Basic Information

Gene Symbol
Xbp1
Assembly
GCA_002803265.2
Location
NW:1103473-1107452[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.6e-14 2.1e-11 43.0 8.3 1 64 55 118 55 119 0.96
2 2 0.047 28 4.2 0.9 37 55 105 123 104 124 0.73

Sequence Information

Coding Sequence
ATGGCGCCTAACATTATTCGGCCTAGTCAAATGTTAATATTCAACTCTGCCATGTGTTACGTGAAACAGCGACAGCATTCGGCCGCTGGAGACGTCGGCGGTGGATCGTCAATGTCGCCGAAATCACCGCCGGCCAAGCGGACGTACGTAAAAAATATCTCACCCGAGGAGAAAATATTGCGCAAgaAATTACGAAATAGAGAAGCAGCACAATTGTCTAGAGATAAAAAGAAAGcacaattcaatattttatcaggAATGGTTCATGGCTTAAGAAAAGAgaatgtacatttaaaagaaGAAATAGAAACTTTACGGGCCAACCAAGAGCAATTGATTGCCGAAAATGAAAGATTACGAGAACAACTTTCCATTGAGTCATCCGTACCAAAATCAGTAGTTACAGATTTCTGTACAACAGCAGTTAATAACAAGTTTTCGATTGATGGACCTGCCGTGTCCAATAGACACCCTCTGCAGAAGGGCAAACGGAGTCGAATATCTTGTTTGATGCTCTGTTATCAGATTCTGTTCCTATTACTGACCATTCCATCCTACATGATCTCAAGCTTCCAGAGGACGATGATGATATGGATTGGCTTGACAACAATGTTTCAAAACGTTTGGAGAAAATTGCTGATGAACTACTCGGCGaaaGTTTCCTTAATGAATGTTCTCTTGATGAAATGGTGGGGGACACATCAGAAGTCATGGAACCCGgtcaaaatattgatttacccAATGCAaacataa
Protein Sequence
MAPNIIRPSQMLIFNSAMCYVKQRQHSAAGDVGGGSSMSPKSPPAKRTYVKNISPEEKILRKKLRNREAAQLSRDKKKAQFNILSGMVHGLRKENVHLKEEIETLRANQEQLIAENERLREQLSIESSVPKSVVTDFCTTAVNNKFSIDGPAVSNRHPLQKGKRSRISCLMLCYQILFLLLTIPSYMISSFQRTMMIWIGLTTMFQNVWRKLLMNYSAKVSLMNVLLMKWWGTHQKSWNPVKILIYPMQT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01303938;
90% Identity
iTF_01303938;
80% Identity
-