Rlut012348.1
Basic Information
- Insect
- Rhagonycha lutea
- Gene Symbol
- Rel
- Assembly
- GCA_958510855.1
- Location
- OY294037.1:79132480-79139943[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.6e-36 1.6e-32 113.8 1.7 1 168 75 268 75 269 0.86 2 2 4.7 2.1e+04 -3.8 0.2 101 122 741 762 739 769 0.77
Sequence Information
- Coding Sequence
- ATGTTGAGTTTTCAACCCCAGTCGACTAATTTTACACCAAATTATTATGATAATGCTCAAGGAACCCATCTGGACATGAGTAATTACATTAACGTCTTGACGCCTCCAACGGAGTCCTCAGATTCTATGATGTATTCACCAAAAGGCGATTGTTTGTCACCGCCACAATACATCCAATACATCCAACCTCCTTTGGAGAGATTACAAGGCCATAAACCTTATTTAACGGTGTTGGAGGAACCGGTGGAAAGATTCAGATTTCGTTACAAGTCGGAAATGTCGGGTACTCATGGGTCATTGAATGGCAAATCTTCTGATAGGGCTCGTAAACAAACATATCCAACAGTCAAGGTACATAATGTCAATGTACCCTTAACAGTACGCTGTTCTCTTTACCAATGGGGACGCGAAGATATGGCTCACAGGCGACAGCCTCACGCCCACAGACTTGTCAGAAAACACGAAGGTGAGGAAAAGGATGATCCCCACAGTGTACAAGTGAATGCTGAAAACGATTACATAGCCAATTTTCACAGTATGGGAATCATCCACACTGCTAAAAAGTATATAGTTCCGGAGTTAATAAAGAAATACATAAATTTGAAACAAGAAGAAATTGCTCGAACAGAGGGAAAATATCGCCAACTTACCAAAAAAGAAGATATCGACATTCGTGAAATGGCGGAGAAAGAAAGCAAATGTATAAATTTGAACATTGTGTGCCTGCGTTTTGAAGCTTTTGAAATTCGCAATAATATTTATTGTCCTGTTGGACAACCGGTGTATTCAAatgcaattaataatttaaaaagtgcaTTAACGGgcgatttaaaaattgtacgtATGGACCACTGTACCAGCCCATGTAATGGTGGTcgagaaatatttattttagtagAAAAAGTTACAAAGAAAAATATTAAAGTGCGATTTTATGAGTTGGATGACGATGACAACGAAATATGGAGTGATTATGGTCGATTTACCGATTTGGATGTTCACCATCAGTACGCTATCGTTTTTaaAACGCCCCCTTATCGAAACCAAACAATTAACAGTCAGGTGAGAGTTTACATAGAATTAGAAAGACCTTCCGATAGTGCGAAAAGTGATCCAAAAGACTTTACGTACACACCATCCGAGATCATGTGTGGTAGAAAACGTGTCAGATATAGCCATTCGAGCAGTTATAATAGTAAGAGCTTTTCAAGCAGCGAAATACCCGCAACGATAAATGCGATCACTGCTGCTAATAACCAATATCAAGTGGCAGGTATTAACAGTGACGAATTAAATACAGCTCTGGataaaggtaattttgattcccacgaatttgaaaatttgtgcTCGAATTTGTTAAATTCGGGACCGATTGAAGATTTATATGTGGGAAATTTTCTTACCATGGATGGTCAGGGTGCTCATGAAACTGAACGCGACGTTAAACCATACCAACTGTCCAGAAGggtGTTAACTCCAGAGGAAGTAAAGATGTTGAAAACTGTTAAACACGTCCTAACTGCTTTCCTCAAAACGAACCCTCCTGAGGATAGAATAATAGCGATGTACAATCAATTTTTCGAAAATAAAGAATACATAACAAGTGCAAATAACACGATTCTTCATCTTTTGGTGATAGAAAATAGTAACGACATTAGTAATCTTCTAAAatcaataataaagtttttaaaagataacaaaaaaactaattatctTAACATGCAAAATAATGATTCTAAAACGGCATTGCATTTTGCCGTTGAACTTCAGGCCGAAAGTATCGTCGCTCATTTAACCAATGCGGGAGCAAGTGGTAATATTCAAGACCGTAAGGGCAATACAGCTTTACACTTGGCTATTTATAATTTGCCTAGTCTTTCAATCAAATCGTTGTTAAATCGACACTGCGATCCAAATATAGACAACTTCGAGGGTCACACACCGTTACATATAGCAGTAAAAACGAATAATGTGGTTGCATGTGCCACCTTAAAAAGTCATGGAGCCAACGTCAACGCGATCGATAAAAAGAACGGATATACGCCTTTGCACATGGCGGTACAAGACGGTAATCTTgaaattgttcaatttttaatcTCGACGGGTGAAGTGAACATTTATGAAGATTACGGAGAATGTAGCGCCTTGCGGCTTGCAAAGGTAATGATCAAGGACGATCAGCCCGACACGAAAACAATATACAATGCATTGGAGAACTTTATGaaaaagaaAGGAATTTTTGAAGAAGTTGAAATTAAGGAAGAAATTGAGGAAGATGAGGAAGAAGATGATATGATGGAGATTGATAGCGGTGTAATAAAAATAGAACCTTGTTCTCCGGGCTCTTTGAGGCACAAGTACGAAGATATTAAAGGTTTTACAGATGAAACCATGGCCGAGGTTTCAGAAATATTAGATAAATCAGGAACATGGGAGAATTTAGCAGACTTATTAGATCATGGGTATTTAGTAAAGTCCTCGGACTTTCTTACTTCAACAAACGCACCTTCTAGGAGTTTATTAAATCTTGCTCTCGCTAGCGGCGATACCGTTTTACAAATTAGAGATTTCTTGGAAAATTTAGATGAAGTAAGAGCTGTGCAGTTAATCGACGATATGGTTAGGAATCAGTTTTAA
- Protein Sequence
- MLSFQPQSTNFTPNYYDNAQGTHLDMSNYINVLTPPTESSDSMMYSPKGDCLSPPQYIQYIQPPLERLQGHKPYLTVLEEPVERFRFRYKSEMSGTHGSLNGKSSDRARKQTYPTVKVHNVNVPLTVRCSLYQWGREDMAHRRQPHAHRLVRKHEGEEKDDPHSVQVNAENDYIANFHSMGIIHTAKKYIVPELIKKYINLKQEEIARTEGKYRQLTKKEDIDIREMAEKESKCINLNIVCLRFEAFEIRNNIYCPVGQPVYSNAINNLKSALTGDLKIVRMDHCTSPCNGGREIFILVEKVTKKNIKVRFYELDDDDNEIWSDYGRFTDLDVHHQYAIVFKTPPYRNQTINSQVRVYIELERPSDSAKSDPKDFTYTPSEIMCGRKRVRYSHSSSYNSKSFSSSEIPATINAITAANNQYQVAGINSDELNTALDKGNFDSHEFENLCSNLLNSGPIEDLYVGNFLTMDGQGAHETERDVKPYQLSRRVLTPEEVKMLKTVKHVLTAFLKTNPPEDRIIAMYNQFFENKEYITSANNTILHLLVIENSNDISNLLKSIIKFLKDNKKTNYLNMQNNDSKTALHFAVELQAESIVAHLTNAGASGNIQDRKGNTALHLAIYNLPSLSIKSLLNRHCDPNIDNFEGHTPLHIAVKTNNVVACATLKSHGANVNAIDKKNGYTPLHMAVQDGNLEIVQFLISTGEVNIYEDYGECSALRLAKVMIKDDQPDTKTIYNALENFMKKKGIFEEVEIKEEIEEDEEEDDMMEIDSGVIKIEPCSPGSLRHKYEDIKGFTDETMAEVSEILDKSGTWENLADLLDHGYLVKSSDFLTSTNAPSRSLLNLALASGDTVLQIRDFLENLDEVRAVQLIDDMVRNQF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00927275;
- 90% Identity
- iTF_01291244;
- 80% Identity
- -