Rlut024170.1
Basic Information
- Insect
- Rhagonycha lutea
- Gene Symbol
- lilli
- Assembly
- GCA_958510855.1
- Location
- OY294040.1:7985413-8026378[+]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 7 4.3e-10 1.6e-05 25.4 14.2 4 195 61 264 60 287 0.54 2 7 0.00011 4 7.6 0.2 341 382 285 326 266 347 0.81 3 7 6.7e-07 0.024 14.9 23.2 410 513 382 506 366 507 0.51 4 7 1 3.6e+04 -8.2 14.0 126 268 493 637 478 648 0.52 5 7 1 3.6e+04 -11.1 23.5 86 227 716 858 698 902 0.38 6 7 8.8e-05 3.2 7.9 23.6 107 240 1064 1193 1015 1236 0.52 7 7 0.24 8.8e+03 -3.5 0.4 210 225 1410 1425 1380 1469 0.48
Sequence Information
- Coding Sequence
- ATGGTAGGAGGAAGCCTTCGCAGACTCGAAGGAAATGAAGGTGGAAAACTGGAAAGATTTCTCAAGAAAAAATGGAGAGGGGTGCTAGAAGAGAAGATTGTAGAAACAAAGGACATGCAGAGCAAGAAAAGAGGATTGATACTCCTCAGACAATGGATTCAGATGCATGGAGCTATTATCGAAAGAGACCGCCTTCGGGAGCGGGAGAGACAGGCACGTGCTCAAATGTCCTCCCAAGTAGCCGAACGAGATAGGGAACAGGAGGTCCCTGGAGCTGGAGCACCTCTTTTTACATCACCGGTCAAGATAAATCCATCTTCAACGGATCGTGTAACGCAACAAATTCAGAGCAAACTGGGTGATTATCAAAGAGTGAAGCCGTTTTTGGACGATTCGAAAAGGTTAATAGGTGTAGACGGTGTACCTCCAAGTCCTGGTGGTCCATTGTCAACTGCCAATACCACTACAACGAATCGCTTACCAACTGCAGTTGTGTTACCTTCCAGACTTCACCCACCTGTTGATAATACGAGATCCGAGTTTAAAAAACCCCCACAGAGTAATAGTCGTTCGGCGACCCATCACTCTTCCTATCCTCGGCGGGAATTTTCAAAACCTACCGATGGGAAACTTCCGTACGATAACAGTAGAGGATATTCAACACAGCCCGTCAAGTCGGTGAATCCCATCAGCAGTCATCGTTCCAACGGTATTTCGACATCGAAACAGCCAACTTCTCAATCGTCTTCATCTACCAATAGCTCAAATTCTTCAAGGATATCCAGTGCTGCCCGGCATTTACCTAGAATCTCTATTGATCAGgGTGGCGTTTCTCTGCCTCGAGATTCCTCGTCAACAAGTGGAACTCCAGCGGAAGTTGAAAGCATATTGAAGGAAATGATTCAGGTAAGGACGCCACTTACCGCCATTGCCGCTACTCCGCGAAAGGAACCGGATGATAAATTTACTTTCAATTCATCAGCACCACCAAAgTTGTTCGAGGCGCCTAAACCATCATCGCCGTTGGATTCATCGACGTTAAAAATTGTTTATTTGATTAGTCGTGTTTTGTTTGTTGTTGCAATATACGTTTATCCGAAACACATGGCTGCAGTGGTAATCGTGCGCACGCAACCTTCCGGCGACAGAGCGCGgGAATTACGCGACGATTTCAAAATATCGGAATCAGACGAAAGCGATGTCGAACAACACAAAAAATCTCCATTGTTATCTGCCAAGTTACCAATAGATAGGTTGATCTCACCAATCAGAAGAACCCCTTCTAATAATTCTGTAATGGAGCAATGTGCGGAACCGACATCACCGGGAATGGCAAGCTCTTCTAGCGATTCGGGTTCAGATTCTGGTTCAGACAGTGATTCGAGCAGCGACGATTCTGGAGAAGACCACACCGCGACGATAAATCCTCAAGCGTCATCGGAAACTCCCAATCCTTCTCAAGTGTCTCCAAAACCTGAGGAAGAAAATAAACCTCGTTGGAATTTAGCTTCATATTTGGATCAAAACGGATCAAAATTGGATTCGACGCAATCACTTCGACATCAGTCACCTCGAATCTTACCGTCCGATCTCCTTCCTTCAAAAAGTGCTAAAGATTATAGGCAAAAGTGTAGTGACGAATCAGATTGTAGTACTTTTTCACCTCAAGAGTTAGACAAACTTGTGGCCGAAGCTCTTGCTTCAACAAAACCTCCCCTTCTTCTTTCCGGCCTTTCGGATTCCGATAGTAATCCTAAACGAACAAAACGTAAACTACAAAAGAGACCTGTTAATAAAGTTACCAATTCGAAATTGTCTGATAGTGATAGTGATGATAACGTAGTACGAACTAAAGTTACTAAACCAACCAATCGCGTTAGTCCCAGGCCTAAATCGGTCGATTCGTTTAGCGATTCAGATATGTACGTAAGGCGTAGGAACGAATTGCTTCCTCTTTCGCAAAATCTGAAGAAATCCGCGACAGATAAACCTAAATCTAATCGCGGACGTCCGAGGAAAGTGAAACCGGCGGCGTCGCATAGTGGTTCGGACGTTGAAGTTAAAACGAAGAAGAGGGGGCGTCCACCGGGCAGCGGTACCAACAAAAATCGTTCTTTGAGTGGGTCTGATAACGATGTTCCTGTAAAACGAAGAGGACGACCGCctttaaaacaaaaacgtcCACCGTCTTCTAGTAGTTCCGAAGACGAAGGAAAGCATATTTTTGATAAGCCTGCTCCTCCGTCGAGGCGAAGAACTGTGTCAAAGAGAGACGATTCGCGCAGCGATTCCGATAATAGCAACAGATCGCACAAAATGAGCACTTCGGATAGGGACGAGTCCTTGAAGCATCAGAAACCTAGAATATTAAAAGTAGACGATAAGGAAAGACTTAAGAAGGGGAAGAACGATTCAGAAAACGACGAATGgggtaaaataaacaaaagcaaaataaaaaccCATTTGTTTGACAAGAGTCAAGAAGATTTGAGCGGCAAAAGTGGTGGTAAACAGAAGCGAAGCACAGAATCTCCAAAGAAAAAAGAAACAGCTGCGCCTTTTAGAAGAAAAGGTCgatcaaattcaaatgtaaaaagTGCCCCTTACCTTTCAACTACTACTGACGATTCCGATTCAGATAATCAGGCTGTGAAGAAACCACGTATAGATGGTAAAATACTTAATCGAAGTCGGTCGCCTAGTTCAGATAGCGAGGTCAATATTAATCAATTTTCTGACGTTGATCGGTCAAATTCGGCGTTAAAATCCAAATTGGAGAGTCCCGTGAAAGTGGAATCGAGTGGCAAAATTGTACAAGACAAGAAGAAAAGTGATACTCTCAGGAAGTTGTTTACCCCTAAGAGGGATTCCGAAGGCGGTAAAGGAGGGGGAAAAGGTGGCGGTAAGGGTGGAAAAGGGGGAAAGGGTAAAGCTGGAGTGAATGTAATAATTGTGGACGGCGACTACGAAAGAAGTAGCTCATCTGTGGATGATGAAGTGTTACCAACTGTTCACAATCCTTCCGCATTATCTCCTTGTGTTACGAAAGAGGTTATGCCTTACTCGCAAATTCCTATTAAGAGTGAACCATTATCAGAACCAATCAAGAGTGAGAAAGCGACGTGTAAGGTCAGCATAAATCTAAACATGATCGATGTAAGTAAATTTAAGCACataccaatttttaataaaatctatCGGCAACAACGGGAACAATCGAAAGCTTCTTCTAAGCACAGCGaggaagtaaaaaaaaagtgcgAAAGTACAAGTGATAGTAAACATTCTTCCTATCGAGAAGAACATGTTAAAAGTAGTAAAAGTGATCGGACAACCTTAAATAATGATAGTGATAATGAAGTAAAAAGACAAAGTTGGAAGGGTGAGAAAGATTCGGATGGGAAAGATAATTCAAAATATGCTGGCCACAAGAGAAAACGACGTACAAGTTGTAGTTCTGTTTCTTCTTTATCCACAGTGAGTAGTTTATCTCATAGTAGTAGTCGACGGAAGGAACATAGAAAAGAAAAAGACGATCATAAAAGTAAAcgacggagagaaaaattagaGGCTCTCCAAAACAGATCTCGCCCAAATAGTGAAAATTTAGTTGATGCACCGCCGACAAACCACGATAGGGAAGTTGCCAGAATACCCCCTTTACCTTCCCCTGCTGATCGCAATTCCAACCACAGCTGGTCTCAACCTACAAGAGAATATCATCCTTATTTTGAGAGAACCGATGAAGGTCTGGAGGAGCAAGATAGAAATCAACACAAATATCTCTGCGAAGCAAAGAGATTAAAACATTTAGCTGATACAGAGACTGATACTATAAAGCAATGCATGATGTACATGGACGCcgtgctttattttttattaaccgGCAATGCGATGGAACAAGAAACCGAGAAAGCAGCTTTTACCATGTACAAGGACACCCTCGCCCTTATCAAATATATTTCATCAAAGTTTCGACCGGACCAAATCAATTGTTCGTCAAACTATGGTAAATTAGCGGTGTTAAGttaccGATGCCAAGCcttgttatattataaattatttaaaatgaaaaggGTGGAATTGAAAGATGTCCATAAAATGTGTACCGAGTTTTGTGTAAAAtcGGCCAATATAACACCAATTCAAACGGATCAACTAAATCAAGCCGTTGTTGGTACACCATGTCCTCTATCACCCACACCATCTCCTGCAGGATCCGTGGGTTCTGTGGGTAGTCAGTCATCATCTGGTTACAGTAGTGGAGAGTTAGCTAATAGAGGCAATAATAGTATTAGTAATTCGGCTACGCAGCAGTCAGCATTGACACCATCTCACCAAAATCCTTGTGTATTAATACCACTTCCTGTGTTTCATGCTATTACGAAAATGAATCAAAATTGTACATATGTATTTTCTTATCAAGATTTATGGGATCAAGCAGATTCTCTGGAAATCAAAGGCAAACACAAAGATTTTTTTATCGAATTGGACAAATCATGTAAACCATTAACGTTACATAGTTCATTAATTGAAGTGGTAAAGTACGTACGGAATGGAATAAATCGTCTAAAAGAGAAgatgtattaa
- Protein Sequence
- MVGGSLRRLEGNEGGKLERFLKKKWRGVLEEKIVETKDMQSKKRGLILLRQWIQMHGAIIERDRLRERERQARAQMSSQVAERDREQEVPGAGAPLFTSPVKINPSSTDRVTQQIQSKLGDYQRVKPFLDDSKRLIGVDGVPPSPGGPLSTANTTTTNRLPTAVVLPSRLHPPVDNTRSEFKKPPQSNSRSATHHSSYPRREFSKPTDGKLPYDNSRGYSTQPVKSVNPISSHRSNGISTSKQPTSQSSSSTNSSNSSRISSAARHLPRISIDQGGVSLPRDSSSTSGTPAEVESILKEMIQVRTPLTAIAATPRKEPDDKFTFNSSAPPKLFEAPKPSSPLDSSTLKIVYLISRVLFVVAIYVYPKHMAAVVIVRTQPSGDRARELRDDFKISESDESDVEQHKKSPLLSAKLPIDRLISPIRRTPSNNSVMEQCAEPTSPGMASSSSDSGSDSGSDSDSSSDDSGEDHTATINPQASSETPNPSQVSPKPEEENKPRWNLASYLDQNGSKLDSTQSLRHQSPRILPSDLLPSKSAKDYRQKCSDESDCSTFSPQELDKLVAEALASTKPPLLLSGLSDSDSNPKRTKRKLQKRPVNKVTNSKLSDSDSDDNVVRTKVTKPTNRVSPRPKSVDSFSDSDMYVRRRNELLPLSQNLKKSATDKPKSNRGRPRKVKPAASHSGSDVEVKTKKRGRPPGSGTNKNRSLSGSDNDVPVKRRGRPPLKQKRPPSSSSSEDEGKHIFDKPAPPSRRRTVSKRDDSRSDSDNSNRSHKMSTSDRDESLKHQKPRILKVDDKERLKKGKNDSENDEWGKINKSKIKTHLFDKSQEDLSGKSGGKQKRSTESPKKKETAAPFRRKGRSNSNVKSAPYLSTTTDDSDSDNQAVKKPRIDGKILNRSRSPSSDSEVNINQFSDVDRSNSALKSKLESPVKVESSGKIVQDKKKSDTLRKLFTPKRDSEGGKGGGKGGGKGGKGGKGKAGVNVIIVDGDYERSSSSVDDEVLPTVHNPSALSPCVTKEVMPYSQIPIKSEPLSEPIKSEKATCKVSINLNMIDVSKFKHIPIFNKIYRQQREQSKASSKHSEEVKKKCESTSDSKHSSYREEHVKSSKSDRTTLNNDSDNEVKRQSWKGEKDSDGKDNSKYAGHKRKRRTSCSSVSSLSTVSSLSHSSSRRKEHRKEKDDHKSKRRREKLEALQNRSRPNSENLVDAPPTNHDREVARIPPLPSPADRNSNHSWSQPTREYHPYFERTDEGLEEQDRNQHKYLCEAKRLKHLADTETDTIKQCMMYMDAVLYFLLTGNAMEQETEKAAFTMYKDTLALIKYISSKFRPDQINCSSNYGKLAVLSYRCQALLYYKLFKMKRVELKDVHKMCTEFCVKSANITPIQTDQLNQAVVGTPCPLSPTPSPAGSVGSVGSQSSSGYSSGELANRGNNSISNSATQQSALTPSHQNPCVLIPLPVFHAITKMNQNCTYVFSYQDLWDQADSLEIKGKHKDFFIELDKSCKPLTLHSSLIEVVKYVRNGINRLKEKMY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01291558;
- 90% Identity
- iTF_01291558;
- 80% Identity
- -