Rmai001097.1
Basic Information
- Insect
- Rhopalosiphum maidis
- Gene Symbol
- Xbp1
- Assembly
- GCA_003676215.3
- Location
- NC:28129734-28135809[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.1e-14 2.8e-11 42.6 8.4 1 64 55 118 55 119 0.96 2 2 0.024 13 5.3 1.2 36 55 104 123 103 126 0.78
Sequence Information
- Coding Sequence
- ATGGCGCCCAACATTATTCGGCCTAGTCAAATGCTGATATTCAACTCAGCCATGTGCTATGTCAAACAGCGACAGCACCCGGCCGCTGGGGACATCGACGACGGATCGTCGATATCATCGAAATCGCCGCCGGCCAAGAGGACGTACGTAAAAAACATCTCACCCGAGGAGAAAATATTGCGCAAgaaATTACGAAACAGAGAAGCAGCACAATTATCTAGAGATAAAAAGAAAGcacaattcaatattttatcaggAATGGTTCATGGGCTAAGAAAAGAgaatGTACATTTAAGAGAAGAAATAGAAACTTTACGAGCCAACCAAGAGCAATTGATCGCTGAAAATGAAAGATTACGAGAACAACTTTCGACTGAGTCATCCATACCAAAATCAGTAGTTACAGAATTCTGTACAACAGCAGTTAATAACAAGATTTCGATTAACGGACCTGCCGTGTCCAATAGACACCCTCTGCAGAAGGGCAAACGGAATCGAACATCTTGTTTGATGCTCTGTTGTCAGATTCTGTTCCTATTACTGACCATTCCATCCTACATGATCTCAAGCTTCCAGACGACGATGATGATATGGACTGGCTTGACAACAATGTTTCAAAACGTTTGGAGAAAATTGCTGATGAACTACTCGGCGaaagTTTCCTTAATGAATGTTCTCTTGATGAAATGGTGGGGGGCACATCAGAAGTCATGGAACCCggccaaaatattaatttacccaATGCAAACATAA
- Protein Sequence
- MAPNIIRPSQMLIFNSAMCYVKQRQHPAAGDIDDGSSISSKSPPAKRTYVKNISPEEKILRKKLRNREAAQLSRDKKKAQFNILSGMVHGLRKENVHLREEIETLRANQEQLIAENERLREQLSTESSIPKSVVTEFCTTAVNNKISINGPAVSNRHPLQKGKRNRTSCLMLCCQILFLLLTIPSYMISSFQTTMMIWTGLTTMFQNVWRKLLMNYSAKVSLMNVLLMKWWGAHQKSWNPAKILIYPMQT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00972804; iTF_00135911; iTF_00463115; iTF_00018765; iTF_01350169; iTF_01032638;
- 90% Identity
- iTF_00972804; iTF_00463115; iTF_00018765; iTF_00135911; iTF_01350169; iTF_01032638;
- 80% Identity
- -