Smel046408.2
Basic Information
- Insect
- Stenurella melanura
- Gene Symbol
- Arid5a
- Assembly
- GCA_963583905.1
- Location
- OY757313.1:113574446-113585206[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.6 2.4e+04 -1.9 0.0 32 49 10 27 10 43 0.83 2 3 5.2e-25 7.9e-21 76.5 0.0 2 89 119 204 118 204 0.94 3 3 3.9 5.9e+04 -3.2 0.0 52 82 675 708 649 710 0.56
Sequence Information
- Coding Sequence
- ATGATGAAGAGATTGGAGGGCGttgaaaacttatatttaaaatacaaaattgtaaatGCACTTGGTGGATTCTATGTAATACATCCCAATACGAGAGTCCTTTTCTGCAAAGAAACATTCGATTACCCTGAACTGGAGGGACATGAATTACTTTGTAATCATCTCGCACCAAAACTAAAAGGCAGGCCAAGAGGAAAACGGAAAAAACGAAGCGTGTCTCCGGGTTCGGAAAGTAATGAATCGGAATCTTCTGTTACCAACACTTACAACACAAGAGCAGAAAGCAGAAATGGTCTCGGATGCGATGCTGGCATTGCTCCACGTCGTAGCACCCGCTGtcacgaaaataatgaaaacaaagaaTTCGTAAGAAAACTTACTGTGTTTATGAAATCCAATCATACACCAATAGGTCGAATTCCGTCCTTAGGCTACAAAGAATTGAATCTTCACGAGTTTTTCACAAAAGTACAAAAATTGGGTGGTTATGATGCTGTAACCACTAATCGTTTATGGAAGTCAATATTTGATGATATGAGCGGACATCAAAATAGTACAAGCGCTGCTACAGTTATAAGACGTCATTATGAAAGGTTTTTGCTGTCATATGAGCGCCACATCAAAGGAGAAGAGTACAAACCATTACCTGTATCCGAAAGGCGAAGACTGAAGAGTAAACGAGGTAGTAGCAGTATAAGTGATGCCGAGTCGAGTAGTGGTGATGCTACCCCAGCACCCTCTACATCTAGGAAAACGTCTTTGTCAGGAACAACATCAGAAAATAAGGACGTGAGGACAGAAGGAAAGCCCTCATCGCTTAGAAGTGTTCGTGTTAAACCTGAAAGACAAAAAGATAAACAAGTTAACAGTGAAAAAGTCAGTGTtcaaaacaataacaataataatagtgtcGAACAGCAGCCTAGGgtcaagaaagaaaaggaagaaaGTAAACCAGAAGTAAAGcctaaaattgaaaaactaattattaaaacCGAAAGCATGACTGTGAAAACTGAATATGCAAACATAAAAATTGAGAGTCCCTCGGACAAAATCGAGTGTGCTTCTTTGAAAATTGAAGAGAAGGCAGTTAAATCTGAAAAGGTGTCTAGCCATATGAAAGCCGAGATAACACCTGTAAAATCTGAAACAAAACCCGTAAAACTAGATCCTTCAGTGATGAAAGCGGAAATAGTACCAGTCAAATTTGAGCCAATTAAGCAGGAAAAGAGTGAGAAAAAACCAGAGGCAGCCACTATTAAATCAGAAAGCACAAATATTCCAGAGAAAAATGCCGAACCCCTGACTTCTGCTGCTACTCCTGTTGCACAAAAGGTCTCTCCAGATAAATTATTGTCGCCAGTGGAGGGCAAAGAAAACATACCCCTGATTAAAACTGGAGATACCGCTACGAAGAATAGCCCAGAAGTTATAGAGGTACCATACAAACCGAAAGTACCAGATGTTGTAAACGTAGAATCAGATGCTTACAAGGGAATAAGTAGTACATTTATACACGAAGTGAAAAAGAGAAAATTGGATATATTAAAAGAAGGCGGTCTCGAAGTAACGCCGGTGAGACCAACTATGACAAGCCAATCTGTAAAAGATGGAAGACCAACAGTTATACAACAAATTACACCTCCAGCACAAATAATTTCCAAACCATCTAAACAAGAAATTATGCCACCACCTTCCATAAATACCGTTCCTCCAAAGCGCATGCACATAACAATTCCACAAGCCCTAAATATTAGTCAAGTCAAAGTAGCCGCATCGACTCCAATGAAACCTGTCAAGCCAGTACCTGTACCTTCCAcgaattcattttcattttccaacGGCTCCACACCTCCAAGAGTAGTGCAATCAAAGTCCATTTACTCCTATTCTGAAAAAACAGTGTATGGCAACCCAAAAGACATTCTAACCCCTGCCATAAAAAACGCTGTTCACACCCCTAAGTTTATCAGTACCATTCCCAGGCAAAATGGTGGTGACCCGGTGGATTTGTCAGTAAATAGTCCACAGAAACCCGTAGTGGAGATAATGCGCATCCCGCAAAGTCCTTCATCAAGCTCGCCGTACAATAGAGACACTGTCACTAAGAACCTTTATAAAACTACCTCAACTCCTATAATGGATGGAAGGCGATTGGGTCCAAACCTCGAAATAACCCTAGTGGGGGGTCCAAACAAGAGTTCTACCCATAACTTGCCAAAACCCTTCAGCTACCCACCAGCACAATTACAAAGTTCTCATTCTAGTAATCAATACCAACAACAGAAGCGCATGTCATCGGATTATTACAGTCCTAACAAGATTTCAAAGAATGATGAAAACGGAAAGTATAATAAACACGTTTTCCTACCTCCCCAGAGGGAATCCAAAGCTAATATAGATATAAGTAGTATTCCCAATCTGTACACAAGTAAAAACTCAAGTATGAAATCAGATCCAATAAATAGTCACATGAAGCAAATGTCTCAAAACCAGTCACCTATGAAACATTTTTCAAGCCCTAATATGCCCACTTATTCACCATATTTGACCCAAATGTACGAAGGCAACAAGGGAATGTCTCCTTATTTACCTTTGATCGATCCCGCTATGTATTACTCGGCTGCGATGCAAAGTCTGTACTCCAGTAATGCATTGAATTCGGCTCCACCTATGCTGCCGATTCCAACTCCAGAACAGCTTAAATTTTATACCGAGCTGGTGGCTCACGGAAGGCTGAATTTCCCGTTTCAGTTACCTCAAGACGGCAACCAGTCAACGATTAACAATAACCACCTCAAGAAACCATAG
- Protein Sequence
- MMKRLEGVENLYLKYKIVNALGGFYVIHPNTRVLFCKETFDYPELEGHELLCNHLAPKLKGRPRGKRKKRSVSPGSESNESESSVTNTYNTRAESRNGLGCDAGIAPRRSTRCHENNENKEFVRKLTVFMKSNHTPIGRIPSLGYKELNLHEFFTKVQKLGGYDAVTTNRLWKSIFDDMSGHQNSTSAATVIRRHYERFLLSYERHIKGEEYKPLPVSERRRLKSKRGSSSISDAESSSGDATPAPSTSRKTSLSGTTSENKDVRTEGKPSSLRSVRVKPERQKDKQVNSEKVSVQNNNNNNSVEQQPRVKKEKEESKPEVKPKIEKLIIKTESMTVKTEYANIKIESPSDKIECASLKIEEKAVKSEKVSSHMKAEITPVKSETKPVKLDPSVMKAEIVPVKFEPIKQEKSEKKPEAATIKSESTNIPEKNAEPLTSAATPVAQKVSPDKLLSPVEGKENIPLIKTGDTATKNSPEVIEVPYKPKVPDVVNVESDAYKGISSTFIHEVKKRKLDILKEGGLEVTPVRPTMTSQSVKDGRPTVIQQITPPAQIISKPSKQEIMPPPSINTVPPKRMHITIPQALNISQVKVAASTPMKPVKPVPVPSTNSFSFSNGSTPPRVVQSKSIYSYSEKTVYGNPKDILTPAIKNAVHTPKFISTIPRQNGGDPVDLSVNSPQKPVVEIMRIPQSPSSSSPYNRDTVTKNLYKTTSTPIMDGRRLGPNLEITLVGGPNKSSTHNLPKPFSYPPAQLQSSHSSNQYQQQKRMSSDYYSPNKISKNDENGKYNKHVFLPPQRESKANIDISSIPNLYTSKNSSMKSDPINSHMKQMSQNQSPMKHFSSPNMPTYSPYLTQMYEGNKGMSPYLPLIDPAMYYSAAMQSLYSSNALNSAPPMLPIPTPEQLKFYTELVAHGRLNFPFQLPQDGNQSTINNNHLKKP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01295770;
- 90% Identity
- iTF_00885687;
- 80% Identity
- -