Basic Information

Insect: Rhimphoctona megacephalus
Gene Symbol: znf423
Assembly: GCA_963989365.1
Location: OZ022419.1:14009648-14029262[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 8.7e-06 0.0012 19.9 1.5 1 23 97 119 97 119 0.98

2 22 0.21 30 6.1 4.9 1 23 125 147 125 147 0.98

3 22 1.1e-06 0.00016 22.7 4.1 1 23 153 175 153 175 0.99

4 22 0.00023 0.033 15.4 0.2 1 23 181 203 181 203 0.99

5 22 0.0004 0.056 14.7 0.3 1 23 366 389 366 389 0.97

6 22 0.27 38 5.8 0.0 2 23 400 422 399 422 0.88

7 22 0.21 30 6.1 0.1 3 23 492 512 491 512 0.97

8 22 0.0025 0.35 12.2 0.0 3 23 528 548 527 548 0.96

9 22 0.00069 0.099 13.9 2.2 1 23 557 580 557 580 0.94

10 22 2.4 3.4e+02 2.8 0.1 1 23 585 608 585 608 0.91

11 22 6.8 9.6e+02 1.4 0.1 10 23 637 651 635 651 0.95

12 22 1.2 1.6e+02 3.8 2.2 2 23 678 699 678 699 0.96

13 22 0.0004 0.057 14.7 0.4 1 23 704 727 704 728 0.95

14 22 1.4 2e+02 3.5 0.1 2 23 796 819 795 819 0.88

15 22 4.6e-05 0.0066 17.6 1.0 2 23 835 857 834 857 0.96

16 22 1.1 1.6e+02 3.8 0.6 1 12 866 877 866 889 0.76

17 22 0.81 1.2e+02 4.3 0.1 2 23 897 918 896 918 0.96

18 22 0.00038 0.055 14.7 0.1 1 23 1096 1119 1096 1119 0.97

19 22 0.33 47 5.5 0.4 1 23 1129 1152 1129 1152 0.94

20 22 4.3 6.2e+02 2.0 0.2 2 23 1164 1185 1163 1185 0.93

21 22 0.0043 0.62 11.4 1.1 2 23 1194 1216 1193 1216 0.94

22 22 0.14 20 6.7 1.4 1 23 1223 1246 1223 1246 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	8.7e-06	0.0012	19.9	1.5	1	23	97	119	97	119	0.98
2	22	0.21	30	6.1	4.9	1	23	125	147	125	147	0.98
3	22	1.1e-06	0.00016	22.7	4.1	1	23	153	175	153	175	0.99
4	22	0.00023	0.033	15.4	0.2	1	23	181	203	181	203	0.99
5	22	0.0004	0.056	14.7	0.3	1	23	366	389	366	389	0.97
6	22	0.27	38	5.8	0.0	2	23	400	422	399	422	0.88
7	22	0.21	30	6.1	0.1	3	23	492	512	491	512	0.97
8	22	0.0025	0.35	12.2	0.0	3	23	528	548	527	548	0.96
9	22	0.00069	0.099	13.9	2.2	1	23	557	580	557	580	0.94
10	22	2.4	3.4e+02	2.8	0.1	1	23	585	608	585	608	0.91
11	22	6.8	9.6e+02	1.4	0.1	10	23	637	651	635	651	0.95
12	22	1.2	1.6e+02	3.8	2.2	2	23	678	699	678	699	0.96
13	22	0.0004	0.057	14.7	0.4	1	23	704	727	704	728	0.95
14	22	1.4	2e+02	3.5	0.1	2	23	796	819	795	819	0.88
15	22	4.6e-05	0.0066	17.6	1.0	2	23	835	857	834	857	0.96
16	22	1.1	1.6e+02	3.8	0.6	1	12	866	877	866	889	0.76
17	22	0.81	1.2e+02	4.3	0.1	2	23	897	918	896	918	0.96
18	22	0.00038	0.055	14.7	0.1	1	23	1096	1119	1096	1119	0.97
19	22	0.33	47	5.5	0.4	1	23	1129	1152	1129	1152	0.94
20	22	4.3	6.2e+02	2.0	0.2	2	23	1164	1185	1163	1185	0.93
21	22	0.0043	0.62	11.4	1.1	2	23	1194	1216	1193	1216	0.94
22	22	0.14	20	6.7	1.4	1	23	1223	1246	1223	1246	0.96

Sequence Information

Coding Sequence: ATGCTTTTTAAAGGAAATAGTTCGCGATTGGAATTACTGATCGGTAAGATCCAAGCACATAAGGAATCACCGTCGCCACCTCGAGCTGACAAATGCAGCCCCAGATCCAAAGATGCACTGGGTACCGGAAGTTCATCTTGGCACAGCGAAGATGGTGGAACAAATTCGCGCCGCGGTGGGGAAACACCATCATCCTGCGCAACTCCAACATCGGCGAGTTTTCCGTCGGAACCGGAAGTCGATCCGGAAATCGGTATTAGTGCCGATAGTAACAATCCTGCGGCTCCTTATCCCTGCCAATTTTGCGATAGGACTTTTCCTCGACTTAGTTACTTGAAGAAACATGAGCAGAGTCACGGTGATCAAATGCCGTACCGTTGCAGTTGGTGCTCGCGTTTGTTCAAGCACAAGCGAAGCAGAGATCGTCACGTAAAGTTGCACACCGGTGATCGAAGATATCGTTGTTCTCATTGCGAGGCTGCGTTTTCCAGAAGCGATCATCTGAAGATTCACATGAAAACGCACGACAATCAGAAGCCTTATCAATGTACAGCATGTTCGCGAGGTTACAATACAGCGGCAGCCTTAACATCGCACATGCAATCACACAAGAAGCATCCAAGTCCGAATCAGACTACGAAATTGGACATGGATTATGGACGTCGAAGTGTCTCGTCACACAGCACAGCTTCACCTCCCATTCAAAATTCACCATCTCCCAGTTTGAATCTTAGTATGAAcgtgaaaaattcaatgaagtCTCATCAATCGATTTATAACAACGGGACGAGTGGATCGAAAACTCCAATTATAAATTCGCCATTAAAGCTCGCTTGTATGTATTGTACGAAGGACTCTTTTACGAGTATGCAACAATTACAGATGCACGTTCACGCGATGCATCAAGCGATTCTAAACGGCGCGAGTTTGAATGTCGAATCATTGAGTCACATTAAGTCGGAAGCGAATAATTCAAAGTGCCGCGATCAATTGATCGTGGATAGAAACAGTAGCAATGATAATGAGAGAACGTATCATCGTGAGGAACGCGAAAAGTCCTTGGAAAGGGACAAAGGAAGTGCAGTGGAAAAGGGTTTTTCCTGTGGCCAATGTACGATGAAATTCTCTGGACTCAGCGAGCTGAGAGACCACATGGTAACAATTCATCGAAGTGACAATTTCAGCTCGACCCTAATGATGTGTCCTCTGTGTGGAATCCCCTGTGCCTCAGCCGCCTCTTACGCGGAACACTACGTGCTCCAGCACTGTGAGAACCGACGATTTATTTCGAAAGATTCGATCCATCGCGATTGGGATAGTACGAAGATCAACGGAAGCCATGAAAACAGTCGGCCTGGCTCAGAGGATCACGCTATGACGAGCAGATCTGATCTTGGAACTTCGGAGCCCGCTGATTTGACGAAAAAACACTCGAGAGCCGGTGACACTGGCTACACAACTGGTACACTCCTTTGTGGACAATGTGGTGCTGCGCTGAAGGACTTTGAATCATTCCGTGAACACCTAGCTCGCCATCTTCAAGCTGATCAACAAAGCAGCGAAGTATTACCCAGAAATCCATGTCCAAAATGTGGTGCAAGCTTCCCAGAACGGGAGGACATGTTAGCTCATCTAACGAAACATTATCTTGGCCAAGTGACGAAAGAATACACGTGTGGTGCTTGCAAAAAGTGTTATCCCCATCCGGACCTCTTGCAACGGCATCTTCTTGATACTCACGCTCATCATCTGTACCGATGCGCCGTTTGTCGCGACACCTTTGATTCCCGAGTAGCCATACAGGTTCACTTCGCTGTAAAACACAGTCAGGAATGCCAAGTTTATCGTTGCAATGTGTGCACCAACGAGAATTCACCTGGAAATTCACCCGGTGAAGGAAGAAATTACTTTCGCACTGAATCAGAAATGGCCAATCACGTTAGATCGATTCACGCGCTGCCTAACGTCGTCAATGAAAGTCCTTTGCGAAGAAGTCCCGTACCAACACCCATCGCCAACCCACCCACTCCTAGATGCGTTTTTTGTGGCGTCTGCTGCAACACCGATTTGGAACTACAACTTCATCTGGCGAGCCATTCGGTCAATTTATATCGATGTCCTATTTGTAGGGAAGGATTTTCGGTTGAGTTCCTATTAGAGAGACACATTGCACAAACGCATCACGCCATCAGTGACCGGAATGATGGAAGAGAAAATGGAAGAACGTTTAGAGCGTCGAGGTCACTGGATGATACGACAAGATCCCAAAAACGAGGACGATCGCCAGCTTCGAGTAACAACAATTCGTTGAATCAATGTGACAACAATAACAAACGACCGAATTATGGAGTGACTAATGGTACGTCTATGACTTCGGGTGTTCAGCAATGCGAGCTTTGTGAGAGGGCAGAATTTGCAACAGAAGCAGAGCTTCAGGCGCACAAAAAATTAGTTCACACGCCGATCAAGTTGCAGGCAAAGTCGTTACCATTGCTCAGTATGACTTGCGCATACTGCGGCGAGGTTTGTCGTTCACGAAGCGATTTGGAGTCGCACACGAGAATCCAGCACGCTTCGAATGAGCCTGGTGGACGTCACAAGTGTAATATTTGCGACGAGGTCTGTCCGTCCGGTGGAATACTGGCGGAACACAAACTTCAGACACATTGCAAAATTCAATTGAGCGATACTTGTGTCGTATGTCGTGGGACTTTAGCCAATGAGTCTCAGTTCATCGAACACGTTCAACGACATAGTTTGGAAGGTGGCGAATCTCAGCAACGATTGGACAGTACGATGCCTCTTTTACCTGCCGCCTGCGTCGTTTGCAGACAAACATTGATCAGCGATCTGGAATGTCGCCTTCATGCGAGCCATCATTTGAGAAACGCCAATGGTTCACAAATCGCCAATTCCAGTCCAAGTCCCAATCAGCACAAAACGCAACAGCAACAATTGTTCCAGCCAACCACATTGAGCTGTTGTCTTTGTTTGCGAGAATTCAATACCGATGATTTTGTCAGTTTACCATCGAATCCCGTGGGCACCGGAGGTCCACCTTTGAGAGTGTGCAAACCCTGTTACGTCAGACACTCCCAAGGATTACCCATACTCAATTCCCCCTATGAACACGTCAGAAAATCTAATACCGAACGAAACAACTGGATTAATGGCAAGGACCAAACCAGTAGAGAAACTTCCAGAGAACAATGGGACGTCGATAGATCCTTTAATATCGGAGATACCCATCAAAGTGCCAAAACAAGAATGATTGATTCGGATGACTTTAGATGTGATGAGTGCGGTATCAAATTTGAAAACTCTGATGAAGCTGAGATTCACAGGATGAAAGAACATGGAAAAATTGGAGGAAACTCTAATACTTATACCTGCATACAATGTCAGATGTCTTTTCCGACTGAAGAAAAAATTCGGCAACACGTAAAACAAGTTCATTTGGAATCGCCTAAAGCATTGATAGACGCACTTCGTTGTCATCTTTGTGTCTTCGAAGCTAGCAGTCCTCTTCAGCTTCAAGGACATTTGATCGAGCATACCTTCGCAGGTTGTGCGGGTCTCACGTGCTACATTTGCCAGAGTCTTTTTACAACGCCTCATGCTCTTCAGAATCACATGCTCCAGCAGCATGGACTCGGGGCGAGGCCCTACGACTGCAATAATTGCAGCCTAAAATTTTTCTTCCGCATCGAATTGGACCATCACGTGATGATGGCACATCGAAGAAACGAGGTGGCATCGCCCACTGTGGACGTTGGACAGGAAATGGCAACGGAGAATGAAACGATCATGGAACTGGAAAACCGGAGCAAGAAAGAAACGATTAAAGAAAATCCCGAGGGCAACACTTGTACGAAAATGATTACGGTAAAGGAGGAAATCGTTCATAGTCCcgatgaaaatgaatttcacgTTGACGATAATGTCGAACAAGATGACGACGAAGAAGCAAAAGGGAAGAAATCAAATTTGGTGGAAACGAAAACTGAAACGTTTGGAATATCTCACGGGGAAGACAAGATACAATCTTGA
Protein Sequence: MLFKGNSSRLELLIGKIQAHKESPSPPRADKCSPRSKDALGTGSSSWHSEDGGTNSRRGGETPSSCATPTSASFPSEPEVDPEIGISADSNNPAAPYPCQFCDRTFPRLSYLKKHEQSHGDQMPYRCSWCSRLFKHKRSRDRHVKLHTGDRRYRCSHCEAAFSRSDHLKIHMKTHDNQKPYQCTACSRGYNTAAALTSHMQSHKKHPSPNQTTKLDMDYGRRSVSSHSTASPPIQNSPSPSLNLSMNVKNSMKSHQSIYNNGTSGSKTPIINSPLKLACMYCTKDSFTSMQQLQMHVHAMHQAILNGASLNVESLSHIKSEANNSKCRDQLIVDRNSSNDNERTYHREEREKSLERDKGSAVEKGFSCGQCTMKFSGLSELRDHMVTIHRSDNFSSTLMMCPLCGIPCASAASYAEHYVLQHCENRRFISKDSIHRDWDSTKINGSHENSRPGSEDHAMTSRSDLGTSEPADLTKKHSRAGDTGYTTGTLLCGQCGAALKDFESFREHLARHLQADQQSSEVLPRNPCPKCGASFPEREDMLAHLTKHYLGQVTKEYTCGACKKCYPHPDLLQRHLLDTHAHHLYRCAVCRDTFDSRVAIQVHFAVKHSQECQVYRCNVCTNENSPGNSPGEGRNYFRTESEMANHVRSIHALPNVVNESPLRRSPVPTPIANPPTPRCVFCGVCCNTDLELQLHLASHSVNLYRCPICREGFSVEFLLERHIAQTHHAISDRNDGRENGRTFRASRSLDDTTRSQKRGRSPASSNNNSLNQCDNNNKRPNYGVTNGTSMTSGVQQCELCERAEFATEAELQAHKKLVHTPIKLQAKSLPLLSMTCAYCGEVCRSRSDLESHTRIQHASNEPGGRHKCNICDEVCPSGGILAEHKLQTHCKIQLSDTCVVCRGTLANESQFIEHVQRHSLEGGESQQRLDSTMPLLPAACVVCRQTLISDLECRLHASHHLRNANGSQIANSSPSPNQHKTQQQQLFQPTTLSCCLCLREFNTDDFVSLPSNPVGTGGPPLRVCKPCYVRHSQGLPILNSPYEHVRKSNTERNNWINGKDQTSRETSREQWDVDRSFNIGDTHQSAKTRMIDSDDFRCDECGIKFENSDEAEIHRMKEHGKIGGNSNTYTCIQCQMSFPTEEKIRQHVKQVHLESPKALIDALRCHLCVFEASSPLQLQGHLIEHTFAGCAGLTCYICQSLFTTPHALQNHMLQQHGLGARPYDCNNCSLKFFFRIELDHHVMMAHRRNEVASPTVDVGQEMATENETIMELENRSKKETIKENPEGNTCTKMITVKEEIVHSPDENEFHVDDNVEQDDDEEAKGKKSNLVETKTETFGISHGEDKIQS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00829754;
90% Identity: iTF_00265959;
80% Identity: -