Ccap015223.1
Basic Information
- Insect
- Campoplex capitator
- Gene Symbol
- znf423
- Assembly
- GCA_037576405.1
- Location
- JARBWI010000322.1:8548784-8561385[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 5.2e-05 0.0057 17.4 1.5 1 23 97 119 97 119 0.97 2 21 0.2 22 6.1 4.9 1 23 125 147 125 147 0.98 3 21 1.1e-06 0.00012 22.7 4.1 1 23 153 175 153 175 0.99 4 21 0.00022 0.024 15.4 0.2 1 23 181 203 181 203 0.99 5 21 0.00038 0.042 14.7 0.3 1 23 367 390 367 390 0.97 6 21 0.25 28 5.8 0.0 2 23 401 423 400 423 0.88 7 21 0.2 23 6.1 0.1 3 23 493 513 492 513 0.97 8 21 0.0023 0.26 12.2 0.0 3 23 529 549 528 549 0.96 9 21 0.00066 0.074 13.9 2.2 1 23 558 581 558 581 0.94 10 21 2.3 2.5e+02 2.8 0.1 1 23 586 609 586 609 0.91 11 21 1.1 1.2e+02 3.8 2.2 2 23 679 700 679 700 0.96 12 21 0.0011 0.13 13.2 0.2 1 23 705 728 705 729 0.95 13 21 1.4 1.5e+02 3.5 0.1 2 23 797 820 796 820 0.88 14 21 4.4e-05 0.0049 17.6 1.0 2 23 836 858 835 858 0.96 15 21 0.93 1e+02 4.0 0.4 1 12 867 878 867 890 0.76 16 21 2.9 3.3e+02 2.4 0.0 2 23 898 919 897 919 0.95 17 21 0.0063 0.71 10.8 0.2 1 23 1098 1121 1098 1121 0.95 18 21 0.14 16 6.6 0.4 1 23 1131 1154 1131 1154 0.95 19 21 4.1 4.6e+02 2.0 0.2 2 23 1167 1188 1166 1188 0.93 20 21 0.0041 0.46 11.4 1.1 2 23 1197 1219 1196 1219 0.94 21 21 0.13 15 6.7 1.4 1 23 1226 1249 1226 1249 0.96
Sequence Information
- Coding Sequence
- ATGCTTTTTAAAGGCAATAGTTCGCGATTGGAATTGCTCATCGGTAAGATCCAAGCACACAAGGAATCACCGTCGCCACCTCGACCTGACAAGTGTAGCTCCAGATCCAAAGATGCACTGGGTACCGGAAGCTCATCTCGGCACAGCGAAGATGGTGGAACGAATTCGCGTCGCGGTGGAGAAACTCCATCGTCTTGCGCGACTCCAACATCGGCCAGTTTTCTGTCTGAACCGGAAGTCGATCCGGAAATGGGCATCAGTCCCGATGGCAATAATCCCGTCGCTCCTTATCCATGTCAATTTTGCGAGAGGACTTTTCCTCGACTTAGTTACTTGAAGAAACATGAGCAGAATCACGGTGATCAAATGCCGTACCGTTGCAGTTGGTGTTCGCGTTTGTTCAAGCACAAGCGGAGCAGAGATCGTCACGTTAAATTGCACACCGGTGATCGAAGATATCGTTGTTCTCATTGCGAGGCTGCATTTTCCAGAAGCGATCATCTGAAGATCCACATGAAAACGCACGACAATCAAAAGCCTTATCAGTGTACAGCGTGCTCGCGAGGTTACAATACAGCGGCAGCATTGACATCGCACATGCAATCACACAAAAAACATCCAAGTCCGAATCAGACAACGAAATTGGAGATGGATTATGGACGTCGGAGTGTTTCGTCGCACAGTACAGCATCACCACCCATTCAAAATTCACCATCTCCCAGTTTGAATCTTAGTATGAACGTGAAGAATACGATGAAGTCGCATCAATCGATTTATAACAGCGGGACGAATGGAGCGAAAACCTCATTGATAAATTCGCCTCTGAAGCTCGCTTGTATGTATTGCACGAAGGATTCTTTTACGAGTATGCAACAATTGCAGATGCACGTTCACGCGATGCATCAAGCGATTTTAAACGGCGCGAGCTTGAACGTCGAATCACCGAGTCACGTTAAGTCGGAACCGAATAATTCAAAATGCCACGATCAATCAATCGTTAATAGAAACAGTAACAATGACAACGGGAGAACTTATCATCGTGAGGAACGCGAAAAGTCATTGGAAAGGGATGGGAAAGGAAGTACAATGGAAAAAGGTTTTTCCTGTGGTCAATGTACGATGAAATTCTCTGGACTCAGCGAGCTCAGAGACCACATGGTAACGATCCATCGAAGTGAGAATTTTAGCTCGACCCTGATGATGTGCCCACTGTGTGGAATCCCCTGTGCCTCAGCCGCCTCTTATGCGGAACACTACGTGCTCCAGCACTGTGAAAACCGACGATTTACTCCTAAGGAATCGATCCATCGCGATTGGGAAAGTACGAAGATCAACGGAAGCCATGAAAACAGTCGGCCCGGCTCTGAAGACCATGCCATGACGAGCAGATCTGATCTTGGAACTTCGGAGCCCGCtgatttgacgaaaaaacaatcaagAGCCAGCGACACTGGCTACTCAACCGGTACACTACTCTGTGGGCAATGTGGCGCTGCGCTAAAGGACTTTGAATCATTCCGCGAACACTTAGCTCGCCATCTTCAAGCTGATCAACAAAGCAGCGAAGTATTACCCAGAAATCCATGTCCAAAATGTGGCGCAAGCTTCCCGGAACGAGAGGACATGTTAGCCCATCTGACGAAACACTATCTCGGCCAAGTAACGAAAGAGTATACGTGTGGTGCTTGCAAAAAGTGTTACCCCCATCCGGACCTCTTGCAACGGCATCTTCTCGACACTCACGCTCATCACTTCTACCGATGCGCCGTTTGTCGTGACACCTTCGATTCCCGGGTAGCCATACAGGTTCACTTCGCCGTCAAACACAGCCAGGAATGCCAAGTTTATCGCTGCAATGTGTGCACCAATGAAAATTCACCTGGCAGTTCACCCGGTGAAGGAAGAAATTACTTTCGCACTGAAGCAGAAATGGCCAATCACGTTAGATCGATCCACGCGCCGCCTAATGTCGTCAATGAAAGTCCTTTGCGAAGAAGTCCTCTACCTACACCCATCGCCAATCCAACTACTCCCAGATGCGTATTTTGCGGTGTCTGCTGCAACACGGATCTGGAACTACAGCTTCATCTGGCGAGCCATTCGGCCAATTTGTATCGATGTCCCATTTGTCGGGAAGGATTCCCGGTCGAGTTTCTCTTAGAGAGACACATTGCACAAACACATCATGCCATCAGTGACCGAAGTGatggaagagaaaatggaaGAACGTTCAGAGCGTCGAGGTCGCAGGATGATACGACAAGAGCCCAAAAACGAGGTCGATCTCCAGCTTCGAGCAACAACAATTCTTTGAATCAAtgcgacaacaacaacaaacgaCCGAATTATGGAGTTACCAACGGTAGCTCTATGGCATCGGGTGTTCAACAATGCGAGCTTTGTGAAAGGGCAGAATTCGCAACGGAAGCAGAGCTCCAGGCGCACAAAAAGTTGGTTCATACGCCTATCAAGCTTCAGTCGAAGTCGTTACCATTGCTCAGTATGACTTGCGCATATTGTGGCGAGGTTTGTCGTTCGCGAAGTGATTTGGAGTCGCATACGAGAATTCAGCACGCTTCGAACGAGCCTGGTGGACGTCACAAGTGTAACATTTGCGACGAGGTTTGCCCGTCCGGTGGAATACTGGCGGAACACAAACTCCAGATCCATTGCAAAATTCAATTGAGCGATACTTGCGTCGTATGTCGTGGGACTTTAGCCAATGAGGCCCAGTTCATCGAACACGTTCAACGACATAGTCTGGAAGGTGGTGAAACCCACCAGCAACGATTGGACAGCACGATGCCTCTTCTACCTGCAGCTTGTGTTGTTTGCAGGCAAACATTGATCAGTGATTTGGAATGTCGCCTCCACGCGAGTCACCATTTGAGAAACGCTAATAGCTCACAAATTACAAATTCCAGTCCAAGTCCCAATCAGCATAAAACTCAACAGCAGCAACTCTTTCAGCCAAGCAACTTGAGCTGTTGTCTCTGCCTGCGAGAATTCGGTGTCGATGACTTTGTCAGTTTGCCATCGAATCCCGTCGGCACTGGAGGTCCACCTCTGAGAGTTTGCAGGCCCTGTTACGTCAGACACTCCCAAGGATTACCCATACTCAACTCCCCCTATGAACACGTCAGAAAATCCAATACCGAACGAAATAACTGGATCAATGGCAAGGACCAGACAAGCAGGGAAGCTTCCAGAGAACAATGGGATGTCGACAGATCCTTTAATGTTGGTGACTCCCATCAGAGTTCCAAAACAAGAATCCTTGATTCGGATGACTTCAGATGCGACGAGTGCGGtatcaaatttgaaagttCTAACGAAGCTGACATTCACAGAATGAAGGAACATGGGAAAATCGGAGGAAACTCTAATACTTATACCTGCATACAATGCCAGATGTCTTTTCcgactgaagaaaaaattcggcaGCACGTGAGACAAGTGCATTTGGAATCTCCTAGTAAAGCATCGATAGACGCGCTCCGTTGTCATCTCTGTGTCTTCGAAGCTAGCAGTCCTCTTCAGCTTCAAGGACATTTGATCGAGCATACCTTCGCAGGTTGCGCGGGTCTCACGTGCTACATTTGCCAGAGTCTTTTCACAACGCCTCACGCTCTTCAGaATCACATGCTCCAGCAGCACGGACTGGGTGCGAGGCCCTACGACTGCAATAACTGCAgcctcaaatttttcttccgcATCGAATTGGACCACCATGTGATGATGGCACATCGACAAAGCGAGGTGTCATCGCCCACTGTGGACGTTGGACAGGAAATGACAACGGAGAATCAAACGAGTATGGAGGCGGAAATCCGGAACAAGAAAGAAACGATTGAAGAGAATCCCGAGGGTAGCACTTGTCCAAAAGTGATAACCGTAAAGGAGGAAATCGTTCATAGTCCCGATGAGAAAGAATTTCACGTTGACGATGATGTCGAAGAAGGTGATGACGACGAAGCAAAAGGCGAGAAATCACATTTGatggaaacgaaaattgaaacgtttgGAATATCGCACGGAGAAGACAAGATGCAATCTTGA
- Protein Sequence
- MLFKGNSSRLELLIGKIQAHKESPSPPRPDKCSSRSKDALGTGSSSRHSEDGGTNSRRGGETPSSCATPTSASFLSEPEVDPEMGISPDGNNPVAPYPCQFCERTFPRLSYLKKHEQNHGDQMPYRCSWCSRLFKHKRSRDRHVKLHTGDRRYRCSHCEAAFSRSDHLKIHMKTHDNQKPYQCTACSRGYNTAAALTSHMQSHKKHPSPNQTTKLEMDYGRRSVSSHSTASPPIQNSPSPSLNLSMNVKNTMKSHQSIYNSGTNGAKTSLINSPLKLACMYCTKDSFTSMQQLQMHVHAMHQAILNGASLNVESPSHVKSEPNNSKCHDQSIVNRNSNNDNGRTYHREEREKSLERDGKGSTMEKGFSCGQCTMKFSGLSELRDHMVTIHRSENFSSTLMMCPLCGIPCASAASYAEHYVLQHCENRRFTPKESIHRDWESTKINGSHENSRPGSEDHAMTSRSDLGTSEPADLTKKQSRASDTGYSTGTLLCGQCGAALKDFESFREHLARHLQADQQSSEVLPRNPCPKCGASFPEREDMLAHLTKHYLGQVTKEYTCGACKKCYPHPDLLQRHLLDTHAHHFYRCAVCRDTFDSRVAIQVHFAVKHSQECQVYRCNVCTNENSPGSSPGEGRNYFRTEAEMANHVRSIHAPPNVVNESPLRRSPLPTPIANPTTPRCVFCGVCCNTDLELQLHLASHSANLYRCPICREGFPVEFLLERHIAQTHHAISDRSDGRENGRTFRASRSQDDTTRAQKRGRSPASSNNNSLNQCDNNNKRPNYGVTNGSSMASGVQQCELCERAEFATEAELQAHKKLVHTPIKLQSKSLPLLSMTCAYCGEVCRSRSDLESHTRIQHASNEPGGRHKCNICDEVCPSGGILAEHKLQIHCKIQLSDTCVVCRGTLANEAQFIEHVQRHSLEGGETHQQRLDSTMPLLPAACVVCRQTLISDLECRLHASHHLRNANSSQITNSSPSPNQHKTQQQQLFQPSNLSCCLCLREFGVDDFVSLPSNPVGTGGPPLRVCRPCYVRHSQGLPILNSPYEHVRKSNTERNNWINGKDQTSREASREQWDVDRSFNVGDSHQSSKTRILDSDDFRCDECGIKFESSNEADIHRMKEHGKIGGNSNTYTCIQCQMSFPTEEKIRQHVRQVHLESPSKASIDALRCHLCVFEASSPLQLQGHLIEHTFAGCAGLTCYICQSLFTTPHALQNHMLQQHGLGARPYDCNNCSLKFFFRIELDHHVMMAHRQSEVSSPTVDVGQEMTTENQTSMEAEIRNKKETIEENPEGSTCPKVITVKEEIVHSPDEKEFHVDDDVEEGDDDEAKGEKSHLMETKIETFGISHGEDKMQS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00829754;
- 90% Identity
- iTF_00266689; iTF_00263747; iTF_00262872; iTF_01509109; iTF_01299518;
- 80% Identity
- -