Mcer004288.1
Basic Information
- Insect
- Myzus cerasi
- Gene Symbol
- FTZ-F1
- Assembly
- None
- Location
- Mc1344:11056-23720[-]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1e-12 9.5e-09 35.8 2.6 7 57 1 50 1 104 0.63 2 3 8.4e-14 7.9e-10 39.3 11.9 76 238 158 335 118 337 0.54 3 3 3.2e-52 3e-48 165.9 3.1 238 408 386 553 364 554 0.96
Sequence Information
- Coding Sequence
- ATGCGAGGAGGCCGAAATAAATTCGGGCCCATGTACAAACGGGACAGGGCGAGAAAGCTGCAGATGATGCGTCAACGACAGATGGCCGTGCAGACGTTGCGCGGCGGCGTGGTAACGTCGGCCGGGGCCAACAACCACCACCAATTCGCCATGTTGGCCGGCGACGCGGTCACGCTAGGCCAGTACCCCGGTTCCACCATCTCGTCCTCGGTGTCCAGTTTGCACATCAAACAGGAAATTCAGATTCCCCAGGTGTCTTCGTTGACGTCCTCGCCGGACTCATCTCCAAGCCCGATCGCCGTCGCTCTGGGCCAGGCTGGACTCGGTTCTCTGACCACGGGCGCCGGTGGTACCACGTGTGTGGTCAACCAACACTCACAAATGACGCTGCAAATTGTGGCTTCGGCTAACGGCAACAACAATAACAACAACACTAGCAACAGCAACAACAACAACAGCACGGGCGTAACCAACATGACCGGTGCAAACGGCGGGGTCCCACCGTCACAACACCAGCAACATCACCAGCAGGCACAACAGCAACAACAGCAACAACAGCAACAGCAACAACAGTCGGCTGGACCTGCCTCGTCCTTGTTGTCCGTAAACAAAATGTGGTCGCCACCGTCTTCGCCGAAGAACTACCTGTTGTCCGCTCACCAGCAGCAACAGCAGCAACACCACGTGCCACAGCAGCAACAGCAGCAGCAACAACAGCAACAGCAGCAACAGCAGATGGTGGTGGACGGCGGCGGTAGCTCGTCGACCGCCGCGACCGCCAACGGTGGTGGCAGCGGTGTCAAAGGTATGTCGCCCATGATCCGGGACTTCGTGCAGGGACTGGACGATCGGGAGTGGCAAAGCTCGCTTTTCGGCCTTTTGCAAAACCAGACGTACAACCAGTGCGAGGTCGATCTGTTCGAACTCATGTGCAAGGTGCTCGACCAGAATCTATTCTCGCAGGTGGACTGGGCGCGGAACTCTGTGTTCTTCAAGGATTTGAAGGGGGTCGGCTGTGACGGCGTCCTCGGCGGCGGTGGTGCGCTCGCCGTCCGTCCGTTCCCTCCGCTTCGCCATCGCCGCCGCCGCCACCTTTTGACGATGCTCATTATGTGTCGGCGTTGCCGTTTCGCCGCCGCCGCCGCCGCCGTTGATAAAGTGGACGACCAGATGAAACTGTTGCAGCACTCGTGGTCCGACATGTTAGTGCTGGACCACATCCACCAGCACATGCACAACAACCTGGCCAACGAGATCATGTTGCACAACGGGCAAAAGTTTGATCTACTCGCTCTCGGTCTGCTTGGCGTCACCACGATGGCCGACTGTTTCGCCCAGGTCATCGACAGGTTACAGGAGCTCAAGTTTGACGTCGGCGATTACATTTGCCTAAAGTTCCTGCTGCTGTTGAACCCTGACGTCAAAGGGATCGGTAACAGTAAACACGTTCACGAAGGTCACGAACAAGTGTTGAAGGCTCTGTTGGACTATTGCATCACAGCCAACTCTCAAGTACAGGACAAATTTACCAAATTGTTGTCCGTGCTGCCCGAAATTCATCACATAGCTACCAGAGGCGAAGAGAGTCTGTACTTGAAGCACTGTAGCGGCGGCGCTCCCACGCAGACGTTGCTCATGGAGATGCTTCACGCCAAGCGAAAATAA
- Protein Sequence
- MRGGRNKFGPMYKRDRARKLQMMRQRQMAVQTLRGGVVTSAGANNHHQFAMLAGDAVTLGQYPGSTISSSVSSLHIKQEIQIPQVSSLTSSPDSSPSPIAVALGQAGLGSLTTGAGGTTCVVNQHSQMTLQIVASANGNNNNNNTSNSNNNNSTGVTNMTGANGGVPPSQHQQHHQQAQQQQQQQQQQQQQSAGPASSLLSVNKMWSPPSSPKNYLLSAHQQQQQQHHVPQQQQQQQQQQQQQQQMVVDGGGSSSTAATANGGGSGVKGMSPMIRDFVQGLDDREWQSSLFGLLQNQTYNQCEVDLFELMCKVLDQNLFSQVDWARNSVFFKDLKGVGCDGVLGGGGALAVRPFPPLRHRRRRHLLTMLIMCRRCRFAAAAAAVDKVDDQMKLLQHSWSDMLVLDHIHQHMHNNLANEIMLHNGQKFDLLALGLLGVTTMADCFAQVIDRLQELKFDVGDYICLKFLLLLNPDVKGIGNSKHVHEGHEQVLKALLDYCITANSQVQDKFTKLLSVLPEIHHIATRGEESLYLKHCSGGAPTQTLLMEMLHAKRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00136226; iTF_00136155; iTF_00136157; iTF_01304893; iTF_01304946; iTF_00940543; iTF_00941580;
- 90% Identity
- -
- 80% Identity
- -