Rpad011583.1
Basic Information
- Insect
- Rhopalosiphum padi
- Gene Symbol
- Bgb
- Assembly
- None
- Location
- scf7180000007785.674298:220120-237830[+]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.5e-82 3.3e-78 261.6 1.0 1 164 41 205 41 208 0.99
Sequence Information
- Coding Sequence
- ATGCTCATGATGAACGATTTCGGGTCGATGGGCCCGGGCAACATGATGCCGCCGTCGTTCAACCCCATGTGCCAGGGGCTGTTCGAACACCAAATGCCCAAGCCCAGGCTGGCGTTCAAGATGCCCCGTGTGGTGCCCGACCAGAAGAATAAGTTTCAGACCGACGATCTGTTCAAACGACTCAGTCGTGAGAGTGACGTTAGGTATACGAGCTATAGAGACAGGCCTCACGAAGAACGACAAAACCGTTTTCAAATGGGTTGTCGCGAAGGACATGTAGACATCGCTTTCGCCACAACAGGGACAAATCTGCAACTTATGTTCACTCCGAACATGCCGCCGATGACATCTTACCACCAACCCACAATTGGTTATTGTGATTTTGAAAAAGAACAAGGAATGGTCCACATCCTATCGCCGTTTATAATGAACGGTGTTTGCGTGCAATGGAAAGGTCGGATCAACTTAGAAAAATTAGACGGTATCGGATGTTTGGAATTCGACGAAGAACGAGCAATGATTGAACACCAAATATTGCAAGAACAGATAGAGAGGTATAACAACCGCATCAAAGACCACCAGGACAAATCGCGGGTGTATAGACATCAAGAACGAGTCAACGGACCCGAAATGGACGTCAACAAACGATTTAATAATTTTTAA
- Protein Sequence
- MLMMNDFGSMGPGNMMPPSFNPMCQGLFEHQMPKPRLAFKMPRVVPDQKNKFQTDDLFKRLSRESDVRYTSYRDRPHEERQNRFQMGCREGHVDIAFATTGTNLQLMFTPNMPPMTSYHQPTIGYCDFEKEQGMVHILSPFIMNGVCVQWKGRINLEKLDGIGCLEFDEERAMIEHQILQEQIERYNNRIKDHQDKSRVYRHQERVNGPEMDVNKRFNNF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00340341;
- 90% Identity
- iTF_01330334;
- 80% Identity
- -