Malt027518.1
Basic Information
- Insect
- Monochamus alternatus
- Gene Symbol
- Mblk-1
- Assembly
- GCA_037114965.1
- Location
- CM073430.1:76539666-76545193[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-16 2.2e-14 54.3 0.0 1 44 45 89 45 90 0.94 2 2 1.7e-17 3.4e-15 56.9 0.0 1 43 393 436 393 438 0.95
Sequence Information
- Coding Sequence
- atgtttataaGTTTGAGTAGCTTTTCTGTTCACGGCGAAGAGAGCTGGTACAACACCTCACGCGTCTATAATTTCAGTTCTGATTTTAGAGCGAAGCCTAGGATGTCAGCGGTAGCCGGCAGGAGGACCTACACCGAGGACGAACTGCAGGCCGCACTCAGAGACATCCAGTCGGGGAAACTAGGTACGCGGCGCGCTGCCGTCATCTATGGCATACCCCGGTCCACACTCCGAAACAAAGTCTACAAGCTTGCCTTGGAACGCGAGAGGGAGAGCCACCTCAACAGCTCCACGCCTATGAAACTAGACGAGGAGGAGGTCATGGACGACGACAAGGAACTGTCTGGTGCCGAAGAGGAGAAAGAGGTGGAAAAAGCGCTTCAAGGACCTCTCCTAACCATGGCGGACTTGTTTAGGTTCGCCGGAAGGGAGCAAACTCCGGAAGCGCTGAAACACCTCCTCCTAAGAGGCAAAGAGGGGCAAGATATGTGGGCGGGTATGGACCACAGCGAAGTAGGACCCTACATACAGAACATACTCCTGGCTTCTCAGAGCTTGATGGCGAATCAAAAACCTCCGGAAGGTTCCGTACTGAACCAGGACTTCGTGAAACGGATGATGGTCGAAGACCTGATGAAGATACAGAACAACAACGGCGACAGCGAGAAGTTCCCCAGGCCCAGCCCCAGCAATTCCGTGATAACCAAAGTGGAGAAACCCAAGTCGGAGTCTGACATGGAGACGGATGACTCGCCCTCGAATGTGATACTGAAAATTCCGTCCTTCAAGCCGACGTCGAGTAAGAACGGTTGCGACTTGTTCAGGAGTTCCGTGCAAGAGCCCATGGGTAGCACGGCCTCGCCTCCGGTGACCAGCGAGTCTGGGTCTCCCCCGGTGCTGCCCACCAAGGGGTTCATCATGAAGGACGTCAAGGACGTTATCGCTCAAAGCATTAGTCAAAAATTCCAGCAGACGCTGGAGCCCAGGAGACCCATCATAGACATGGACTTTAAGAGAGGCGGGTTTACGCCACCTTTGGGGACCGCCATGCCTGTGATGAAGACGCAGGAGATCAACAGACAGTACCATCCTCCGAAACCAATGCAGAATGCGGGTAGCGGGGCTCCTACGGGAGGGAAAGGTACTCGACCCAAACGTGGCAAATACCGAAACTACGACCGCGACAGCCTAGTAGAAGCAGTCAGAGCAGTACAAAGAGGCGAAATGTCAGTCCACAGAGCTGGAAGCTACTATGGCGTGCCCCATTCCACCCTAGAATACAAAGTGAAGGAGAGACACTTGATGAGGCCAAGGAAGAGGGACCCAAAGCCCAACCCCGTAGACGAAAAAATAGCCAGTCTCAAGCAGAACGATCTGCGCATGTCTCAAGACAAAATGAAGCCTGTGATGAAACCGCCTCAAAAGTTCCCCCCGACCTCGCCCAACGGCATGAAGCTGCCCATCTTCGAGGGGGGCATGACCCCCCTAGCGGGGTACAACCCTCCGCCGTTCCCCTTTTGGCCTCACCCAGGTTTCCCGCACATATCCCCCCTAGAATACGCCGCGAGAAACCCCACCTCCCAGTTCTCTGCCCCCAATCCTGAATTCTTCGCCTCCCAGATGATGCAGAAGCTCCAGGAGGAGTCCTCCAGGTCTCTCGGAAGCTCTACTCAAACGGTACCTGGAGGAATGACGCCCACGTTGGCGAAAAACGCACGACAGATGGCGGAGTCCCTTCTAGAGGGCGCTGGTTCGAACGGTTCCTTCCTGGACGGTATCATAAGGTCCAGTTTGGAAACCGGCGTGCCCGGCTGCGATGAGAAGTCGCCAAAGGAGGAGAAGAACCTTGCTCCCGAGAATATGTCCAATAAGGCGCTCTTGGATCAGCTGTGTCGAAACAGCAGACTCACGCCTCTGTCGAAACCGACCATGACGGAAGCAAATAGTTCAGGGGATGAATCTTATAGGAAAGGATGCAGTCCTTTGAACTTTGCCACAGGGGTTGCTTCGCAAGAGGACCACAATGACGACGACTCCTCTTCGAGGTACGACAAAGACGGCTCTGAGGTCCACACGATAGAGCTCTCGAACGATTCAAACACATCGAGCGAGAGGAAGACGGTGGAGGAGGAGCGCAAACAACCCCGGATATACTTAAAACAAGACCTGGCCAAGCCGGAGAACCTCAAACCAGAGATGCTGGTGCGGTTTCGGGAGGCCTTGCCCGACCTGGACCACAACGGCATGGCCGAGAGTGGGCCCAGCAGTGCCTCAGAGAACGACGCGCCGCAAGACTGA
- Protein Sequence
- MFISLSSFSVHGEESWYNTSRVYNFSSDFRAKPRMSAVAGRRTYTEDELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLALERERESHLNSSTPMKLDEEEVMDDDKELSGAEEEKEVEKALQGPLLTMADLFRFAGREQTPEALKHLLLRGKEGQDMWAGMDHSEVGPYIQNILLASQSLMANQKPPEGSVLNQDFVKRMMVEDLMKIQNNNGDSEKFPRPSPSNSVITKVEKPKSESDMETDDSPSNVILKIPSFKPTSSKNGCDLFRSSVQEPMGSTASPPVTSESGSPPVLPTKGFIMKDVKDVIAQSISQKFQQTLEPRRPIIDMDFKRGGFTPPLGTAMPVMKTQEINRQYHPPKPMQNAGSGAPTGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDPKPNPVDEKIASLKQNDLRMSQDKMKPVMKPPQKFPPTSPNGMKLPIFEGGMTPLAGYNPPPFPFWPHPGFPHISPLEYAARNPTSQFSAPNPEFFASQMMQKLQEESSRSLGSSTQTVPGGMTPTLAKNARQMAESLLEGAGSNGSFLDGIIRSSLETGVPGCDEKSPKEEKNLAPENMSNKALLDQLCRNSRLTPLSKPTMTEANSSGDESYRKGCSPLNFATGVASQEDHNDDDSSSRYDKDGSEVHTIELSNDSNTSSERKTVEEERKQPRIYLKQDLAKPENLKPEMLVRFREALPDLDHNGMAESGPSSASENDAPQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01310255;
- 90% Identity
- iTF_01226538;
- 80% Identity
- -