Rmor035656.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Rhagium mordax
Gene Symbol
dl
Assembly
GCA_963680705.1
Location
OY796660.1:76042225-76062687[+]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.4e-75 7.1e-71 239.5 0.0 1 169 132 302 132 302 0.99
2 2 2.4 2.7e+04 -3.2 0.2 105 132 484 511 479 517 0.73

Sequence Information

Coding Sequence
atgtttaattattttaccgCTGAAAAAAACAATTATGGACCTCTTAAACCATTATTACAAGTAGATCAACGTGTATCTGAAGCTACTGGAATAAGTGTGTCGAAATTAAAAACTGTGCTGGAAAGAGCGAGACGTCTACCAGAAGAGCAAGTTGAGTTGAAACCAGAAAAATTAAACGTAggtgcaaaatttgaaatgtttaATACTGCAACGCGAGATGAACAAGGAATGCGAGATGATAACAACTTGTTAAGTGATGTCAttgaaGTTATTGCGACTGACCCGGACTTCAGGGAGTCCACGGCTCAACAGAATAGCAAAATGTTTAACGGAGGCGGTGAAATCCCCGCTCCCCAGCTCCAACCCCAACCCCCGAATCGAAGGCAGGCCCATGTGAAGATAATCGAACAGCCAGCCTCAAAAGCTCTTAGGTTTCGATATGAATGCGAAGGAAGATCCGCAGGGTCTATTCCGGGAGCCTCCAGTACTCCAGAGAATAAGACTTTTCCCACTATACAAATCGTCGGCTACCAAGGCAGAGCCGTCGTCGTTGTTTCATGTGTCACAAAAGATCCTCCTCACAGGCCACATCCACATAACTTAGTAGGTAGAGAAGGCTGTAAGAGAGGAGTATGTACGTTAGAAATTCCGACCGATACAATGACTGTACATTTCTCGAATTTAGGCATACAGTGTGTAAAGAAAAAAGACATTGAGCACGCTCTGCGAGTTCGAGAGGAAATCCGAGTTGATCCCTTCCGAACTGGTTTTGGTCATCGTAATCAACCCACCTCAATAGACTTGAATGCAGTGAGGTTGTGTTTTCAAGTGTTTTTAGAAGGTGACAAACCTGGAAAATTCTCCGTACCACTCACGCCTGTAGTGAGCGATCCCATTTACGATAAAAAAGCTATGTCAGATCTCAGTATTATTAAGCTATCAGATTGTGTCAGTTACGTAGACGGTGGAAGGAAAGACATCATTTTACTTTGTGAAAAGGTTGCAAAAGAGGATATTCAAGTGCGGTTTTATGAAGAAAAGGGTGGATGGGAAGCATTCGCTGACTTCCAACCATCTCAAGTTCATAAGCAACACGCCATTTGGTTTAGAACTCCGAAATATAAGACGTTAGAAGTAACGGAACCGGTGAAAGTATTCATTCAGCTTCGTAGACCTTCCGATGGTGCTACAAGTGAGCCTCTACCATTCGAATTGCTGCCTCTGGACTCAGGTAGGCCTCCTTATTGGTCATTTAGAagaaattttggcaaaaaagccaactataatttgtttaatagtaTTCTGGCAAATGATGCGAAGTTAGTTGCCAAACGACAGTTAGGTAATTTACCAGAAGCTAATGAGCAAGAACAGGTTGCGGAAAACCCTGTTGTTACTTCTATTTGGGGTGACACTGTACAAGAAAATGTAGTCGTGAGCAGTACAACAGATATAAATCCTCCATGGAAGGAAAAcatagaaacaaataataatcagAGTAAcattgaaaacaaagaaatggACTATgcggaaataaaaaaattaaacaaagatgATAATATTTTGACAGGTAATAGCAATAAAATGGAGGAAAAGTCCTTTAATGAGCTTATAAATCAAGTTGCTGAACTCGATGAAATCTACTCAGACACACAAGCTCGACTATTAAGCGAATCGTTAAAATATATTGACAAACCATCGTTACAAGACTTGCCAGAAAATGAGTCATTTGATGACGCAAAAACTTATTCTAGTCTCCAACTTGCGTTAAAAAACCCTGTTGAATTTGATTTCATGAAATATGACGAAGTGACAATAAAACCTCCTAGTCCTTCAGTAAACTTATCAGCAACTAATAAACGGGAAAACGAGTGTGAAAAATTACCTCCCTTGCCACCGAAACgttctaaaaaaattgaaacctATATAGGTGGTTCATTGACCAGTATTCAGCTAACTGGAAAATCGGTGGAAAATACCTTACACAGATCAAACTCTAGCCTGCGCACAGCACCTGTTAGCCGCTCACATTCGTTCAATTTACAGAGACCGAAATCTCAGTCAGAACTAGTCCCTCCTGGCAAGCGGTTACCTCCTACGCCTAACTGTTCTACACTGCCTAATCCCAAGAAGCGTGGATTCTTTTCTAAGTTGTTTGGTCGTAAGAGCAAAACTCCGGGTACGTCTCGTGAGACAAGTGTCACCCCCTCgacaaaaagtaatattttctcCAGTACAAAGTCCCTGCAAGTcaacaataatttggcaaagaGTGCCGGCAACATATCTACGCATTCTGCAAATAGCATACGCATCCCTTTGAAAGATAGCCCCCCAAGCAGTACCCAAAACTTAAGTGTCCTCCACACTGCTACTTTTAACCCagtttttagtaataaaaatgtaatagaTATGACTCGCGATGACATCGATATGCACCTAGATTTAACAGAAGCGGAGCATTATGCTCTGTATACAGCGATGGCTCCACACGCCACACAGAGCGAGTTCGATGAGATGTCTTGCTATTATGCTCCTGTAGAAGGCGGAAAATTGTTGACAAATGCAGAAGTGTTAGAAAGGCTCGCTTCTAAGACTTAA
Protein Sequence
MFNYFTAEKNNYGPLKPLLQVDQRVSEATGISVSKLKTVLERARRLPEEQVELKPEKLNVGAKFEMFNTATRDEQGMRDDNNLLSDVIEVIATDPDFRESTAQQNSKMFNGGGEIPAPQLQPQPPNRRQAHVKIIEQPASKALRFRYECEGRSAGSIPGASSTPENKTFPTIQIVGYQGRAVVVVSCVTKDPPHRPHPHNLVGREGCKRGVCTLEIPTDTMTVHFSNLGIQCVKKKDIEHALRVREEIRVDPFRTGFGHRNQPTSIDLNAVRLCFQVFLEGDKPGKFSVPLTPVVSDPIYDKKAMSDLSIIKLSDCVSYVDGGRKDIILLCEKVAKEDIQVRFYEEKGGWEAFADFQPSQVHKQHAIWFRTPKYKTLEVTEPVKVFIQLRRPSDGATSEPLPFELLPLDSGRPPYWSFRRNFGKKANYNLFNSILANDAKLVAKRQLGNLPEANEQEQVAENPVVTSIWGDTVQENVVVSSTTDINPPWKENIETNNNQSNIENKEMDYAEIKKLNKDDNILTGNSNKMEEKSFNELINQVAELDEIYSDTQARLLSESLKYIDKPSLQDLPENESFDDAKTYSSLQLALKNPVEFDFMKYDEVTIKPPSPSVNLSATNKRENECEKLPPLPPKRSKKIETYIGGSLTSIQLTGKSVENTLHRSNSSLRTAPVSRSHSFNLQRPKSQSELVPPGKRLPPTPNCSTLPNPKKRGFFSKLFGRKSKTPGTSRETSVTPSTKSNIFSSTKSLQVNNNLAKSAGNISTHSANSIRIPLKDSPPSSTQNLSVLHTATFNPVFSNKNVIDMTRDDIDMHLDLTEAEHYALYTAMAPHATQSEFDEMSCYYAPVEGGKLLTNAEVLERLASKT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01295760;
90% Identity
iTF_00885675;
80% Identity
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