Rbic017934.1
Basic Information
- Insect
- Rhamnusium bicolor
- Gene Symbol
- dl
- Assembly
- GCA_029963845.1
- Location
- JANEYF010001477.1:138063-149453[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.2e-39 8.1e-35 122.4 0.0 65 169 1 107 1 107 0.99 2 2 2.1 3.3e+04 -3.3 0.1 105 129 289 313 285 322 0.71
Sequence Information
- Coding Sequence
- CCACATCCACATAACTTAGTAGGTAGAGAAGGCTGTAAGAGAGGAGTATGTACGTTAGAAATTCCAACCGATACAATGACTGTACATTTCTCGAATTTAGGCATACAGTGTGTCAAGAAAAAAGACATAGAGCACGCTCTGCGAGTTAGAGAAGAAATCCGGGTTGATCCCTTCCGAACTGGTTTCGGTCACCGTAATCAACCCACCTCAATAGACTTGAATGCCGTCAGGTTGTGTTTTCAAGTATTTTTAGAAGGTGATAAACCTGGAAAATTCTCCGTACCACTGACACCTGTTGTCAGCGATCCCATTTACGATAAAAAGGCTATGTCAGATCTCAGTATTATTAAGTTATCAGATTGTGTCAGTTATGTCGATGGTGGGCGAAAGGACATCATCTTACTTTGtgaaaaaGTTGCAAAAGAAGATATTCAAGTTAGATTCTACGAAGAAAAGGGCGACTGGGAGGCGTTTGCCGACTTTCAACCATCACAAGTCCACAAGCAACATGCAATTTGGTTCAGAACgccaaaatataaaacattagaCATAACCGAACCTGTGAAGGTCTTTATTCAGCTGCGCAGACCATCAGATGGTGCAACGAGTGAACCTCTACCTTTCGAATTGCTGCCTCTCGACTCAGGTAGGCCTCCGTATTGGTCATTTAGAAGAAATTTTGCCAAGAAAGCAAACTACAATTTGTTTAATAGTATACTGGCGAATGATGCTAAGTTAGTAACCAAGCGACAGTTAGGTAATTTGCCAGAGGGTAACGAGCAAGAACAGGCTGCGGAAAATCCTATTGTTACTTCTAGCTGGGGTGATTCGGTTCAAGAACGTGTTGTTGTAAGCAGTTCAACAGACATAAATACTCCATGGAGTGAGAGTATggaaactaataataatcaaagtaATATAGAAAACAAGGAAATGGACTATTCGGAAATTAAGAAATTGAGCAGAGACAATAATATTTTGACAAGTAATAACAGCAAAATAGAAGAGAAATCTTTCAATGAGCTTATAAACCAGGTTGCAGAGCTTGATGAAATATATTCAGATACCCAAGCCAGACTGTTAAGCGAGTCGTTAAAAGGCATTGACAAACCATCTTTACAAAACTTGCCAGATAATGAATCATTTGATGATGCAAAAACTTACTCCAGTCTTCAACTTGCATTAAAAAATCCCGttgaatttgattttaaaaaatatgatgacataataataaaaccacAGAGTCCCCTGATAAATTTGTCAGCAACTAATAAACGTGAAAACGAGTCTGAAAAACTGCCCCCACTGCCACCGAAACgttcgaaaaaaattgaaacttaTATAGGTGGTTCTCTGACTAGTATTCAGCTAATTGGAAAACCGTTGGAAAATACTTTGCATAGATCTAACTCCAGTCTGCGCACTGCACCTGTCAGTCGTTCACATTCGTTTAATTTACAAAGACCAAAATCTCAATCAGAACTGGTTCCCCCTGGCAAACGTTTACCTCCTACACCTAATTGTTCAACTCTACCTAATCCTAAAAAGCGTGGATTCTTTTCTAAATTGTTCGGCCGCAAGAGTAAAACTCCGGGCCACTCTCGTGAAACGAGTGTCACTCCCTCCACAAAAAGTAATATCTTTTCCAGTACAAAATCTCTGCAAGTCAACAACAATCTAGCAAAGAGTTCTAGTAACATATCTACACATTCTGCAAACAGTATACGTATACCTTTGAAAGATATCTTCAGTAATAAGAACGTAATAGATATGACGAGCGATGATATTGACATGCATCTAGATTTAACAGAAGCAGAACATTATGCTCTGTACACAGCGATGGCTCCCCACGCCACACAGAGCGAGTTCGATGATATGTCTTGCTATTATGCTCCTGTAGAAGGTGGAAAATTGTTGACAAATGCGGAAGTGTTAGAAAGACTCTCTTCTAAGACTTAA
- Protein Sequence
- PHPHNLVGREGCKRGVCTLEIPTDTMTVHFSNLGIQCVKKKDIEHALRVREEIRVDPFRTGFGHRNQPTSIDLNAVRLCFQVFLEGDKPGKFSVPLTPVVSDPIYDKKAMSDLSIIKLSDCVSYVDGGRKDIILLCEKVAKEDIQVRFYEEKGDWEAFADFQPSQVHKQHAIWFRTPKYKTLDITEPVKVFIQLRRPSDGATSEPLPFELLPLDSGRPPYWSFRRNFAKKANYNLFNSILANDAKLVTKRQLGNLPEGNEQEQAAENPIVTSSWGDSVQERVVVSSSTDINTPWSESMETNNNQSNIENKEMDYSEIKKLSRDNNILTSNNSKIEEKSFNELINQVAELDEIYSDTQARLLSESLKGIDKPSLQNLPDNESFDDAKTYSSLQLALKNPVEFDFKKYDDIIIKPQSPLINLSATNKRENESEKLPPLPPKRSKKIETYIGGSLTSIQLIGKPLENTLHRSNSSLRTAPVSRSHSFNLQRPKSQSELVPPGKRLPPTPNCSTLPNPKKRGFFSKLFGRKSKTPGHSRETSVTPSTKSNIFSSTKSLQVNNNLAKSSSNISTHSANSIRIPLKDIFSNKNVIDMTSDDIDMHLDLTEAEHYALYTAMAPHATQSEFDDMSCYYAPVEGGKLLTNAEVLERLSSKT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00885675; iTF_01368792; iTF_01289518;
- 90% Identity
- -
- 80% Identity
- -