Basic Information

Insect: Rhagonycha fulva
Gene Symbol: Zfpm1
Assembly: GCA_905340355.1
Location: HG996556.1:9563986-9575200[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 4.4 1.3e+02 4.2 2.0 1 23 481 504 481 504 0.84

2 14 0.36 10 7.6 0.2 3 23 593 614 592 614 0.94

3 14 0.081 2.3 9.7 0.4 1 23 622 644 622 644 0.98

4 14 0.00085 0.025 15.9 1.7 2 23 647 668 646 668 0.97

5 14 0.015 0.43 12.0 2.1 1 23 674 696 674 696 0.98

6 14 0.0001 0.0029 18.8 5.4 2 23 703 724 702 725 0.95

7 14 6.4 1.9e+02 3.7 1.6 5 23 738 756 737 756 0.97

8 14 0.00024 0.007 17.6 3.5 3 23 763 784 762 784 0.97

9 14 0.48 14 7.2 0.0 2 23 800 820 799 820 0.95

10 14 0.00097 0.028 15.7 1.4 1 20 826 845 826 848 0.92

11 14 0.00031 0.0088 17.3 0.2 1 23 856 878 856 878 0.99

12 14 0.0033 0.095 14.0 3.7 1 23 884 906 884 906 0.98

13 14 6.9e-06 0.0002 22.5 3.7 1 23 912 934 912 934 0.99

14 14 0.0043 0.12 13.7 6.7 1 23 940 962 940 963 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	4.4	1.3e+02	4.2	2.0	1	23	481	504	481	504	0.84
2	14	0.36	10	7.6	0.2	3	23	593	614	592	614	0.94
3	14	0.081	2.3	9.7	0.4	1	23	622	644	622	644	0.98
4	14	0.00085	0.025	15.9	1.7	2	23	647	668	646	668	0.97
5	14	0.015	0.43	12.0	2.1	1	23	674	696	674	696	0.98
6	14	0.0001	0.0029	18.8	5.4	2	23	703	724	702	725	0.95
7	14	6.4	1.9e+02	3.7	1.6	5	23	738	756	737	756	0.97
8	14	0.00024	0.007	17.6	3.5	3	23	763	784	762	784	0.97
9	14	0.48	14	7.2	0.0	2	23	800	820	799	820	0.95
10	14	0.00097	0.028	15.7	1.4	1	20	826	845	826	848	0.92
11	14	0.00031	0.0088	17.3	0.2	1	23	856	878	856	878	0.99
12	14	0.0033	0.095	14.0	3.7	1	23	884	906	884	906	0.98
13	14	6.9e-06	0.0002	22.5	3.7	1	23	912	934	912	934	0.99
14	14	0.0043	0.12	13.7	6.7	1	23	940	962	940	963	0.96

Sequence Information

Coding Sequence: ATGGAATCAGAAAATACGGTTTGCCCCGTTTGTACCTTGTACTTGAGACCAGGAATAACGTTGAAATCTCATCTGACGAGCCACCCGAAACAGAAGGTGATTGATGCTCTGGTCAACCTGACCTGCACTGCAAGGAGTGATGTTAAAGATGTGGCAATTATCACCAATCAATCTTGCGGGGAGGAACCGAATCTTCCAATACAAAGTACTCCAACTTGGACTCAACCGACTACTGGGTTTAATCCGATTCCTACCAACCATGCCGCCTTCATTTACCAACAGTTTATGAGTACTACCAGTCAACCTCCGCCAAATGCGTCCAGTGTGAACCCAGTCGGTCAGCAATACATAACAATTCCTACCGTTTTTAATCCCCAAGTTATGTGTCAGCCGTATGTTTACCAACAACAACAGGTGATTATGTCTGCGGGTACTACCGTACCATCCTTGTCCCCTTTGCTTCGTAAACCACAAATAATAGACGTTTCTAACGATGTGGAAACTTCGACAACAGAAATCGCAGCTAGTAATAATTTTGAAGAAGAACAAATCGAGGAAGACTTGAAACACGATTCTTCTAAGGAGGAAGAGGAGGATGAACAAGAGAATGAAATAGAATCGAAAGTGAAGTTTCAGAAGGAAGAAGAAATAGATATTGAGATTGATGAACCTGCTTATTCGGAAGATTACGAAAATGTTGACTCTCCTACTTCCAGTGCTGGATCAGATTACGCCCAAGATAGGTCAGAATTGAACAAAGCTTGCCAGACTCTACAATCACCACAGACTGAAACAGAAGACACTAATCCTCAAGAAAATGGAGAAGAGGAATGTTTTAATGAGAATGAGGTTGAATGTGAAGAGGATTCAAATCATGCAAAGGAATTTGATGAAGTTGAATATGAATGCAACAATTTAACTGTTGTTCAGACTAATGATCAAGTTATAGATATGGATGGAATGCAGTTAATTTTGTGTAACAATTTTATGGGAAGTCAGCTGATATCACAGGTTGATGATTTTGATTGTTTGAATAATCGTCCTGAAAGGGCAGTGCTGATGAATATTGGGGGTATTGATGGAGGTTCCGTAATTGCTGTATCTGATGCCAATGTTAATATAGAACAGTTAGCCGAAGAGAGTGTTTCTCGTGAGAGTACCAACATGAGTATTCGAGCTGATGAACGTATGCCACCAAGGGGGGAATTGTCAGGACAGGAAAGTAACGGAGCTGCAAGCGACATAGCCTGGAGTAGAATGCAATACGAAAGTAATTCTGCTACTTCAACATCCTATGATTTATTGGCACGTGAAACCTGGGAAGGTTCTGACTGTTCCGATTCGGAAGTACCACCACTACAAAGTCGTGTTCCGCTAAAAGGAGAAATTTACGCAGAAGACTCTCCAACAATTATAAACATAATAGAAGCGCCGTTAAATTTCAAGTGTTCAAGTTGTGGTGAAAGATTCGTATGTGTAAAAGAACGTCGCAGACACCAAATAGAAGTTCATGCTGATAAAGAAGAAAGTGATAAAAGTTGTCCACCTAAAAGCAATAATATTATTGGTTCAAAAATAAGCAAGAAAGGTGTTAAAAAATTGGTGATTAAACCGAAGACCAGCAATATTAAAACTGAAAATAACTTTGATAACGTTTTTACTAATAAAATTGAAATTAGTTTGGAAAATAATGATCATGCAGAACCAGAAGAAATGAAGGTTGTTGTCGTACCTGATCGGGATATCGATGCTAAAGAGAATGTTAAATTACCTTTGTGTCGTTTATGTAATCTTCCATTTCCAGATGCTTTTAAATTAAAATTACACAGACAAGATGTTCATAGTAAAAAAAGTATTAATCGTTATAAATGTGATACGTGTGGAGAAAATATGGCCAATGAGAATAAATTTAATGAACATTTAAAAATACATCCCCTGGAGTGTAGACTGTGCGGCAAATATTTTTATAGACGTCAAAATATTCAACTCCACATGAAAAGGCATCTAGGGATCAAGCCATATATGTGTGATTTTTGTGAAAAATCGTTTTTAACCAAACAGAAATTGGAAGAACATAAAAACACGCATACGGGGGAAGCACCAATCAAGTGTACAATGTGTGATGAAACTTTCAGAAGGCATTCCAATTTAGTACAGCACAGAAACCGTCATCATTTAAATATTAAAAAAAAAATTAAGGATTACATTTGTTATTGTGGTGAAATAACGCATTCGAAAAAGAAATTTGCATGGCACCAAGAGACGCATGATTTGAAGCCAAAGGCGTGTACCCACTGCAATGAAAAGTTTGTGCACATGGCAAGTTTAACGAGACACATGAGAAGGGCGCATAATAAACTGTTTGTGCCTTCAGAAGAGAGGAATAACGAAAATGTGGAATGTCCAGTATGTAAAGGAATTTATTTGCGGTCGTCATTGGAAGCTCATATTAGGAACCATAGCGGAAGTAGGCCTTTTTCCTGTTTGATTTGTAATAAGGATTTTACCACCAAGTGGAACCTAAAATTACACAAATGGACACATGCCGCTCGTGCTTCTAAACCTTATAAATGCGATCAGTGTAAGGGAGCATTTATTAGGGAAAGTGATTACATAGCTCACATGAATTCTCACAAAAGTGTGAGACCCTACACTTGTAATTATTGTGGTGCTCAATTTATCCGAAAGTACAACTGCCAGAGGCACGTTAAAGAGCACGAGATAGACAAAACCTACACATGCACCATTTGTAATAAAGGTTTTCATAGGTCATATTATCTTAAAGATCATATGCGCGTTCACAGTGGGATTAGGCCTTACTCATGCCATATTTGTGGTAAAACTTCCACTACCAAATCTAATCACAACAAGCACGTGATGATACATCACGCTAAAGAGCCAGTAAGCACCGAAAATTGA
Protein Sequence: MESENTVCPVCTLYLRPGITLKSHLTSHPKQKVIDALVNLTCTARSDVKDVAIITNQSCGEEPNLPIQSTPTWTQPTTGFNPIPTNHAAFIYQQFMSTTSQPPPNASSVNPVGQQYITIPTVFNPQVMCQPYVYQQQQVIMSAGTTVPSLSPLLRKPQIIDVSNDVETSTTEIAASNNFEEEQIEEDLKHDSSKEEEEDEQENEIESKVKFQKEEEIDIEIDEPAYSEDYENVDSPTSSAGSDYAQDRSELNKACQTLQSPQTETEDTNPQENGEEECFNENEVECEEDSNHAKEFDEVEYECNNLTVVQTNDQVIDMDGMQLILCNNFMGSQLISQVDDFDCLNNRPERAVLMNIGGIDGGSVIAVSDANVNIEQLAEESVSRESTNMSIRADERMPPRGELSGQESNGAASDIAWSRMQYESNSATSTSYDLLARETWEGSDCSDSEVPPLQSRVPLKGEIYAEDSPTIINIIEAPLNFKCSSCGERFVCVKERRRHQIEVHADKEESDKSCPPKSNNIIGSKISKKGVKKLVIKPKTSNIKTENNFDNVFTNKIEISLENNDHAEPEEMKVVVVPDRDIDAKENVKLPLCRLCNLPFPDAFKLKLHRQDVHSKKSINRYKCDTCGENMANENKFNEHLKIHPLECRLCGKYFYRRQNIQLHMKRHLGIKPYMCDFCEKSFLTKQKLEEHKNTHTGEAPIKCTMCDETFRRHSNLVQHRNRHHLNIKKKIKDYICYCGEITHSKKKFAWHQETHDLKPKACTHCNEKFVHMASLTRHMRRAHNKLFVPSEERNNENVECPVCKGIYLRSSLEAHIRNHSGSRPFSCLICNKDFTTKWNLKLHKWTHAARASKPYKCDQCKGAFIRESDYIAHMNSHKSVRPYTCNYCGAQFIRKYNCQRHVKEHEIDKTYTCTICNKGFHRSYYLKDHMRVHSGIRPYSCHICGKTSTTKSNHNKHVMIHHAKEPVSTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01294244; iTF_00273041; iTF_00269011; iTF_00270325; iTF_00271741; iTF_00928029;
90% Identity: iTF_00273041;
80% Identity: -