaacacaatataaggttggtatttttaccaccaaattccactcacctaacacaaccgctggacgtagcgtactttggtccactaaaaagagaatggagaaagatcttattggattataaattaaaaaatccaggacagaccaccctgaacaaaaaacactttccaaaacttttggctcagttactagaaaatatgaaacataaggaaagtaacaacataataagtggctttagagctacaggaatatggcctgtaaattcacgaaatgtttttaagagaattcctgagtatttcgatcattcagaatatggaattgatacgactttattagattatctgaaagaatcaagggctgctaagccaatgcaaataaaaagaagtaaaaaattacgtacagaacccggcaagtcagtatgtgttgacgatatctcgacagtaaatattcaattaataacacaaagtaagaggtatgtaaaaaaaaatgcaaagaagagaacaataaaaactaaacaagaagcaaaccaagaacgagagacagaagagatcatagtgccgtggaacacagaaaatgagatgtacttagatgaaattacaggtcaagtaataggaagagaggaaattccatcgaactcatctgaaatcattggaaaaccaacactacggccccaattttcaccagtgatgtataatccagccagactggttgaacttagtatcgaaattatcaatatgcatttaggatcaccagcttacgatactaacgctcaactacccgacgtctgtgtattcaataaaaaaattagaagtgactgtcagaatcagccttttgttacttattatgaaaatgatactccagagtttttaagatcaatgacaaatagttcatctaattctaaagtcataataacctcagatattaaagtaaaccctaagaaaatgaaggacattaagaaaaacattaaattaactaaagtcatcggaaaatcagctttacagatgaaaatcggtacgaatcaagtggtatatgaaaatgcgttacataaaaataagaaaaaactggaaaatctaacaactggaagaaaaaaaagggctgtaaaacggaagaaattgacatattcttatgaaacgagctctgaatcggatattctgagtattgcaaatacagatgattctgaatatgatggatttgatgaatatctaacaacatatttacaagagatagataacaaggaaaactgtgagacagaaaatttcaatgcaacatttggattaagtgatatcagctattttaaaagtgatgtagatttaaaagaagaagactgggttgtagtgaaatttgcgacaaaaaaaagcataaagcactttgttggtcgtgtattatctatgaaaaacaatattcctactgtaaaatttgcaagaaaagttaagaatgtaaaagatggtaaagtgattttcacgtatccgaacgtggaagacgtgtgcgaagtgaatcgcgatgatgtagaaatagtattacctccgccaaaaatttctagacgaggccaaataatgtttgatattatatttaatatttcctacaacatccaataa
Protein Sequence: MLKNRMNNTESRNTGKKRRILGSRAYRNYSEKMLELAVDMVENKKMSSREAEKSFGIPRRTILIKVKKIHLKPAGRQKKLSDEEEQKLANVLLASADYGSPMTKMDVKILIYKYVEKNSRTDLFDGKLPSDTWVEAFLNRHRSKLTIRTTENIKKVRAEKGLDEIEKFYTNLSETLKEVPPMNILNYDETNLSDNPGTSKCVFRRGVKHPERIINSTKSSISIMFTASAAGTCLPTYVVYKSSNLYSEWLEGGPAETRYNCSKSGWFDTASFEDYFKTIVVEWAKQIPGPKVVIGDNLSSHINIEVVELCQKHNIRLVFLPPNSTHLTQPLDVAYFGPLKREWRKILLDYKLKNPGQTTLNKKHFPKLLAQLLENMKHKESNNIISGFRATGIWPVNSRNVFKRIPEYFDHSEYGIDTTLLDYLKESRAAKPMQIKRSKKLRTEPGKSVCVDDISTVNIQLITQSKRYVKKNAKKRTIKTKQEANQERETEEIIVPWNTENEMYLDEITGQVIGREEIPSNSSEIIGKPTLRPQFSPVMYNPARLVELSIEIINMHLGSPAYDTNAQLPDVCVFNKKIRSDCQNQPFVTYYENDTPEFLRSMTNSSSNSKVIITSDIKVNPKKMKDIKKNIKLTKVIGKSALQMKIGTNQVVYENALHKNKKKLENLTTGRKKRAVKRKKLTYSYETSSESDILSIANTDDSEYDGFDEYLTTYLQEIDNKENCETENFNATFGLSDISYFKSDVDLKEEDWVVVKFATKKSIKHFVGRVLSMKNNIPTVKFARKVKNVKDGKVIFTYPNVEDVCEVNRDDVEIVLPPPKISRRGQIMFDIIFNISYNIQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00038699;
90% Identity: iTF_01312169;
80% Identity: -