Basic Information

Insect: Rhagonycha fulva
Gene Symbol: lilli
Assembly: GCA_905340355.1
Location: HG996558.1:27266324-27311808[-]

Transcription Factor Domain

TF Family: AF-4
Domain: AF-4 domain
PFAM: PF05110
TF Group: Unclassified Structure
Description: This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 1.2e-09 3.8e-05 24.0 16.0 4 205 7 210 5 235 0.54

2 8 1.3e-11 4.3e-07 30.4 29.1 341 501 231 410 206 432 0.59

3 8 0.97 3.2e+04 -5.4 11.4 125 268 417 562 403 571 0.52

4 8 1 3.3e+04 -10.5 15.5 81 215 458 597 439 659 0.43

5 8 1 3.3e+04 -10.6 24.8 84 235 639 785 623 812 0.40

6 8 1 3.3e+04 -6.1 13.6 66 188 741 866 731 882 0.48

7 8 0.0002 6.7 6.7 23.9 115 246 997 1118 952 1160 0.55

8 8 0.21 7e+03 -3.3 0.3 210 226 1335 1351 1305 1395 0.48

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	1.2e-09	3.8e-05	24.0	16.0	4	205	7	210	5	235	0.54
2	8	1.3e-11	4.3e-07	30.4	29.1	341	501	231	410	206	432	0.59
3	8	0.97	3.2e+04	-5.4	11.4	125	268	417	562	403	571	0.52
4	8	1	3.3e+04	-10.5	15.5	81	215	458	597	439	659	0.43
5	8	1	3.3e+04	-10.6	24.8	84	235	639	785	623	812	0.40
6	8	1	3.3e+04	-6.1	13.6	66	188	741	866	731	882	0.48
7	8	0.0002	6.7	6.7	23.9	115	246	997	1118	952	1160	0.55
8	8	0.21	7e+03	-3.3	0.3	210	226	1335	1351	1305	1395	0.48

Sequence Information

Coding Sequence: ATGAAGAAACCTCGTATCGAAAGAGACCGCCTTCGGGAGCGGGAGAGACAGGCACGTGCTCAAATGTCCTCCCAAGTAGCTGAACGAGATAGGGAACAGGAGGTCCCTGGAGCTGGAGCACCTCTTTTTACATCACCGGTCAAGATAAATCCATCTTCAACGGATCGTGTAACGCAACAAATTCAGAGCAAACTGGGTGATTATCAGAGGGTGAAGCCGTTTTTGGATGATTCGAAAAGGTTAATAGGTGTAGACGGTGTACCTCCAAGTCCTGGTGGTCCATTGTCAACTGCCAATACCACTACAACGAATCGCTTACCAACTGCAGTTGTGTTACCTTCCAGACTTCATCCACCTGTTGATAATACGAGATCCGAGTTTAAAAAACCCCCACAGAGTAATAGTCGTTCGGCGACCCATCACTCTTCCTATCCACGCCGGGAATTTTCAAAACCCACCGATGGGAAACTTCCGTACGATAACAGTAGAGGATATTCAACACAGCCCGTCAAGTCGGTGAATCCCATCAGCAGTCATCGTTCCAACGGTATTTCGACATCGAAACAGCCAACTTCTCAATCGTCTTCATCTACCAATAGCTCAAATTCTTCAAGGATATCCAGTGCTGCCCGGCATTTACCTAGAATCTCTATTGATCAGGGTGGCGGTTCTCTGCCTCGAGATTCCTCGTCAACAAGTGGAACTCCAGCGGAAGTTGAAAGCATATTGAAGGAAATGATTCAGGTAAGGACGCCACTTACCGCCATTGCCGCTACTCCGCGAAAGGAACCGGATGATAAATTTACTTTCAATTCATCAGCACCACCAAAGTTGTTCGAGGCGCCTAAACCATCATCGCCGTTGGATTCCTCGACGTTAAAAAAACATGAGCAACGTCAAGCACAACCTCTTCAGCGCTCAGCGTCGACGGAATTACGCGACGATTTCAAAATATCGGAATCAGACGAAAGCGATGTCGAACAACACAAAAAATCTCCATTGTTATCTGCCAAGTTACCAATAGATAGGTTGATCTCGCCAATCAGAAGAACCCCTTCTAATAATTCTGTAATGGAGCAATGTGCGGAACCGACATCACCGGGAATGGCAAGCTCTTCGAGCGATTCGGGTTCAGATTCTGGTTCAGACAGTGATTCGAGCAGCGACGATTCTGGAGAAGACCACACCGCGACGATAAATCCTCAACCGTCGTCGGAAACTCCCAATCCTTCTCAAGCGTCTCCAAAACTTGAGGAAGAAAACAAACCTCGTTGGAATTTAGCTTCATATTTGGATCAAAACGGATCAAAACTGGATTCGACGCAATCACTTCGACATCAGTCACCTCGAATCTTACCGTCCGATCTCCTTCCTTCAAAAAGTGCTAAAGATTATAGGCAAAAGTGTAGTGACGAATCAGATTGTAGTACTTTTTCACCTCAAGAGTTAGACAAACTTGTGGCCGAAGCTCTTGCTTCAACAAAACCTCCCCTTCTTCTTTCCGGCCTTTCGGATTCCGATAGTAATCCTAAACGAACAAAACGTAAACTACAAAAGAGACCTGTTAATAAAGTTACCAATTCGAAATTGTCTGATAGTGATAGTGATGATAACGTAGTACGAACTAAAGTTACTAAACCAACCAATCGCGTTAGTCCCAGGCCTAAATCGGTCGATTCGTTTAGCGATTCAGATATGTACGTAAGGCGTAGGAACGAATCGCTTCCTCTTTCGCAAAATCTGAAGAAATCCGCGACAGATAAACCTAAATCTAATCGCGGACGTCCGAGGAAAGTGAAACCGGCGGCGTCACATAGCGGTTCGGACGTGGAAGTTAAAACCAAGAAGAGGGGGCGTCCACCGGGCAGCGGTACCAACAAAAATCGTTCTTTAAGTGGGTCTGATAACGAAGTTCCTGTAAAACGAAGAGGACGACCGCCTTTAAAACAAAAACGTCCACCGTCTTCTAGCAGTTCCGAAGACGAAGGAAAACATATTTTTGATAAGCCTGCTCCTCCGTCGAGACGAAGGACCGTCTCAAAGCGGGACGATTCGCGCAGCGATTCCGATAATAGCAACAGATCGCACAAAATGAGTACTTCGGATAGGGACGAGTCGTTGAAGCATCAGAAACCTAGAATATCAAAAGTAGACGATAAGGAAAGACTTAAGAAGGGGAAGAACGATTCAGAAAACGACGAATGGGGTAAAATAAACAAAAGCAAAATAAAAACCCATTTGTTTGACAAGAGTCAAGAAGATTTGAGCGTCAAAAGTGGTGGTAAACAGAAGCGAAGCACAGAATCTCCAAAGAAAAAAGAAACTGCTGCGCCTTTTAGAAGAAAAGGTCGATCGAATTCAAATGTTAAAAGTGCCCCTTACCTTTCGACTACTACTGACGATTCCGATTCAGATAATCAGGCTGTGAAGAAACCACGTATAGATGGTAAAATACTTAATCGAAGTCGGTCGCCCAGTTCAGATAGCGAGGTCAATATTAATCAATTTTCTGACGTTGATCGGTCAAATTCGGCGTTGAAATCCAAATTGGAGAGTCCCGTAAAAGTGGAATCGAGTGGCAAGGCTGTACAAGACAAAAAGAAAAGTGACACTCTCAGGAAGTTGTTTACGCCTAAGAGAGATTCCGAAGGCGGTAAAGGAGGGGGAAAAGGTGGTGGTAAGGGTGGAAAAGGGGGAAAGGGTAAAGCCGGAGTGAATGTAATAATTGTGGACGGCGACTACGAAAGAAGCAGCTCATCTGTGGATGATGAAGTGTTACCAACTGTTCACAATTCTTCCGCATTATCTCCTTGCGTTACGAAAGAGGTTATGCCTTACTCGCAAATTCCTATTAAGAGTGAGGTATTATCGGAACCAATCAAGAGTGAGAAAGCGACGTGTAAAGTCAGCATAAGTCTAAACATGATCGATTTAAGTAAATTTAAGCACATACCAATTTTAAATAAAATCTATCGGCAACAACGGGAACAATTGAAAGCTTCTTCTAGGCAAAGCGAAGAAGTAAAAAAAAAGTGCGAAAGTACAAGTGATAGTAAACATTCTTCCTATCGAGAAGAACACGTTAAAAGTAGTAAAAGTGATCGGACAACCTTAAATAATGATAGTGATAATGAAGTAAAAAGACAGAGTTGGAAGGGCGAGAAAGATTCGGATAGTAAAGATAATTCAAAATATGCTGGTCACAAGAGAAAACGACGTACAAGTTGTAGTTCTGTTTCTTCTTTATCCACAGTGAGTAGTTTATCTCATAGTAGTAGTCGAAGGAAGGAACATAGAAAAGAAAAAGACGATCATAAAAGTAAACGACGAAGAGAAAAACTAGAGGCTCTCCAAAACAGATCTCGCCCAAGTAGTGAAAATTTAGTTGATGCACCGCCGACAAACCATGATAGGGAAGTTGCCAGAATACCCCCTTTACCTTCCCCTGCTGATCGCAATTCCAACCACAGCTGGTCTCAACCTACAAGAGAATATCATCCTTATTTTGAGAGAACCGATGAGGGCTTGGAGGAGCAAGATAGGAATCAACACAAATATCTCTGCGAAGCAAAGAGATTAAAACATTTAGCTGATACAGAGACTGATACTATAAAGCAATGCATGATGTACATGGACGCAGTGCTTTATTTTTTATTAACCGGCAATGCGATGGAACAAGAAACCGAGAAAGCAGCTTTTACCATGTACAAGGACACCCTTGCTCTTATCAAATATATTTCATCAAAGTTTCGACCGGACCAAATCAATTGTTCGTCAAACTATGGTAAATTAGCGGTGTTGAGTTACCGATGCCAAGCCTTGTTATATTACAAGTTGTTTAAAATGAAAAGGGTAGAACTGAAAGACGTTCATAAAATGTGTACTGAGTTTTGTGTAAAATCGGCCAATATAACACCAATTCAAACGGATCAACTAAATCAAGCCGTTGTTGGTACACCGTGTCCTCTATCACCCACACCATCTCCTGCAGGGTCCGTGGGTTCTGTGGGTAGTCAGTCATCATCTGGTTACAGTAGTGGAGAGTTAGCTAATAGAGGCAATAATAGTATTAGTAATTCGGCTACGCAGCAGTCAGCATTGACACCATCTCACCAAAATCCTTGTGTATTAATACCACTTCCTGTGTTTCATGCTATTACGAAAATGAATCAAAATTGTACATATGTATTTTCTTATCAAGATTTATGGGATCAAGCGGATTCTCTGGAAATCAAAGGCAAACACAAAGATTTTTTTATCGAATTGGACAAATCATGTAAGCCGTTAACGTTACATAGTTCATTAATCGAAGTGGTAAAGTACGTACGGAATGGAATAAATCGTCTAAAAGAGAAGATGTATTAA
Protein Sequence: MKKPRIERDRLRERERQARAQMSSQVAERDREQEVPGAGAPLFTSPVKINPSSTDRVTQQIQSKLGDYQRVKPFLDDSKRLIGVDGVPPSPGGPLSTANTTTTNRLPTAVVLPSRLHPPVDNTRSEFKKPPQSNSRSATHHSSYPRREFSKPTDGKLPYDNSRGYSTQPVKSVNPISSHRSNGISTSKQPTSQSSSSTNSSNSSRISSAARHLPRISIDQGGGSLPRDSSSTSGTPAEVESILKEMIQVRTPLTAIAATPRKEPDDKFTFNSSAPPKLFEAPKPSSPLDSSTLKKHEQRQAQPLQRSASTELRDDFKISESDESDVEQHKKSPLLSAKLPIDRLISPIRRTPSNNSVMEQCAEPTSPGMASSSSDSGSDSGSDSDSSSDDSGEDHTATINPQPSSETPNPSQASPKLEEENKPRWNLASYLDQNGSKLDSTQSLRHQSPRILPSDLLPSKSAKDYRQKCSDESDCSTFSPQELDKLVAEALASTKPPLLLSGLSDSDSNPKRTKRKLQKRPVNKVTNSKLSDSDSDDNVVRTKVTKPTNRVSPRPKSVDSFSDSDMYVRRRNESLPLSQNLKKSATDKPKSNRGRPRKVKPAASHSGSDVEVKTKKRGRPPGSGTNKNRSLSGSDNEVPVKRRGRPPLKQKRPPSSSSSEDEGKHIFDKPAPPSRRRTVSKRDDSRSDSDNSNRSHKMSTSDRDESLKHQKPRISKVDDKERLKKGKNDSENDEWGKINKSKIKTHLFDKSQEDLSVKSGGKQKRSTESPKKKETAAPFRRKGRSNSNVKSAPYLSTTTDDSDSDNQAVKKPRIDGKILNRSRSPSSDSEVNINQFSDVDRSNSALKSKLESPVKVESSGKAVQDKKKSDTLRKLFTPKRDSEGGKGGGKGGGKGGKGGKGKAGVNVIIVDGDYERSSSSVDDEVLPTVHNSSALSPCVTKEVMPYSQIPIKSEVLSEPIKSEKATCKVSISLNMIDLSKFKHIPILNKIYRQQREQLKASSRQSEEVKKKCESTSDSKHSSYREEHVKSSKSDRTTLNNDSDNEVKRQSWKGEKDSDSKDNSKYAGHKRKRRTSCSSVSSLSTVSSLSHSSSRRKEHRKEKDDHKSKRRREKLEALQNRSRPSSENLVDAPPTNHDREVARIPPLPSPADRNSNHSWSQPTREYHPYFERTDEGLEEQDRNQHKYLCEAKRLKHLADTETDTIKQCMMYMDAVLYFLLTGNAMEQETEKAAFTMYKDTLALIKYISSKFRPDQINCSSNYGKLAVLSYRCQALLYYKLFKMKRVELKDVHKMCTEFCVKSANITPIQTDQLNQAVVGTPCPLSPTPSPAGSVGSVGSQSSSGYSSGELANRGNNSISNSATQQSALTPSHQNPCVLIPLPVFHAITKMNQNCTYVFSYQDLWDQADSLEIKGKHKDFFIELDKSCKPLTLHSSLIEVVKYVRNGINRLKEKMY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01293680;
90% Identity: iTF_01293680;
80% Identity: -