Agos003727.1
Basic Information
- Insect
- Aphis gossypii
- Gene Symbol
- Xbp1
- Assembly
- GCA_004010815.1
- Location
- NW:868516-873586[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-13 8.6e-11 41.2 8.4 1 64 52 115 52 116 0.95 2 2 0.03 21 4.7 1.6 36 56 101 121 100 124 0.78
Sequence Information
- Coding Sequence
- ATGGCGCCAAACATTATTCGGCCTAGTCAAATGTTGATATTCAACTCTGCCATGTGTTATGTGAAACAGCGACAGCATCCAGCCGCTGGAGACGTCGGCGGCGGATCGCCGAAATCGCCGCCGGCCAAGCGGACGTACGTAAAAAACATCTCGCCCGAAGAGAAAATATTACGCAAgaAATTACGAAACAGAGAAGCAGCACAATTATCTAGAGATAAAAAGAAagcacaatttaatattttatcgggAATGGTTCATGGTTTAAGAAAAGAGaatgTACATTTAAGAGAAGAAATAGAAACTTTAAGGGCCAACCAAGAGGAATTGATCGCCGAAAATGAAAGATTACGAGAACAACTTTCCACTGAGTCATCCATACCAAAATCAGTAGTTACAGAATTCTGTACATCAGCAGTTAATAACAAGTTTTCGATTAATGGACCTGCCGTGTCCAATAGACACCCTCTGCAGAAGGGCAAACGGAATCGAACATCTTGTTTGATGCTCTGTTATCAGATTCTGTTCCTATTACTGACCATTCCATCCTGCATGATCTCAAGCTTCCAGACGACGATGATGATATGGACTGGCTTGATAACAATGTTTCAAAGCGTTTGGAGAAAATTGCTGATGAACTACTCGGCgaaagTTTCCTTAATGAATGTTCTCTTGATGAAATGGTGGGGAGCACATCAGAAATCATGGAATCCggccaaaatattaatttacccaATGCAGACATAA
- Protein Sequence
- MAPNIIRPSQMLIFNSAMCYVKQRQHPAAGDVGGGSPKSPPAKRTYVKNISPEEKILRKKLRNREAAQLSRDKKKAQFNILSGMVHGLRKENVHLREEIETLRANQEELIAENERLREQLSTESSIPKSVVTEFCTSAVNNKFSINGPAVSNRHPLQKGKRNRTSCLMLCYQILFLLLTIPSCMISSFQTTMMIWTGLITMFQSVWRKLLMNYSAKVSLMNVLLMKWWGAHQKSWNPAKILIYPMQT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01303938;
- 90% Identity
- iTF_01303938;
- 80% Identity
- -