Rbic001815.2
Basic Information
- Insect
- Rhamnusium bicolor
- Gene Symbol
- Arid5a
- Assembly
- GCA_029963845.1
- Location
- JANEYF010000167.1:945779-950132[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1 2e+04 -1.9 0.0 32 49 10 27 10 43 0.83 2 2 6.9e-25 6.8e-21 76.5 0.0 2 89 119 204 118 204 0.94
Sequence Information
- Coding Sequence
- ATGATGAAAAGATTGGAAGatgttgaaaatttgtatttaaaatacaaaatcgtAAATGCACTTGGAGGATTCTATGTGATACATCCCAATACAAGAGTTCTCTTTTGCAAAGAAACATTCGATTATCCCGAATTGGAAGGACATGAGCTACTTTGCAATCATCTTGCACCAAAACTGAAAGGCAGGCCAAGAGGAAAACGGAAAAAGCGGAGCGTTTCACCGGGCTCCGAAAGTAATGAATCGGAGTCATCTGTCACAAATAGTTACAACACAAGAGCAGAAAGTAGAAATGGTCTAGGATGCGACTCTGGTATTACACCACGCCGCAGCACCCGATGTcacgaaaataatgaaaataaagaattcgTCAGAAAACTTACCGTGTTTATGAAATCTAATCATACACCAATAGGTCGAATTCCGTCCTTAGGCTATAAAGAATtgaaTCTACATGAATTCTTTACAAAAGTACAAAAATTAGGAGGTTATGATGCTGTAACCACCAATCGTTTATGGAAATCAATATTCGATGATATGAGTGGACATCAAAATAGTACAAGCGCTGCCACAGTTATAAGACGTCATTATGAAAggtTCTTGTTGTCATATGAGCGCCACATCAAAGGAGAAGAGTACAAACCACTGCCTGTATCCGAGAGGCGAAGACTGAAAAGTAAACGGGGTAGTAGCAGTATAAGTGACGCAGAATCAAGTAGTGGTGATGCTACTCCAGTACCTTCAACATCCAGGAAGACATCTACATCAGGAAATCTTTCAGAAAATAAgGATATTAGGACAGAAGGAAAGCCCTCATCACTTAGAAGTGTTCGTGTTAAACCTGAAAGACAAAAAGATAAACAAGTTAATAGTGAAAAAGTCAGTGttcaaaacaataataacaatagtatTGATCAGCAGCCTagtgttaaaaaagaaaaagaagatagTAAACCAGAAGTTAAgcctaaaattgaaaaactgattattaaaactgaaagtatGACTGTGAAAACCGAAtatgcaaatataaaaattgagaaTACTTCAGAGAAAATTGAATGTACTACTATAAAATCAGAACAGGTGACCCTTAAATCTGAAAAGAGCCATATGAAAGCCGATATAATACCAGTAAAAGCAGAAAGTAAACCTGTAAAACTGGATCCTTCAGTTATGAAAGCGGAAATTGTACCAGTTAAAATGGAACCAATTAAGCATGAAAAGAGCGAAATCAAAATGGAAGCAGTTGCTATTAAATCAGAAAGTACAAATATTCCAGAGAAAAATGCCGAACCCTTGACCTCAGCTGCCACTCCTGTTGCACAAAAAGTTTCTCCAGATAAATTAATGTCTCCAGTTGAAGGCAAAGAAAATATCCCCCTTATTAAAACTGGAGACACCGCTACAAAGAATAGCCCGGAAATTATAGAGGTGCCATACAAACCAAAAGTACCAGAAGTTGTAAATGTAGAATCAGATGCTTACAAAGGAATAAGTAGCACGTTCATACATGAAGTTAAAAAGAGGAAACTCGATATATTAAAAGAGGGTGGCCTTGAAGTAACCCCAGTGAGGCCAACTATGACAAACCTGCCTAATAAAGATGGTAGACCAACAGTTATACAACAAATTACACCACCCGCACAAATAATTTCCAAACATTCTAAACAGGAAATTATGCCTCCACCTGCTATAAACACTGTACCCCCAAAACGGATGAACATAACAATTCCACAAGCTCTAAACATCAGTCAAGTTAAAGTATCTCCAGCAACTCCCATTAAACCTGTCAAGCCAGTACCAGTACCTTCCACAAATTCATTTCCATTTGCCAATCGTTCCACACCTCCAAAAGTTGTCCAATCCAAATCTATCTACTCTTATTCTGAAAAAACAGTGTATGGCAATCCAAAAGATATTTTATGTCCCACCATAAAAAGTGCTGTTCATACTCCTAAGTTTATCAGCACAATTCCTAGACAAAATGGTGGTGACCCAGTAGATCTGTCTGTAAATAGTCCACAGAAACCAATAGTGGAAATAATGCGTATTCCACAAAGTCCATCAGCAAGCTCATATACACCTTACAATCGAGACACTGTCACAAAAAACCTTTACAAAACAACTTCAACTCCAATAATGGATGGAAGGAGGCTTGGTCCAAACCTTGAAATAACATTAGTGGGTCCAAACAACAAGAATTCGACTCATAATTTGCAGAAACAATATAACTACCCACCAGCACAATTACATAGTTCTCAATCAAATAGTCAGTTTCAACATCAAAAGCGATTTTCATCGGATTATTATAGTCCGAATAAAATGTCTAAGAATGATGAAAATGGGAAGtacaacaaacatatttttctaccACCTCACAGGGATTCTAAAAGTAATATAGATATAAGTATTCCTAATCCATACACAAACAAAAGTCCAAGTATAAAAGCTGATCCAATAAACAGTCATATGAAGCAGATGTCTCAGAGTCAGTCAGCAATTAAACATTTCCCCAATCATAATTTACCAGCCTTTTCGCCATATTTAACACAAATGTATGAAGGAAACAAGGGGATACCTCCATATTTACCTCTTATAGATCCTGCGATGTATTACTCAGCTGCAATGCAGAGTTTGTACACGAGCAGCGCGTTGAGTTCGGCTGCACCAATGCTACCGATTCCCACACCAGAACAGCTTAAATTCTATACCGAACTGATGGCACATGGGAGGCTAAATTTCCCCTTTCAGTTGCCGCAGGACAGCAACCAAGCTATTAACAATAACAACCTCAAAAAACCATAG
- Protein Sequence
- MMKRLEDVENLYLKYKIVNALGGFYVIHPNTRVLFCKETFDYPELEGHELLCNHLAPKLKGRPRGKRKKRSVSPGSESNESESSVTNSYNTRAESRNGLGCDSGITPRRSTRCHENNENKEFVRKLTVFMKSNHTPIGRIPSLGYKELNLHEFFTKVQKLGGYDAVTTNRLWKSIFDDMSGHQNSTSAATVIRRHYERFLLSYERHIKGEEYKPLPVSERRRLKSKRGSSSISDAESSSGDATPVPSTSRKTSTSGNLSENKDIRTEGKPSSLRSVRVKPERQKDKQVNSEKVSVQNNNNNSIDQQPSVKKEKEDSKPEVKPKIEKLIIKTESMTVKTEYANIKIENTSEKIECTTIKSEQVTLKSEKSHMKADIIPVKAESKPVKLDPSVMKAEIVPVKMEPIKHEKSEIKMEAVAIKSESTNIPEKNAEPLTSAATPVAQKVSPDKLMSPVEGKENIPLIKTGDTATKNSPEIIEVPYKPKVPEVVNVESDAYKGISSTFIHEVKKRKLDILKEGGLEVTPVRPTMTNLPNKDGRPTVIQQITPPAQIISKHSKQEIMPPPAINTVPPKRMNITIPQALNISQVKVSPATPIKPVKPVPVPSTNSFPFANRSTPPKVVQSKSIYSYSEKTVYGNPKDILCPTIKSAVHTPKFISTIPRQNGGDPVDLSVNSPQKPIVEIMRIPQSPSASSYTPYNRDTVTKNLYKTTSTPIMDGRRLGPNLEITLVGPNNKNSTHNLQKQYNYPPAQLHSSQSNSQFQHQKRFSSDYYSPNKMSKNDENGKYNKHIFLPPHRDSKSNIDISIPNPYTNKSPSIKADPINSHMKQMSQSQSAIKHFPNHNLPAFSPYLTQMYEGNKGIPPYLPLIDPAMYYSAAMQSLYTSSALSSAAPMLPIPTPEQLKFYTELMAHGRLNFPFQLPQDSNQAINNNNLKKP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01368804; iTF_00885687; iTF_01289531;
- 90% Identity
- -
- 80% Identity
- -