Basic Information

Insect: Rhopalosiphum padi
Gene Symbol: JARID2
Assembly: None
Location: scf7180000008207.925513:579043-592604[+]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 8 2.6e+04 -3.9 0.0 51 68 499 516 483 525 0.69

2 4 0.027 89 4.1 0.0 21 68 960 1007 939 1021 0.79

3 4 1.7e-20 5.7e-17 62.4 0.0 8 89 1520 1599 1514 1599 0.92

4 4 4.7 1.5e+04 -3.1 0.0 49 63 1613 1625 1609 1640 0.75

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	8	2.6e+04	-3.9	51	68	499	516	483	525	0.69
2	4	0.027	89	4.1	21	68	960	1007	939	1021	0.79
3	4	1.7e-20	5.7e-17	62.4	8	89	1520	1599	1514	1599	0.92
4	4	4.7	1.5e+04	-3.1	49	63	1613	1625	1609	1640	0.75

Sequence Information

Coding Sequence: ATGTCTTCGAATGGGTCGGATGCAAAGAAACGCAAACTGCTGAACAATGAAGAAGCTATTCTTGAGTCGAGTACTAAAAAAATCAAGGTACAAGCACAGCGTAAATTTGCCCAAAATGCTGTGATACCCACCAGCACTGCACAAAAACCTATTCAGACTCCAGTAGTGCCTAATAATGTGACAAAACCACCAATTAAGCGGCCAAATACTGAAGACTTCCTTACCTTCCTTTGTTTTAGAGGTACAAGTTTATTACCTCCACGACTAGATTTCTTCAATAAACCTCAACGCTCTCTATCGGCACAAGAGATTGCTGCTGGAAAAAAAAGAAGAAAAAGCACTCCTATACTGCCAGTAACTAATGCAAATAATCCATATAATGTAAATAGTGTAAATAATGAATCAATTGAACGAAAAAACATTAGTCAGTTATCACAGACCAAATTTCCATTATCTAAACTAGGACAGAAAGTTATGGGTCGAAAGTTGGTAAGATCCAGTTCAAGATATACTGTTAGACAAGAAGCTCTCACATTACGTCAATTAGCTCTTCGTCATGTTCCAAAATTAAAAAAATCCACCTCAAAAGTTATTAAACCTTTAGTAAAAGAAAATAATAAAAAAAAAACTGAGAAAAATGGAAAACAAGTATCATTAGACGGTAAGCAAATACAAAAGTTGAAAGGCCGTATAACTCGATCAAATTCTTTACCAAGTATATTTTGTCCTGCGGTTAATCAACTTCGAGATGATAAAGGTAAATGGTGTAAAGGGAGTTCTAGTAAACCTTCTTCAAAAGCATCTGATGACTCAAAAGATGTTGAAGAAGAAAGACCATCGAGAAAAAAGACTGCATCAAACAATTTAGATCATAGAAGTAATAGTCTGGGTAACATGAAACGAAAGACTAGTATTGTTAAATGTAAAGTGGCAAATAAAAATAACAGAAAAACTAGAAGTTTAGCGAGTAAATCTAAGAGCAGCGACCGAGATAATTATGTTGTTCCTGATAAGAAGGTTGATAAGACTTTGAAGACTGTATCCAAGAGTAACAAAGCAAACAGTTTAATTGAAACAAAACCAACAGTAGACGTGAAAAGAAGAACATCTTCAGTGGATAATATGAAAACAACTCGTGAGAGTAAAGACATAATTAATTCAACCCGTTCAAGGCCCCCTAGAAGAACTAAAGAAGCTGCTACTTTATTTATGGAAATGTTACGAAAAGATATGCGGTGCCCTGATGAGCAAGAAGAAGATGATACATCATCTGTTGAGAGTTTTCCTGATCTTCCCAATACACGAATAAATGAACAACGCGAACGTGAGTTGAAAGTGTTTTCCAAGCAAAACAAAATGGAAAAACATCAAGAAGAACATAAATTATCTGAAAAAAGAGATGATAAACCATTGTCTGATAGTAAAAAGACAAAATTAATTGACAAGAAGAAAGTAGAAAAGTTGAAAAAAAAGTTTGAGGAGAATAATACTCTGGAAAAGAAAAAGACAAAAGAAGTTATAGAGTCAATTAACTTTACTGAAAACAGTGGAGCTGTGTCATTTAAAAGGAATCTGAGGCCTCGACGTTCTTCTACCATGTTAGATGATTATATTATGACTGATTCGGATGAGGACGATATGAAATGTGAATCCCTTGTTGAGGTGACAAAATGCGAAGCTCCTAAATCGTCGAATAAAGTGACAATTGTGGCAGGAAACTCAAAATCTCAAAAGTGTAAGCTAAGTACTGACGAATCTGTTAAAAAAAATCTTAAAATTAATAAGACTGACTTAAAACCGAAAAAAGATTTGAATAAAGATTCTGAAGTTAAAAAAAGTCTTTCTGAAACTAAGTCAAAAAGTATTTTATTAAAACGTGACAAAGAGCTAGAAATCAAGAATAATAAAAATGGTACCGTCGATAAAAAAAATGAAAAATCGTCAAAAAATAAGACTGAAATTTTAGTAATTACTAAAGAGCCAAAAACTACCGGCAGTGGTTCAAAAAATGCCGGAAAAAAAGTGCCACTTCCTAAGCAGCAGTCAACAAAAAATGAAAACGCTTTGAGCAAGAAAAAATCCAATTTAGATCTGTACAATAATAATGATAAAAAAAAACGATCTACATCATCGTCTTCGTCGTCTTCCATGTTTAGCGGTATTACTAGTCAAACGAAAGAAGAGCTTTTGGAACGTATGGCCGAAAATTTTGATGCCATATCTACCGCTTGCGAGGGTGCCGATAAAGCAATGCTGTCAAACATAGCGGATAGCATCAACAGTGCAACTATGAAAAAAAATGTACAAAGCAATGCGAAGGAAAAACGTGTAGATAGCGGTATGGTAGAAAAAAATATGCAGAGTGGTAGTATTGTCGCGGAAAAAAAAATAGCCAACGAAGTGAATTCAGTAAAGAACAAACAAGAGTTAGAAAAAGTTTCAAAAACGGAAAACTTAGTTGCAGTTCCAAAAGAAGAAAATGTCATCGTGACCACTGATAAAGTAGAAAACGTGATTATGGTTGTCGACAAGGTAGAGAAAACGGAGTCTGTGGTAGTGCCATTGAACAAAGTAGAAAAAGTAGAAAATATGGTGTTCCAGACCATAGCTAAAGACTTATTCTTGGGGCAGCAAAAAGAGATCAAGATCACCATACCCGAATACTTCACCGGTAAAAACTTCCAGTTGGATAACAGGTTTAAACAAGACGATGGGCTTTCAGTGTTATCTGAAATTTGTAGCGCCCTGCCCAGATTTAATGAACCTTTTGTGTCTAGTAGTCAGTTGTTAAACAAGATGCCAACAGCCAGTGACAGCAGTTTTGTGAAGTATGTTTCGCCAACCATCAGTGAAGACGAAAAGCCTCCGGTACCGACATTGACGCCGCCGTCGTTTGAAAGCCGCACCGTCAAAATCGTAAATTTGGCGCGTGGCAGCAGCTCGTCCGGGACAAACGACAAAAATGATTTGGCTGCGTCTTGGAAACAAGCGTTCAAAAACGTCAAATTGCCGAAAAATGGAATCGCCTCTGCCGCCGTTTCGGTCGGTAACAACTTGATTGCTTGGACGAAAAAGAAACAAAACGACAATCAAACCCCACCATCAAAGACATACGCTGATGGTATAGATGATGGCACAAAAGAAATAGTTTCTAATAGTAATTTGATGAAAAACACTCTTCAATCGTCATCACTGATAAATGGTACTACGGAAAAGAAATCTGAACCTTCATATAAATGCCAAAAGACTTGTTGCGGCGAAACAAAAACCATGGAAATTTTGGACAGCAAAAAGACGATGTCAACAACAGCCACCAACAATGCGTCCTATCTGGCCAAGACGACCATACTAAACAGTACGAAGTACGATTTGAAATTTGAAAAACGTTCATCATCGGCTACAATAGCGACTACTGCAGCGCCCATCAGCGTCGAAAAACAACAACAAATCCGCAAAGACATCGTAGGTGACGTTTCGTCTTCGGATGATCAGAGTCCGGAGAAGAAGATATTCCACCAGCGGCGGCTGTCTACCACCCAGTCGTGTAGCGGAAATAGTTCCGACGCTTTTTCACCCGATAACGAGACGAGTGTTTATGCTTTCCAGCCCGATTTGCCGGTTGCCAGCACTCCTTTTCGTCGGAACAAACCACAATCGCCTGCCAAGTCCAGGACGGTTTCGCCCAACACGTCAATCGCTGTGAGTATTGAAAATGATTCTATGGAAGAAAAATCCCATCAGTCCACCGTGTCATCAACGACAACGGATGTTGATAGCGAGGAAGGACGGCTTTTTTACATTCCATTACCGGCCGGTGTTCGGGCACAGCCGATGATTCAAGGCGTCACTGTAAAGCTGGGGACGGAAGGACCACAGAAAAAATTGGTGATGAGCGCTAAGCTAGTAACCAAACCCCCTGCTTCTACGATACCAGTCAGTTCCATATCGCCAAAACCTGAGCGGAAAATCAAACCGCTGTGCACTACCAAAATTACCAACAGCACTACCCCCGTTGGCACTGTGCAACCAACTACTAGAACTGTTCAGCCCCCTAAATGTACCCCCTCGACTTCAAAACAAGCGTTACCATTATTGCCACAGCCGCAAATCCCGGAAACGAAAGACGATAAGAAACGGTTACAACAAATCACTACAACTACTAATTCTACTACTACTGCCATTACTTCTGCTAAGGAATCGAAAAAATCGTCGTCCGTATCCGCCACTAACAACAAGAAACAAAAAAAGACTGAAAAACAAGTTAACAATAAGAGGAAGTCCAGCGAAAAAGTAGCTTTGAAGAAGAAATCGTCTAAAGAATATTCCGACATGTTAGATGCGCCGACGTTTTATCCATCCGAAGAAGACTTTAAGGATCCTTTAGAATATTTTGAAATAATCAAACCCGTTGCTCAAAAATACGGCATATGCAGAGTCGTGCCGCCACCTAGTTTTAAGCCGGAATGTAAAGTCAGCGACGACATGCGTTTCACGGCATACAACCAATATGTGCATAAGATGATGAACCGTTGGGGCCCAAACGTCCGCGAAATGATAGCCATGAAAAAGTATCTGGAAACGCAGTCAATAGTCTTGTCCAACCCTCCGCTAATTGGTGGCATGGAACTGGATTTACCCAAGCTGTACCACACGGTACAGGAGCTTGGCGGACTTAAAGAAGTGATCGAGCTGGATAAGTGGTGTCGTGTTGCCGACTTGATGAAGATCCCGAAAAGTGCTCAAGACCGCGTCACTAAACTCGACGACATTTACTGCAAATATCTATTGCCTTACGACACACTCTCACACGATGAGCGTCAAAAATTGATCGCAGAGGTTGATAAAGAGTGGAAACAGATTTGCAAAAAAGGCGATACTGATGATGAGCTGTATGAAGACGTCAACGATTGTATAGCAAAGGGTCGAAGTATCGCATTGAGCGCTTATTACCGGGTTGCGCGCAACACTGTCGCCATGTGGTTTAAAGAACAGCAGCAACAACAACCGTCGGGCAGCCACTCGTCGTCTACGTCAGCAGCTACGGCGGCGGTGGTCCGGGCTGAAGACGTTGAGTCGCTTTACTGGAAAAATGTGCAGGATAGGAAGAACCACATTTGCGTGCTGTCCGGGTCAATCGACTCTGGCGCAGAGGGCTACGGATTCCCGACGACCAAGACAGCCACTTTCACCAAACACCCGTGGAATCTCAAGGTTCTCACCAACAATCCAGTGTCAGTGCTCAAGTCCCTGGGCCCAGTGATGGGCATGACTGTACCCACCATACACATGGGCATGGTATTTTCAGCATGCTGTTGGTACAAGGACCCACATGGACTACCATGGATTGAGTACCTGCATACTGGTGCTGACAAAGTGTGGTATGGTGTGCCATCTGATCAAAGTGACCGGTTTCGGGCAGCCATGAAGCGTCTGCTACCGCGGGCTGTAGCAGAAGGCCAGAACCATCACTCATGGCTAGCTGCGGACAGTGGTATGGTGCCACCTAGTCGTTTGCTGGAGCATGGCGTCACCCTTACCCGAACAGTGCAAAATCCGGGTCAGTTCCTCATTGTCATGCCGCGCGCTTACACGTGCAATGTGTCCACTGGTTATGTTATATCTGAGAGCGTGTACTTCACACAGCCTGGTTGGCTTGACGGTGCCGAGAAGATTTTCCAGGACTTGCAGAAAAATTGTGAACCAGCCGCCTTTTCGTTTGAAAAGCTTCTGATAAACATGTCCACAGATTCACGTACACCTCAAAACATATTAAAACAACTGCTAAATATGTTGAGCAACATGAGAGATTGTGAAGTGGCGCTTCGAAGTCAGCTGGTAGAGGATTTAGGCCTAAAGGCTTCTGAACGCATTCGGCCCACAACATCCAAATCAAACGAGAATAACGATGATTATGAGTGTGATGTGTGTCATTCAATTCTTTACATATCAATGGTGAACAATTCACACGAAGACTGTGACTATTGTCTGAGACATGGCATTGAGATTTTATCGAAAAAACACAACCAACTCAAGTATTGCAAGTTTCTATATACCTTTGACGAGACTGATTTGGATATGATATTAGTGAAACTTCGCGAAAGGATTGATTCAAAAAAAAAGAAGACATCTACTAAAAGTTGA
Protein Sequence: MSSNGSDAKKRKLLNNEEAILESSTKKIKVQAQRKFAQNAVIPTSTAQKPIQTPVVPNNVTKPPIKRPNTEDFLTFLCFRGTSLLPPRLDFFNKPQRSLSAQEIAAGKKRRKSTPILPVTNANNPYNVNSVNNESIERKNISQLSQTKFPLSKLGQKVMGRKLVRSSSRYTVRQEALTLRQLALRHVPKLKKSTSKVIKPLVKENNKKKTEKNGKQVSLDGKQIQKLKGRITRSNSLPSIFCPAVNQLRDDKGKWCKGSSSKPSSKASDDSKDVEEERPSRKKTASNNLDHRSNSLGNMKRKTSIVKCKVANKNNRKTRSLASKSKSSDRDNYVVPDKKVDKTLKTVSKSNKANSLIETKPTVDVKRRTSSVDNMKTTRESKDIINSTRSRPPRRTKEAATLFMEMLRKDMRCPDEQEEDDTSSVESFPDLPNTRINEQRERELKVFSKQNKMEKHQEEHKLSEKRDDKPLSDSKKTKLIDKKKVEKLKKKFEENNTLEKKKTKEVIESINFTENSGAVSFKRNLRPRRSSTMLDDYIMTDSDEDDMKCESLVEVTKCEAPKSSNKVTIVAGNSKSQKCKLSTDESVKKNLKINKTDLKPKKDLNKDSEVKKSLSETKSKSILLKRDKELEIKNNKNGTVDKKNEKSSKNKTEILVITKEPKTTGSGSKNAGKKVPLPKQQSTKNENALSKKKSNLDLYNNNDKKKRSTSSSSSSSMFSGITSQTKEELLERMAENFDAISTACEGADKAMLSNIADSINSATMKKNVQSNAKEKRVDSGMVEKNMQSGSIVAEKKIANEVNSVKNKQELEKVSKTENLVAVPKEENVIVTTDKVENVIMVVDKVEKTESVVVPLNKVEKVENMVFQTIAKDLFLGQQKEIKITIPEYFTGKNFQLDNRFKQDDGLSVLSEICSALPRFNEPFVSSSQLLNKMPTASDSSFVKYVSPTISEDEKPPVPTLTPPSFESRTVKIVNLARGSSSSGTNDKNDLAASWKQAFKNVKLPKNGIASAAVSVGNNLIAWTKKKQNDNQTPPSKTYADGIDDGTKEIVSNSNLMKNTLQSSSLINGTTEKKSEPSYKCQKTCCGETKTMEILDSKKTMSTTATNNASYLAKTTILNSTKYDLKFEKRSSSATIATTAAPISVEKQQQIRKDIVGDVSSSDDQSPEKKIFHQRRLSTTQSCSGNSSDAFSPDNETSVYAFQPDLPVASTPFRRNKPQSPAKSRTVSPNTSIAVSIENDSMEEKSHQSTVSSTTTDVDSEEGRLFYIPLPAGVRAQPMIQGVTVKLGTEGPQKKLVMSAKLVTKPPASTIPVSSISPKPERKIKPLCTTKITNSTTPVGTVQPTTRTVQPPKCTPSTSKQALPLLPQPQIPETKDDKKRLQQITTTTNSTTTAITSAKESKKSSSVSATNNKKQKKTEKQVNNKRKSSEKVALKKKSSKEYSDMLDAPTFYPSEEDFKDPLEYFEIIKPVAQKYGICRVVPPPSFKPECKVSDDMRFTAYNQYVHKMMNRWGPNVREMIAMKKYLETQSIVLSNPPLIGGMELDLPKLYHTVQELGGLKEVIELDKWCRVADLMKIPKSAQDRVTKLDDIYCKYLLPYDTLSHDERQKLIAEVDKEWKQICKKGDTDDELYEDVNDCIAKGRSIALSAYYRVARNTVAMWFKEQQQQQPSGSHSSSTSAATAAVVRAEDVESLYWKNVQDRKNHICVLSGSIDSGAEGYGFPTTKTATFTKHPWNLKVLTNNPVSVLKSLGPVMGMTVPTIHMGMVFSACCWYKDPHGLPWIEYLHTGADKVWYGVPSDQSDRFRAAMKRLLPRAVAEGQNHHSWLAADSGMVPPSRLLEHGVTLTRTVQNPGQFLIVMPRAYTCNVSTGYVISESVYFTQPGWLDGAEKIFQDLQKNCEPAAFSFEKLLINMSTDSRTPQNILKQLLNMLSNMRDCEVALRSQLVEDLGLKASERIRPTTSKSNENNDDYECDVCHSILYISMVNNSHEDCDYCLRHGIEILSKKHNQLKYCKFLYTFDETDLDMILVKLRERIDSKKKKTSTKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00134026;
90% Identity: iTF_00972837;
80% Identity: -