Rfun056817.1
Basic Information
- Insect
- Rosalia funebris
- Gene Symbol
- Mblk-1
- Assembly
- GCA_037954035.1
- Location
- JAZFAV010000039.1:599483-608676[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-16 2.6e-14 54.4 0.0 1 44 11 55 11 56 0.94 2 2 1.5e-17 3.9e-15 57.0 0.0 1 43 361 404 361 406 0.95
Sequence Information
- Coding Sequence
- ATGTCGGCAGTTGCCGGCAGGAGAACCTACACCGAAGACGAACTGCAAGCGGCCCTTCGGGACATTCAATCGGGTAAACTCGGCACGAGAAGGGCGGCCGTCATCTACGGGATCCCCCGATCGACGCTGCGCAACAAAGTGTACAAACTAGCCTTGGAACGTGAGAGGGAATCTCACCTCAACAGTTCCACCCCACTGAAACTAGACGAGGAAGAAGCCATGGATGACGACAAGGAATTATCCGGGGCAGAGGAGGAGAAAGAAGTGGAGAAGGCGTTACAAGCCCCCTTACTGTCCATGGCGGACCTATTCAGATTCTCGGGTAGGGAACCGAACCCCGACGCTCTTAGGACCCTGCTGCAGAAGGGAAAAGAAGGACAAGACACTTGGGCGGGTATGGAACACAGCGAAGTAGGACCCTATATCCAAAACATCCTCCTAGCCTCGCAGAACTTACTGGCCAACCAGAAACCTCCTGACGGTTCAGTATTAAACCACATGATACCGGAGTTCGTGAAGCGAATCATCGCCGAAGAGCAGCTGTTGAAGATACAGAACAACGGCGACATTGAGAAGCTGACAAGGCCGAGCCCAAGCAATTCTGTCATCACGAAAATAGAAAAACCTAAGTCAGAGTCAGACATGGAAACGGAAGACTCGCCATCGAATGTGATACTGAAAATTCCGTCCTTTAAACCGACGTCGTGCAAGAACGGTAGCGACTTCTTCAGGAGCGCCGTGGAACCTATCAGTATGGTTTCGCCACCGGTTACCAGCGAGTCAGGTTCTCCGCCAATCCTGCCCGGCAAGGGGCTCATCATTAAGGATGTCAAGGACGTTATCGCTCAAAGCATTAGTCAGAAATTCCAGCAAAGTCTGGAGCCGAGAAGGCCCATCATGGACATGGATTTCAAGAGGGGTGGGTTTACGCCGCCGCTTGGGACCGGCATATCGGTTATAAAGACGCAATCCGACATCAGCAGGTCATACCAGCCTCCCAAGCCCCAGAATACAAGCAGTGGTACGACGACAACTGGAGGTAAAGGTACGAGACCGAAAAGGGGCAAATATAGGAACTACGACCGCGATAGCCTGGTAGAAGCAGTCCGAGCGGTACAAAGGGGCGAAATGTCGGTACACAGAGCGGGAAGCTACTATGGCGTGCCGCATTCCACCCTAGAATACAAAGTCAAAGAAAGACACCTAATGAGGCCGCGGAAACGAGACCCGAAACCCAACCCAGTAGATGATAAGATCGCCAGCCTCAAACAGAACGACATCCGCAACTCTCAGGACAAAATGAAACCCATGATGAAGCCTCCGCAGAAATTCCCACCGACCTCTCCAAACGGCATGAAACTGCCGATCTTCGAACCCGGAATGCCTCCCCTGGCAGGCTACAATCCCCCGCCGTTCCCTTTCTGGCCTCATCCAGGCTTCTCCCACATTCCCATGGAGTACGCGAGGAATCCCACTTCGCCGTTTTCCGCCCCAAACCCCGAATTCTTTGCCTCGCAGATGATGCAGAAGCTGCAGGAGGAGTCGTCGAGGACGTTGGGAAGTTCGACGCAAACTACGCCGGGAGGTACGCCGACTCTGGCAAAAAACGCCCGACAGATGGCAGAGTCACTCCTGGAGGGTACTGGGGCGAACGGGTCTTTCCTCGATGGGATCATTAGATCAAGTTTGGAATCAGGGGTACCCAGTAGCGAGGAAAAATCGCTGAAGGAAGAGAAGAATCTAGCACCTGAAAATATGTCCAATAAAGCCCTTTTAGATCAACTCTGTAGGAACAGTAGGCTTACGCCACTATCAAGACCGGCCATCACTGAAGCAAATAGTTCCGGGGATGAGTCATACAGGAAGGGATCCAGCCCTTTGAATTTTGCTACAGGGGGACCTTCACAAGACGACAACAATGACGACGATTCATCGTCTAGGTACGACAAAGACAGCTCCGAGGTCCATACGATAGAGCTTTCGAATGATTCAAATGCATCAAGCGAGAGGAAAGTGAACGAAGAGGAGCGAAAGCCTCCCAGAATATACTTAAAACAAGATCTGGCAAAGCCAGAAAACCTCAAACCCGAGATGTTGGTGCGTTTTCGAGATGTCCTACCCGACATCGACCACAACGGAATGACGGAGAGTGCGCCAAGCAGTGCCTCTGATAACGATGCGCCTCAAGACTGA
- Protein Sequence
- MSAVAGRRTYTEDELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLALERERESHLNSSTPLKLDEEEAMDDDKELSGAEEEKEVEKALQAPLLSMADLFRFSGREPNPDALRTLLQKGKEGQDTWAGMEHSEVGPYIQNILLASQNLLANQKPPDGSVLNHMIPEFVKRIIAEEQLLKIQNNGDIEKLTRPSPSNSVITKIEKPKSESDMETEDSPSNVILKIPSFKPTSCKNGSDFFRSAVEPISMVSPPVTSESGSPPILPGKGLIIKDVKDVIAQSISQKFQQSLEPRRPIMDMDFKRGGFTPPLGTGISVIKTQSDISRSYQPPKPQNTSSGTTTTGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDPKPNPVDDKIASLKQNDIRNSQDKMKPMMKPPQKFPPTSPNGMKLPIFEPGMPPLAGYNPPPFPFWPHPGFSHIPMEYARNPTSPFSAPNPEFFASQMMQKLQEESSRTLGSSTQTTPGGTPTLAKNARQMAESLLEGTGANGSFLDGIIRSSLESGVPSSEEKSLKEEKNLAPENMSNKALLDQLCRNSRLTPLSRPAITEANSSGDESYRKGSSPLNFATGGPSQDDNNDDDSSSRYDKDSSEVHTIELSNDSNASSERKVNEEERKPPRIYLKQDLAKPENLKPEMLVRFRDVLPDIDHNGMTESAPSSASDNDAPQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00165962; iTF_01226538; iTF_00885811; iTF_01289682; iTF_01295875; iTF_01368933; iTF_01014165;
- 90% Identity
- -
- 80% Identity
- -