Rgig015922.1
Basic Information
- Insect
- Rhagophthalmus giganteus
- Gene Symbol
- Sub1
- Assembly
- GCA_036326145.1
- Location
- JARFJA010000050.1:640410-640771[+]
Transcription Factor Domain
- TF Family
- PC4
- Domain
- PC4 domain
- PFAM
- PF02229
- TF Group
- Unclassified Structure
- Description
- This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.41 1.3e+04 -3.4 0.9 32 37 4 9 3 9 0.81 2 2 1.2e-28 3.9e-24 84.7 1.5 1 50 38 87 38 89 0.98
Sequence Information
- Coding Sequence
- ATGCCAAAAAATAAACCTAGCAAGAAGAAGAGCGAGTCTTCAGATTCCGATTCGGGGCCCGATGATAGGGGACCCGTGAAAAAGCAGAAGGTAGATAACGAGGACAATTCGTGGGATTTGGGGAAAAATCGATTCGTGAAACTCAGCGAATTTAAGGGCAAATGGTACGTTAACATTCGTGAATTCTATAATGCCGATGGCGAACTAAAGCCCGGCAAGAAAGGTATTATGTTGACCATGGAGCAGTGGCAGAAGTTTAAGGGGTTCATCAGTGAAATCGACGACGCAGTGAAgcggaatgtttag
- Protein Sequence
- MPKNKPSKKKSESSDSDSGPDDRGPVKKQKVDNEDNSWDLGKNRFVKLSEFKGKWYVNIREFYNADGELKPGKKGIMLTMEQWQKFKGFISEIDDAVKRNV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00399164;
- 90% Identity
- -
- 80% Identity
- -