Rmor025516.1
Basic Information
- Insect
- Rhagium mordax
- Gene Symbol
- ARID5B
- Assembly
- GCA_963680705.1
- Location
- OY796659.1:7915706-7932845[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5 2.1e+04 -2.2 0.0 32 49 150 167 150 182 0.83 2 2 3.3e-25 2.8e-21 77.5 0.0 2 89 259 344 258 344 0.94
Sequence Information
- Coding Sequence
- ATGAATGAAATTCCCATCAAACATATAGCAATAAAATTAGATCCTGATACAATATTTATAGTTAATTATTCTTTAGTTGATCCACTACAGTCTATTCTGTTTTGTTTTCAGGATGAGGTTTTGGCCATTTCGGAAAAAGTCGTCATAAGAGTAGAAGATCTTATAACGTGGATAACAGTAGAAGCAGAGTGGACTTGGGGAAGGTTAGCACAATGTGAGGAAGATCTAAAAGACATTGAAGTAGATCCATCTAAATGTGCCCCACCACGAAAGCCTACCGGTACCAGCTTTACCCTGACCGACAGTACGTTGGATTTTTCTGATGttgaaaatgaaagaaaaacgTTAGAAGTCTACAAAGAAAATATGGGGCCTCATGTGATAATATTAAGTTTTCCAAAATACTGCCGTTATAGAGCCATGATGAAGAGATTGGAAGGAGtcgaaaatttgtatttaaagtaCAAAATTGTAAATGCTCTTGGTGGATTCTATGTAATACATCCCAACACAAGAGTACTTTTCTGCAAGGAAACATTCGATTACCCTGAATTGGAGGGGCATGAATTACTCTGTAATCATCTCGCACCAAAACTAAAAGGCAGACCAAGAGGAAAACGAAAAAAACGGAGCGTGTCTCCGGGCTCGGAAAGCAATGAATCAGAGTCTTCTATCACAAACAGTTACAACACAAGAGCAGAAAGTAGAAATGGTCTAGGATGCGATAATAGCATTATACCACGTCGTAGCACCCGCTGTcacgaaaataatgaaaacaaaGAATTCGTCCGAAAACTTACCACATTTATGAAATCTAATCACACACCAATAGGTCGAATTCCGTCCTTAGGCTATAAAGAATTGAATCTTCATGAATTCTTCACAAAAGTACAAAAGTTAGGAGGTTATGATGCTGTAACCACCAATCGTTTATGGAAATCAATATTTGACGATATGAGCGGACATCAAAATAGTACAAGCGCTGCCACAGTCATAAGACGTCATTATGAAAgGTTTTTGCTGTCGTATGAGCGTCACATCAAAGGAGAAGAGTACAAACCATTGCCTGTATCTGAAAGGCGAAGACTGAAAAGCAAACGAGGTAGTAGCAGTATAAGTGATGCAGAATCAAGCAGTGGAGATGCCACTCCAATACCTTCAACGTCCAGAAAAACGTCTACATCGGGAACTCCATCGGAAACTAAGGATGTTAGGACCGAGGGAAAACCCTCATCACTTAGAAGTGTTCGTGTTAAACCTGAAAGACAGAAAGATAAACAAGTTAACAGTGAAAAAGTCAGTGTtcaaaacaataacaataataatagtatCGATCAGCAGTCTAGTGTCAAAAAGGAGGAAGAAGATATTAAGCCAGAGGTGAAGCCTAAAATTgaaaaactaattattaaaactGAAAGTATGACCGTAAAAACTGAATATGCCAACATAAAGATTGAGAGCCCCTCGGAAAAAATTGAGTGTGCCCCTTTGAAAATTGAGCAAGAAGCCCTTAAATCTGAAAAAGTGTCTAACCATATGAAAGCCGAGATAACTCCCGTAAAAGCTGAAAGTAAGCCTGTAAAGTTAGATCCTTCAGTGATGAAAGCAGAAATTTTGCCTGTTAAATTTGAACCGATTAAGCaagaaaaaaacgaaattaaaatggAACCAGTCACTATTAAAGCAGAAAGCAAAATTATTCCAGAGAAAAATGCTGAGCCTTTAACCTCTGCGGCAACACCCGTTGCACAAAGAGTATCTCCTGATAAGTTGTTGTCGCCAGTGGAAGGCAAAGAAAATATACCAATTATTAAAACAGGAGATACCGCCTCAAAGAATAGCCCAGAAGTTATAGAGGTACCATACAAACCAAAGGTATCAGAAGTAGCAAATGTAGAATCCAATGCTTACAAAGGAGTTAGCAGCACATTCATACATGAAGTTAAAAAGAGGAAACTCGATATATTAAAAGAAGGGGGCCTCGAAGTAACCCCAGTGAGACCAACTATGACAAACCCACTGATAAAAGATGGTAGACCAACAGTTATACAAAACATAACGCCTCCAGCGCAAATAATATCCAAACCGTCTAAACAGGAAATTATGCCACCACCTTCCATAAACTCTGTTCCTCCTAAACGTGTGCACATAACAATTCCACAAGCCCTAAATATTAGTCACGTCAAAGTAGCTGCCACAACACCTATTAAACCTGTTAAGCCAGTACCAGTAACTactacaaattcattttcatttgcCAACGGCTCCACACCTCCAAAAGTAGTACAGTCAAAGTCCATCTATTCCTATTCTGAAAAAACAGTGTATGGCAATCCAAAAGACATTTTTACTCCTGCCATAAAAAATGTTGTTCATACCCCTAAGTTCATCAGCACTATTCCTAGGCATAATGGTGGTGACCCGGTAGATCTATCGGTAAATAGTCCACAGAAGCCAGTAGTGGAGATAATGCGTGTTCCACAAAATCTATCATCAAGCACGCAATCGCCATACAATCGAGATACCGTCAcgaaaaatctttataaaactACCTCGACTCCGATAATGGACGGAAGACGGCTGGGTCCAAACCTTGAAATTACCTTAGTGGGTCCAAATAAGAGTTCCAGtcataatttacaaaaaacctTCAACTACCCATCTGCACAACTACATAGTTCTCATTCAAGTAGTCAATATCATCAACAAAAGCGAACGTCAGCAGATTATTATAGTCCAAACAAAATGTCGAGGAATGATGAAAATGGAAAGttcaataaacatatttttctacCACCTCACAGAGATTCTAAATCTAATATGGATATAAATATTCCCAATCCTTACACAAACAAAAGTCCAAGTATAAAAGCTGACCCAATAAATAGTCACATGAAGCAATTGTCGCAAAACCAGTCACCTATGAAACATTTTCCAAGCCCTAATATGCCAGCCTTTTCCCCATACTTGTCGCAAATGTATGAAAGCAACAAGGGAATACCTCCTTATTTACCTCTAATCGACCCTGCCATGTATTATTCTGCTGCTATGCAGAGTTTATACACCAGCAACACATTGAACTCGGCCCCACCTATTCTGCCAATTCCAACGCCGGAACAGCTTAAATTTTATACCGATCTGATGGCACATGGAAGACTAAATTTCCCATTTCAGTTGCCTCAAGATGGCAGCCAGTCAGCTATTAACAACCTCAAGAAACCATAG
- Protein Sequence
- MNEIPIKHIAIKLDPDTIFIVNYSLVDPLQSILFCFQDEVLAISEKVVIRVEDLITWITVEAEWTWGRLAQCEEDLKDIEVDPSKCAPPRKPTGTSFTLTDSTLDFSDVENERKTLEVYKENMGPHVIILSFPKYCRYRAMMKRLEGVENLYLKYKIVNALGGFYVIHPNTRVLFCKETFDYPELEGHELLCNHLAPKLKGRPRGKRKKRSVSPGSESNESESSITNSYNTRAESRNGLGCDNSIIPRRSTRCHENNENKEFVRKLTTFMKSNHTPIGRIPSLGYKELNLHEFFTKVQKLGGYDAVTTNRLWKSIFDDMSGHQNSTSAATVIRRHYERFLLSYERHIKGEEYKPLPVSERRRLKSKRGSSSISDAESSSGDATPIPSTSRKTSTSGTPSETKDVRTEGKPSSLRSVRVKPERQKDKQVNSEKVSVQNNNNNNSIDQQSSVKKEEEDIKPEVKPKIEKLIIKTESMTVKTEYANIKIESPSEKIECAPLKIEQEALKSEKVSNHMKAEITPVKAESKPVKLDPSVMKAEILPVKFEPIKQEKNEIKMEPVTIKAESKIIPEKNAEPLTSAATPVAQRVSPDKLLSPVEGKENIPIIKTGDTASKNSPEVIEVPYKPKVSEVANVESNAYKGVSSTFIHEVKKRKLDILKEGGLEVTPVRPTMTNPLIKDGRPTVIQNITPPAQIISKPSKQEIMPPPSINSVPPKRVHITIPQALNISHVKVAATTPIKPVKPVPVTTTNSFSFANGSTPPKVVQSKSIYSYSEKTVYGNPKDIFTPAIKNVVHTPKFISTIPRHNGGDPVDLSVNSPQKPVVEIMRVPQNLSSSTQSPYNRDTVTKNLYKTTSTPIMDGRRLGPNLEITLVGPNKSSSHNLQKTFNYPSAQLHSSHSSSQYHQQKRTSADYYSPNKMSRNDENGKFNKHIFLPPHRDSKSNMDINIPNPYTNKSPSIKADPINSHMKQLSQNQSPMKHFPSPNMPAFSPYLSQMYESNKGIPPYLPLIDPAMYYSAAMQSLYTSNTLNSAPPILPIPTPEQLKFYTDLMAHGRLNFPFQLPQDGSQSAINNLKKP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01295770;
- 90% Identity
- -
- 80% Identity
- -