Basic Information

Insect: Lycocerus yunnanus
Gene Symbol: Zfpm1
Assembly: GCA_036346125.1
Location: JARFIX010000001.1:11555611-11559531[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.79 84 5.1 2.3 1 20 476 495 476 499 0.75

2 14 0.059 6.3 8.7 0.9 2 23 585 607 585 607 0.94

3 14 0.011 1.2 11.0 0.8 1 23 615 637 615 637 0.99

4 14 0.0003 0.032 15.9 1.7 2 23 640 661 639 661 0.97

5 14 0.005 0.54 12.0 2.1 1 23 667 689 667 689 0.98

6 14 3.6e-05 0.0038 18.8 5.4 2 23 696 717 695 718 0.95

7 14 2.2 2.4e+02 3.7 1.6 5 23 731 749 730 749 0.97

8 14 0.0028 0.3 12.8 3.5 3 23 756 777 755 777 0.97

9 14 0.17 18 7.2 0.0 2 23 793 813 792 813 0.95

10 14 0.00048 0.051 15.2 0.9 1 20 819 838 819 841 0.91

11 14 0.00011 0.011 17.3 0.2 1 23 849 871 849 871 0.99

12 14 0.0012 0.12 14.0 3.7 1 23 877 899 877 899 0.98

13 14 2.4e-06 0.00026 22.5 3.7 1 23 905 927 905 927 0.99

14 14 0.0015 0.16 13.7 6.7 1 23 933 955 933 956 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.79	84	5.1	2.3	1	20	476	495	476	499	0.75
2	14	0.059	6.3	8.7	0.9	2	23	585	607	585	607	0.94
3	14	0.011	1.2	11.0	0.8	1	23	615	637	615	637	0.99
4	14	0.0003	0.032	15.9	1.7	2	23	640	661	639	661	0.97
5	14	0.005	0.54	12.0	2.1	1	23	667	689	667	689	0.98
6	14	3.6e-05	0.0038	18.8	5.4	2	23	696	717	695	718	0.95
7	14	2.2	2.4e+02	3.7	1.6	5	23	731	749	730	749	0.97
8	14	0.0028	0.3	12.8	3.5	3	23	756	777	755	777	0.97
9	14	0.17	18	7.2	0.0	2	23	793	813	792	813	0.95
10	14	0.00048	0.051	15.2	0.9	1	20	819	838	819	841	0.91
11	14	0.00011	0.011	17.3	0.2	1	23	849	871	849	871	0.99
12	14	0.0012	0.12	14.0	3.7	1	23	877	899	877	899	0.98
13	14	2.4e-06	0.00026	22.5	3.7	1	23	905	927	905	927	0.99
14	14	0.0015	0.16	13.7	6.7	1	23	933	955	933	956	0.96

Sequence Information

Coding Sequence: atggaATCTGAAAATACAATTTGTCCCGTTTGCACCCTATATTTAAGGCCGGGTATAACGTTGAAGTCTCATTTAACAAGTCACCCGAAACAGAAAGTGATAGATGCCCTGGTCAATTTGACCTGTGCTACAAGGAGCGATGCCAAAGATGTTGCAATTATCACCAATCAAACTTGCGGCGAGCCCAATATTCCAATACAAACTGGACCGAATTGGACTCAACCGACGACCGGATTTAATTCGATACCCACCAACCATGCCTTCATTTATCAACAGTTTATGAGTACCACCAGTCAACCTCCGCCAAATGCGTCCACCGTGAATCCAGTAGGTCAGCAATACATAACAATTCCTACCGTTTTTAATCCGCAAGTTATGTGTCAGCCTTATGTTTACCAACAACAGCAGGTGATTATGTCGGCAGGCACTACCGTACCATCTCTGGCCCCTTTACTTCGTAAACCACAAATAATAGACGTTTCTCATGAAGTGGAAACTTCTACAGAAATCGTTTCGAGTAATTTCGAAGATCAGATCGACGATGAGCAGAAAGGTCTTACCAAGGAGGATGATGAAGAAGAGCACCAAATggaacaaaaattgcaaaaacttcATAAGGAAGAGGATATTGACATTGATTCATATTCGGAAGAATATGAAAATACTGCTTCTCCTGCTTTCAGTACAGAATCAGATTATGTGCCAGATAGGTCTGAGTTAAACAAAGCATGCCAGACTTTACAATCACCACATACTGAAATGGAAGATACAAATCTTCAAGAAGAAAATGCCGAGGACgaatgttttaatgaaaatgcCGATAACGAGGTTGAAGTAGAAGAAGATTCCAATCAAGCAAAAGAGTTTGATGAAAACGAAGTTGAATATGAATGTAATAATTTAGCCGTTGTTCAAACAAACGATCAAGTTATAGATATGGATGGAATGCAGTTAATTTTGTGTAACAATTTTATGGGAAGTCAATTGATATCGCAGGTTGATGATTTTGATTGCTTGAATAATCGACCGGAAAGGGCAGTTCTAATGAATATTGGTGGTATTGATGGAGGCTCCGTGATTGCCGTATCCGATGCTAATGTCAATATGGAACAGTTAGTAGAAGAGAGCGTTTCTCGTGAAAGTACCAACATGAGCATACGGGCCGATGAACGTATGCCACCAAGAGGGGAATTGTCAGGACAGgaAAGTAATGGAGCTGCAAGCGACATAGCCTGGAGTAGAATGCAATATGAAAGTAATTCTGCTACTTCAACGTCCTATGATTTGTTGGCACGTGAAACATGGGAAGGTTCCGACTGTTCCGATTCAGAAGTACCACCGCTACAAAGTCGTGTGCCTCTAACAGGAGAAACTTATGCAGAAGACGTTCCAACAATTATAAACATAATTGAAGCTCCGTTAAATTTCAAGTGTTCAAGTTGTGGTAAAAGATTCGCATGTGTTAAAGAACGACGCACACATCAAATTGAAGTTCATGCTGAAAAGGATGAAAGTGATAAAAGTTCTCCAACTAAAAGCAATAATATTATTGGTTCGAAAATTAGCAAGAAAGGTGTTAAAAAATTGGTGATCAAACCCAAGACCACCaatattaaaactgaaaataactTTGATAAtgtttttactaataaaattgaagttgGTTTGGAAAATAACGATGATATAGAACCAGAAGTAAAGCTTTTGAGGCCGGAGGGGGATATCGATGCTAAAGAGAATATTAATTTACCTCAGTGTCGTTTATGCCACCTTCCATTTCCAgatgcttttaaattaaaattacatagaCAAGATGTTCACagtaaaaaaagtattaatcgTTATAAATGTGATACGTGTGGAGAAAATATGACTAACGagacaaaatttaatgaacatttaaaaatacatccCCTAGAGTGTAGACTctgtggaaaatatttttatagacgtCAAAATATTCAACTCCACATGAAGAGGCATCTGGGAATTAAGCCGTACATgtgtgaattttgtgaaaaatcgtTTTTAACGAAACAGAAATTGGAAGAACACAAAAACACACATACGGGGGAAGCACCAATCAAGTGTACCATGTGTGACGAAACCTTCAGAAGGCATTCCAATTTAGTGCAGCATAGAAACCGTCACCATTTGaacattaaaaagaaaattaaggaTTACATTTGTTATTGTGGCGAAATTACACattcaaagaaaaaatttgccTGGCACCAAGAAACTCACGATTTGAAACCAAAAGCGTGTATGCACTGCAACGAAAAGTTTGTGCACATGGCAAGTTTAACGAGACACACAAGAAGGGCGCATAATAAACTGTTTGTGCCTTCAGAGGAGAGGAATGGTGAAAATGTGGAATGTCCGGTGTGCAAAGGAATTTATTTGCGGTCATCGTTAGAAGCGCATATTAGGAATCATAGCGGAAGTAGGCCTTTTGCGTGTTTGATTTGTAATAAAGATTTCACTACCAAGTGGAACCTGAAGTTGCATAAATGGACACATGCCGCTCGTGCTTCTAAACCTTATAAATGTGATCAGTGTAAAGGAGCATTTATTAGAGAAAGTGATTACATAGCTCACATGAATTCTCACAAAAGTGTGAGACCCTACACTTGTAATTATTGTGGTGCTCAATTTATTCGAAAATATAACTGCCAGAGACATGTAAAAGAACACGAGATAGATAAAACTTACACATGCACCATTTGTAATAAAGGTTTTCATAGGTCATATTATCTTAAAGATCATATGCGTGTTCACAGCGGGATTAGGCCTTACTCATGTCATATTTGTGGTAAAACTTCCACTACCAAATCTAATCATAACAAACACGTGATGATACATCACGCTAAAGAGCCAGTAAGCACTGAAAATTGA
Protein Sequence: MESENTICPVCTLYLRPGITLKSHLTSHPKQKVIDALVNLTCATRSDAKDVAIITNQTCGEPNIPIQTGPNWTQPTTGFNSIPTNHAFIYQQFMSTTSQPPPNASTVNPVGQQYITIPTVFNPQVMCQPYVYQQQQVIMSAGTTVPSLAPLLRKPQIIDVSHEVETSTEIVSSNFEDQIDDEQKGLTKEDDEEEHQMEQKLQKLHKEEDIDIDSYSEEYENTASPAFSTESDYVPDRSELNKACQTLQSPHTEMEDTNLQEENAEDECFNENADNEVEVEEDSNQAKEFDENEVEYECNNLAVVQTNDQVIDMDGMQLILCNNFMGSQLISQVDDFDCLNNRPERAVLMNIGGIDGGSVIAVSDANVNMEQLVEESVSRESTNMSIRADERMPPRGELSGQESNGAASDIAWSRMQYESNSATSTSYDLLARETWEGSDCSDSEVPPLQSRVPLTGETYAEDVPTIINIIEAPLNFKCSSCGKRFACVKERRTHQIEVHAEKDESDKSSPTKSNNIIGSKISKKGVKKLVIKPKTTNIKTENNFDNVFTNKIEVGLENNDDIEPEVKLLRPEGDIDAKENINLPQCRLCHLPFPDAFKLKLHRQDVHSKKSINRYKCDTCGENMTNETKFNEHLKIHPLECRLCGKYFYRRQNIQLHMKRHLGIKPYMCEFCEKSFLTKQKLEEHKNTHTGEAPIKCTMCDETFRRHSNLVQHRNRHHLNIKKKIKDYICYCGEITHSKKKFAWHQETHDLKPKACMHCNEKFVHMASLTRHTRRAHNKLFVPSEERNGENVECPVCKGIYLRSSLEAHIRNHSGSRPFACLICNKDFTTKWNLKLHKWTHAARASKPYKCDQCKGAFIRESDYIAHMNSHKSVRPYTCNYCGAQFIRKYNCQRHVKEHEIDKTYTCTICNKGFHRSYYLKDHMRVHSGIRPYSCHICGKTSTTKSNHNKHVMIHHAKEPVSTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01292569;
90% Identity: iTF_00273041;
80% Identity: -