Basic Information

Insect: Rhopalosiphum nymphaeae
Gene Symbol: FTZ-F1
Assembly: GCA_036289425.1
Location: JAZAQC010000021.1:661961-674423[+]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 5.5e-76 3.5e-72 244.6 27.2 7 408 1 499 1 500 0.73

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	5.5e-76	3.5e-72	244.6	27.2	7	408	1	499	1	500	0.73

Sequence Information

Coding Sequence: ATGCGAGGAGGCCGGAACAAATTCGGACCTATGTACAAACGGGACAGGGCGAGAAAGTTACAAATGATGCGTCAACGACAGATGGCCGTGCAGACGTTGCGCGGTGGCGTGGTCACGTCGGCCGGAGCCAACAACCACCACCAATTCGCCATGTTGGCCGGCGACGCGGTCACGCTAGGCCAGTACCCCGGCTCTACCATCACGTCATCGGTGTCTAGTTTGCACATCAAACAAGAAATTCAGATTCCCCAGGTGTCTTCGTTGACGTCCTCACCCGACTCGTCTCCCAGCCCGATCGCCGTGGCTCTGGGCCAGGCCGGACTCGGGTCTTTAGCCACAGGTGCCGGAGGTACCACGTGTGTGGTCAACCAACATTCGCAAATGACGTTGCAAATCGTGGCATCGGCCAACggcaacaataacaacaacactagcagcaacaacaacaacaacaacagcacGGGCGTGACCAACATGACCAGTGCAAACGGCGGAGTGCCGCCGTCGCAACACCAGCAACATCACCAGCAGACacagcagcaacaacaacaacagcaacaacagcaacagcagtcGGCGGTCCCGGCCGCGTCCATGTTGTCTGTGAACAAAATGTGGTCGCCACCGTCGTCGCCTAAGAACTACCTGTTGTCCGCGCAccagcagcaacagcaacagcaacaacatCACGTGCCgcagcaacaacaacagcagcaacagcaacagcagatGGTGGACGGCGGCGGTAGCACGTCGACGGCGGCGGTCGCGACCGCCAATGGTGGCGGCGTTAAAGGCATGTCGCCCATGATCCGGGACTTTGTGCAGGGTCTGGACGACCGGGAGTGGCAGAGCTCGCTGTTCGGCCTGTTGCAGAACCAGACGTACAACCAGTGTGAGGTCGATCTGTTCGAGCTCATGTGCAAGGTGCTCGACCAGAATCTATTCTCGCAGGTGGACTGGGCGCGGAATTCGGtgtttttcaaagatttgaagGTGGACGACCAAATGAAACTGTTGCAGCACTCCTGGTCCGACATGCTGGTGCTGGATCACATCCATCATCACATGCATAACAACCTGGCCAACGAGATCATGTTGCACAATGGGCAAAAGTTTGATCTGCTAGCGCTCGGTCTGCTTGGTGTCACCACGATGGCCGACTGTTTCGCCCAGGTCATCGATAGGTTACAGGAGCTCAAGTTCGACGTCGGCGATTACATTTGCTTAAAGTTCCTGCTACTGTTGAACCCCGACGTTAAAGGGATCGGTAATAGTAAACATGTTCATGAAGGTCACGAGCAAGTGTTGAAAGCTCTGTTGGACTATTGCATCACAGCTAACTCTCAAGTACAGGACAAATTTACCAAGTTGTTGTCCGTACTGCCCGAAATCCATCACATAGCCACCAGGGGCGAGGAGAGTCTGTACTTGAAGCATTGTAGTGGCGGTGCTCCCACGCAGACGTTGCTCATGGAGATGCTACACGCCAAGCGAAAATAA
Protein Sequence: MRGGRNKFGPMYKRDRARKLQMMRQRQMAVQTLRGGVVTSAGANNHHQFAMLAGDAVTLGQYPGSTITSSVSSLHIKQEIQIPQVSSLTSSPDSSPSPIAVALGQAGLGSLATGAGGTTCVVNQHSQMTLQIVASANGNNNNNTSSNNNNNNSTGVTNMTSANGGVPPSQHQQHHQQTQQQQQQQQQQQQQSAVPAASMLSVNKMWSPPSSPKNYLLSAHQQQQQQQQHHVPQQQQQQQQQQQMVDGGGSTSTAAVATANGGGVKGMSPMIRDFVQGLDDREWQSSLFGLLQNQTYNQCEVDLFELMCKVLDQNLFSQVDWARNSVFFKDLKVDDQMKLLQHSWSDMLVLDHIHHHMHNNLANEIMLHNGQKFDLLALGLLGVTTMADCFAQVIDRLQELKFDVGDYICLKFLLLLNPDVKGIGNSKHVHEGHEQVLKALLDYCITANSQVQDKFTKLLSVLPEIHHIATRGEESLYLKHCSGGAPTQTLLMEMLHAKRK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01032006;
90% Identity: iTF_00136226;
80% Identity: iTF_01304946;