Msac009316.1
Basic Information
- Insect
- Melanaphis sacchari
- Gene Symbol
- Xbp1
- Assembly
- GCA_002803265.2
- Location
- NW:1103473-1107452[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.6e-14 2.1e-11 43.0 8.3 1 64 55 118 55 119 0.96 2 2 0.047 28 4.2 0.9 37 55 105 123 104 124 0.73
Sequence Information
- Coding Sequence
- ATGGCGCCTAACATTATTCGGCCTAGTCAAATGTTAATATTCAACTCTGCCATGTGTTACGTGAAACAGCGACAGCATTCGGCCGCTGGAGACGTCGGCGGTGGATCGTCAATGTCGCCGAAATCACCGCCGGCCAAGCGGACGTACGTAAAAAATATCTCACCCGAGGAGAAAATATTGCGCAAgaAATTACGAAATAGAGAAGCAGCACAATTGTCTAGAGATAAAAAGAAAGcacaattcaatattttatcaggAATGGTTCATGGCTTAAGAAAAGAgaatgtacatttaaaagaaGAAATAGAAACTTTACGGGCCAACCAAGAGCAATTGATTGCCGAAAATGAAAGATTACGAGAACAACTTTCCATTGAGTCATCCGTACCAAAATCAGTAGTTACAGATTTCTGTACAACAGCAGTTAATAACAAGTTTTCGATTGATGGACCTGCCGTGTCCAATAGACACCCTCTGCAGAAGGGCAAACGGAGTCGAATATCTTGTTTGATGCTCTGTTATCAGATTCTGTTCCTATTACTGACCATTCCATCCTACATGATCTCAAGCTTCCAGAGGACGATGATGATATGGATTGGCTTGACAACAATGTTTCAAAACGTTTGGAGAAAATTGCTGATGAACTACTCGGCGaaaGTTTCCTTAATGAATGTTCTCTTGATGAAATGGTGGGGGACACATCAGAAGTCATGGAACCCGgtcaaaatattgatttacccAATGCAaacataa
- Protein Sequence
- MAPNIIRPSQMLIFNSAMCYVKQRQHSAAGDVGGGSSMSPKSPPAKRTYVKNISPEEKILRKKLRNREAAQLSRDKKKAQFNILSGMVHGLRKENVHLKEEIETLRANQEQLIAENERLREQLSIESSVPKSVVTDFCTTAVNNKFSIDGPAVSNRHPLQKGKRSRISCLMLCYQILFLLLTIPSYMISSFQRTMMIWIGLTTMFQNVWRKLLMNYSAKVSLMNVLLMKWWGTHQKSWNPVKILIYPMQT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01303938;
- 90% Identity
- iTF_01303938;
- 80% Identity
- -