Lyun016083.1
Basic Information
- Insect
- Lycocerus yunnanus
- Gene Symbol
- Rel
- Assembly
- GCA_036346125.1
- Location
- JARFIX010000031.1:1917480-1925174[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.3e-36 2.9e-32 113.2 0.6 1 168 50 243 50 244 0.86 2 2 3.7 3.2e+04 -4.1 0.1 105 139 723 751 715 753 0.48
Sequence Information
- Coding Sequence
- ATGAGTAATTACATAAATGTCTTGACGCCACCGACGGAGTCGTCGGATTCGAGCATGTTTTCACCAAAGGGCGAGTGTTTGTCGCCGCCACAATATATCCAATGTTTTCAACAACCTTTCGAGAGGTTACCAGCTCATAAACCATATTTAACTGTACTGGAGGAACCTGTGGAACGATTCAGGTTTCGATACAAATCTGAAATGTCTGGGACCCATGGATCGTTAAATGGCAAATCATCTGATCGAGCCCGCAAACAGACATACCCAACAGTcaagatCCACAATGTAAACATACCCTTGATAATACGCTGCTCTCTTTACCAATGGGGACGTGAAGATATGGCTCATAGGCGTCAGCCTCATGCACATCGTCTTGTTAGAAAACAAGAAGGTGCTGAGATGGACGACCCTCACAGTGTAACTGTGAGTTCTGACAACGATTATACAGCAAATTTTCACAGCATGGGAATCATCCATACAGCCAAAAAATACATCGTCCcggagttatttaaaaaatatatgaatttAAAACGAGAAGAAATTGCTCGAGTGGAAGGAAAGTACCGATCCCTCACGAAAAAGGAAGAAATTGACattcGGGAAATGGCAGAAAAAGAAAGCAAATGCATAAACTTAAATATCGTGTGTTTACGTTTTGAAGCATTTGAAGTCcgtaacaatattttttatccaGTTGGACAACCCGTTTACTCcaatgcaattaataatttaaagagcGCTTTGACAGGTGATTTGAAAATTGTACGCATGGACCACTGCACCAGCCCGTGTAATGGTGGTCGCGAGATTTTCATTTTAGtagaaaaagttacaaaaaAAAATATTAAAGTGAGATTTTACGAGTTGGACGATGACGATAATGAAATATGGAGTGACTATGGTCGATTTACTGACTTGGATGTACATCATCAATATGCTATTGTTTTTAAGACGCCCCCATATCGGAACCAGAGTATTGACAGTCAGGTTCGGGTTTATATAGAATTAGAGAGGCCTTCCGACAGTGCCAGAAGTGACCCAAAAGACTTTACATACACGCCGTCTGAAACCATGTATGGTAGAAAACGCGTTAGATACACTACCAGTTGCAGTTACAATAGTTCGAGCTTCTCAAGCAGTGAACTACCTGCAACTATTAATTCAGTCAATGCTGGTGGTAATCATTACCAAATTAGTGGGATCAATAGCGACGAATTAAACGCGGCGGTAGGCAAAAGTGATCTCAACTCGCACGAATTCGACAAGTTATGTTCGCAATTATTGAATTCTGGACCCATTGAAAATTTGTATGCCGAAGATATAACAAGTTTGATCTTAGATGGTGTTGCCGATGAAACTGAACGTGACGTTAAACCACAACAACCGCCCAGATCCATTGTAAGGGTATTAACTCCAGCAGAAACGAAAACGTTAGAAGATATTAAAGTCGTACTAACAGCATTCCTCAAAACACGGCCTCCAGAGGATAGGGTATTGGCAATGGTTAATCGATTTTTTGAAGATAAACAATATATCACAAGTACAAATAACACGATTCTTCATCTTTTGGTGATCGAAAATATTGACAGTGCtagttttttgaaatcaataatacaagttttgaaaaatcataaaaagaCCAGTTACTTGAACATGAAAAATGATGATGGAAAAACCGCATTGCATTTTGCCATCGAACTTCGGAGTGAAGTAGTAGTTGCACATTTGCTTAACGCTGGGGCTGATGGTAACATCCAAGATAATAAGGGAAATACGGCTCTACACTTAGCTGTTTATAATTTGCGTTCTATTTCGATCAAATCATTGTTAAATCGACAGTGTGACCCCAACATATATAACTTTGAGGGCCACACACCATTACATTTGGCAGTTAAAACAAATAACTTGCCTCTTTGTATCACCTTAAAAAGTCAAGGAGCTAATGTCAACTCAATCGATAAGAAGAATGGATTTACGCCTTTGCACATGGCGGTGCAAGACGGCAACTTAGAAATTGTTCAATTTCTAATCTCGACCGGAGAAGTCAATATTTACGAAGATTATGGAGAGTGTAGCGCCTTAAGGCTTGCAAAAGTATTGGTCAAGGAAGATCAACCTTGTACGCTCCAAATTTACAATACCTTGGAGAGCTTTATGaaacATAAGGGAATTTTTGAAGAAGTTGAAATTAAGGAAGAGATTGAGGAAGAtgacgaagaagaagatatgATGGACATTGAAACGAATACAGTGAAACTGGAGCCTTCATCTCCTGGCTCTTTAAGAAGCAAGTACGAAGATGTTAAAGGTTTTACAAGTGAAACCATGGCCGAGGTTTCAGAAATATTAGATAAATCAGGAACTTGGGAGAATTTAGCAGATTTATTAGATCATGGTTATTTGTTAAAATCCTCGGATTTCTTTACTTCGACGAACGCACCATCTAGAAGTTTACTAAACTTTGCTctcGCTAGCGGCGATACCGTCTTGCAGATTagagattttttggaaaatttagatGAAGTAAGGGCTGTTCAGTTAATTGATGATATGGTTAggcatcaattttaa
- Protein Sequence
- MSNYINVLTPPTESSDSSMFSPKGECLSPPQYIQCFQQPFERLPAHKPYLTVLEEPVERFRFRYKSEMSGTHGSLNGKSSDRARKQTYPTVKIHNVNIPLIIRCSLYQWGREDMAHRRQPHAHRLVRKQEGAEMDDPHSVTVSSDNDYTANFHSMGIIHTAKKYIVPELFKKYMNLKREEIARVEGKYRSLTKKEEIDIREMAEKESKCINLNIVCLRFEAFEVRNNIFYPVGQPVYSNAINNLKSALTGDLKIVRMDHCTSPCNGGREIFILVEKVTKKNIKVRFYELDDDDNEIWSDYGRFTDLDVHHQYAIVFKTPPYRNQSIDSQVRVYIELERPSDSARSDPKDFTYTPSETMYGRKRVRYTTSCSYNSSSFSSSELPATINSVNAGGNHYQISGINSDELNAAVGKSDLNSHEFDKLCSQLLNSGPIENLYAEDITSLILDGVADETERDVKPQQPPRSIVRVLTPAETKTLEDIKVVLTAFLKTRPPEDRVLAMVNRFFEDKQYITSTNNTILHLLVIENIDSASFLKSIIQVLKNHKKTSYLNMKNDDGKTALHFAIELRSEVVVAHLLNAGADGNIQDNKGNTALHLAVYNLRSISIKSLLNRQCDPNIYNFEGHTPLHLAVKTNNLPLCITLKSQGANVNSIDKKNGFTPLHMAVQDGNLEIVQFLISTGEVNIYEDYGECSALRLAKVLVKEDQPCTLQIYNTLESFMKHKGIFEEVEIKEEIEEDDEEEDMMDIETNTVKLEPSSPGSLRSKYEDVKGFTSETMAEVSEILDKSGTWENLADLLDHGYLLKSSDFFTSTNAPSRSLLNFALASGDTVLQIRDFLENLDEVRAVQLIDDMVRHQF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00272232; iTF_00269522; iTF_00270820; iTF_00267904; iTF_01293342; iTF_01291244;
- 90% Identity
- -
- 80% Identity
- -