Cced002601.1
Basic Information
- Insect
- Cinara cedri
- Gene Symbol
- Bgb
- Assembly
- GCA_902439185.1
- Location
- CABPRJ010001963.1:5221-23524[+]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-81 1.1e-77 259.5 1.1 1 165 42 209 42 211 0.97
Sequence Information
- Coding Sequence
- ATGCTCATGATGAACGATTTTGGGTCGATGGGCCCGAGCAACATGATGCCGCCGTCGTTCAACCCGGCGATGTGCCAGGGTCTATTCGAACACCAGATGCCCAAGCCTCGGCTCGCGTTCAAAATGCCCCGCGTCGTGCCCGACCAAAAGAACAAGTTCCAGACGGACGACCTGTTCAAACGGCTGAGCCGCGAGAGCGACGTGAGGTACACCAGCTACAGAGACAGACCGCACGAAGAGCGACAAAACCGTTTTCAAATGGGTTGTCGGGAAGGGCACGTAGACATTGCTTTCGCCACTACGGGAACTAATTTGCAACTCATGTTTACTCCGAATATGCCGTCGATGGCTTCTTATCATCATCACCAGCCTACAATTGGTTATTGTGATTTCGAAAAAGAACAAGGAATGGTGCACATTTTGTCGCCGTTTATAATGAACGGAGTGTGCGTGCAGTGGAAAGGTCGTATTAATTTAGAAAAGTTGGACGGCATCGGGTGTTTGGAATTTGACGAAGAACGAGCGATGATCGAACATCAGATATTGCAAGAACAAATCGAAAGGTATAACAACCGCATCAAAGACCACCAGGATAAACCGCGAGCGTACAGACATCATCAAGAACGCGTTAACATCCCCGAAATGGACGTCAACAAGAGATTCAATAATAATTTTTAA
- Protein Sequence
- MLMMNDFGSMGPSNMMPPSFNPAMCQGLFEHQMPKPRLAFKMPRVVPDQKNKFQTDDLFKRLSRESDVRYTSYRDRPHEERQNRFQMGCREGHVDIAFATTGTNLQLMFTPNMPSMASYHHHQPTIGYCDFEKEQGMVHILSPFIMNGVCVQWKGRINLEKLDGIGCLEFDEERAMIEHQILQEQIERYNNRIKDHQDKPRAYRHHQERVNIPEMDVNKRFNNNF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00135074; iTF_01032645; iTF_01167365; iTF_01031720; iTF_01303948; iTF_00972813; iTF_00463122; iTF_00670006; iTF_01328374; iTF_00018776; iTF_00308600; iTF_01305304; iTF_00468731; iTF_01346235; iTF_01330334; iTF_01037503; iTF_00418050; iTF_00811730;
- 90% Identity
- iTF_01330334;
- 80% Identity
- -