Basic Information

Insect: Cantharis nigra
Gene Symbol: Zfpm1
Assembly: GCA_958510845.1
Location: OY294030.1:33402909-33408378[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 3.9 2e+02 3.5 2.9 1 23 475 498 475 498 0.80

2 14 0.18 9.7 7.7 0.3 2 23 585 607 585 607 0.93

3 14 0.025 1.3 10.4 0.2 1 23 615 637 615 637 0.99

4 14 0.00046 0.024 15.9 1.7 2 23 640 661 639 661 0.97

5 14 0.0081 0.43 12.0 2.1 1 23 667 689 667 689 0.98

6 14 5.5e-05 0.0029 18.8 5.4 2 23 696 717 695 718 0.95

7 14 3.5 1.8e+02 3.7 1.6 5 23 731 749 730 749 0.97

8 14 0.00013 0.0069 17.6 3.5 3 23 756 777 755 777 0.97

9 14 0.26 14 7.2 0.0 2 23 793 813 792 813 0.95

10 14 0.00034 0.018 16.3 1.4 1 20 819 838 819 841 0.92

11 14 0.00017 0.0087 17.3 0.2 1 23 849 871 849 871 0.99

12 14 0.0018 0.093 14.0 3.7 1 23 877 899 877 899 0.98

13 14 3.8e-06 0.0002 22.5 3.7 1 23 905 927 905 927 0.99

14 14 0.0023 0.12 13.7 6.7 1 23 933 955 933 956 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	3.9	2e+02	3.5	2.9	1	23	475	498	475	498	0.80
2	14	0.18	9.7	7.7	0.3	2	23	585	607	585	607	0.93
3	14	0.025	1.3	10.4	0.2	1	23	615	637	615	637	0.99
4	14	0.00046	0.024	15.9	1.7	2	23	640	661	639	661	0.97
5	14	0.0081	0.43	12.0	2.1	1	23	667	689	667	689	0.98
6	14	5.5e-05	0.0029	18.8	5.4	2	23	696	717	695	718	0.95
7	14	3.5	1.8e+02	3.7	1.6	5	23	731	749	730	749	0.97
8	14	0.00013	0.0069	17.6	3.5	3	23	756	777	755	777	0.97
9	14	0.26	14	7.2	0.0	2	23	793	813	792	813	0.95
10	14	0.00034	0.018	16.3	1.4	1	20	819	838	819	841	0.92
11	14	0.00017	0.0087	17.3	0.2	1	23	849	871	849	871	0.99
12	14	0.0018	0.093	14.0	3.7	1	23	877	899	877	899	0.98
13	14	3.8e-06	0.0002	22.5	3.7	1	23	905	927	905	927	0.99
14	14	0.0023	0.12	13.7	6.7	1	23	933	955	933	956	0.96

Sequence Information

Coding Sequence: atggAATCTGAAAATACAGTTTGTCCCGTTTGCACCCTATATTTAAGACCGGGCATAACGTTAAAATCTCACTTGACGAGTCACCCGAAACAGAAAGTGATAGATGCTCTGGTCAACTTGACCTCCACCGTGAGAAACGATGCCAAAGATGTTGCAATTATCGCCAATCAATCTTGTGGTGAGACTAATCTTCCAATACAAGGTGCTCCGAATTGGACTCAACCCACGACCGGTTTTAATTCAATACCCACCAACCATGCCTTCATCTATCAACAGTTTATGAGCACCACCAGTCAACCTCCACCTAATACGTCCACCGTGAATCCAGTAGGTCAACAATACATAACAATTCCTACCGTTTTTAACCCACAAGTTATGTGTCAGCCTTACGTTTACCAACAACAACAGGTGATTATGTCTGCAGGCACTACCGTACCATCTCTGACCCCATTACTTCGTAAACCTCAAATAGTAGACGTTTCTAATGAAGTAGAAACTTCAACAGAAGTCGTCTCCAGTAATTTTGGAGATCAGGTCAATGAAGAACCGAAAGATTTGTCCAAACAGGAACAAGAGGACGAACTGGAAcgcaaagtaaaaaattatcctCTTCACAAGGAAGAGGATATTGAAGATCTCGATTATTCAGAAGAATACGAAAATGTTGCTTCTCCTACTTTCAGTGCTGGGTCAGATTACGTGCCAGATAGATCTGAATTAAACAAAGCTTGCCAGACTCTACAATCACCGCAGACTGAAATGGAAGACACAAACCTTCATGAAAACGGCGAAGATGACTGTTTTAATGAAAATGCTGATGAAAATGGAGTTGAAGGTGAAGAAGATTCGAATCAAGAAAAGGAGTTTGATGAAAATGAAGAATACGAATGTAATAATTTAGCTGTTGTTCAGACCAACGATCAAGTTATAGATATGGACGGAATGCAGTTAATTTTGTGTAACAATTTTATGGGGAGTCAATTAATATCGCAAGTTGATGATTTTGATTGCTTGAATAATCGACCCGAAAGGGCAGTTTTGATGAATATTGGGGGTATCGATGGTGGGTCTGTGATTGCCGTATCTGATGCTAATGTCAATATTGAACAGCTAGTAGAAGAAAGCGTTTCTCGTGAAAGTACCAACATGAGTATACGAGCCGACGAACGTATGCCACCAAGAGGAGAATTGTCAGGACaggaAAGTAATGGAGCTGCCAGCGACATAGCCTGGAGTAGAATGCAATATGAAAGTAATTCTGCGACTTCAACATCCTATGATTTGTTGGCACGTGAAACCTGGGAAGGTTCTGACTGTTCTGATTCAGAAGTACCACCACTACAAAGTCGTGTTCCTCCAAAAGGAGAAACTTATGTAGAAGACGTTCCAACAATTATAACCATAATAGAAGCTCCATTAAATTTCAAGTGTTCAAGTTGTGGTGAAAGATTCAAATGTGTAAAAGAAAGACGCACACACCAACTTGAAGTTCATGCCGAAAAAGAAGAAAGCGATAAAAGTTCTCCAACTAAAAGCAATAATATTATTGGTtcgaaaataaacaagaaaggtgttaaaaaattggtgattaaaccAAAGACCGCCaatattaaaactgaaaataactTTGATAatgtttttactaataaaattgaAGTTAGTTTGGAAAATAATGATCAGGTGGAACCAGAAGAGAAAGTTGCGAGGGGACCTGATGGGGAAATCGACGTTAAAGAGAATATTAAATTACCCCAGTGTCGTTTATGTAATCTTCTATTTCCAGAtgcttttcaattaaaattacatagaCAAGACGTTCATagtaaaaaaagtattaatcgtTATAAATGTGATACATGTGGAGAAAATATGGCCAACGAGACGAAATTTATTGAACACTTAAGAATCCATCCCTTGGAATGTAGACTGtgtggaaaatatttttatagacgTCAAAATATTCAGCTCCACATGAAAAGGCATCTGGGGATTAAGCCCTACATGTGTGATTTTTGTGAAAAATcctttttaacaaaacaaaaattggaagAACATAAAAACACACATACGGGAGAAGCACCAATCAAGTGTACTATGTGTGATGAAACATTCAGAAGGCATTCCAATTTAGTGCAGCACAGAAACCGTCATCATttgaacattaaaaaaaaaattaaggattaTATTTGTTACTGTGGTGAAATTACACATTCTAAGAAGAAATTTGCATGGCACCAAGAGACGCACGATTTGAAGCCAAAAGCATGTACTCACTGCAACGAGAAGTTTGTGCATATGGCAAGTTTAACGAGGCACATGAGAAGGGCACATAATAAACTGTTTGTGCCTTCGGAGGAGAGGAATAATGAAAATGTCGAATGTCCGGTGTGCAAAGGAATTTATTTGCGGTCGTCATTAGAAGCGCATATTAGAAACCATAGTGGAAGTAGGCCTTTTACGTGTTTGATTTGTAATAAAGATTTCACCACAAAGTGGAACCTTAAATTACACAAATGGACACATGCCGCTCGTGCTTCTAAACCTTATAAATGTGATCAGTGTAAGGGAGCATTTATTAGGGAAAGTGATTACATAGCTCACATGAATTCGCACAAAAGTGTGAGGCCCTACACTTGTAATTATTGTGGTGCTCAGTTTATTCGAAAATATAACTGCCAGAGACATGTAAAAGAACACGAGATAGACAAAACTTACACATGCACCATTTGTAATAAAGGTTTTCATAGGTCATATTATCTTAAAGATCATATGCGTGTTCACAGCGGGATTAGGCCTTACTCGTGTCATATTTGTGGTAAAACTTCCACTACGAAATCTAATCACAACAAGCACGTGATGATACATCACGCTAAAGAGCCAGTAAGCACTGAAAATTGA
Protein Sequence: MESENTVCPVCTLYLRPGITLKSHLTSHPKQKVIDALVNLTSTVRNDAKDVAIIANQSCGETNLPIQGAPNWTQPTTGFNSIPTNHAFIYQQFMSTTSQPPPNTSTVNPVGQQYITIPTVFNPQVMCQPYVYQQQQVIMSAGTTVPSLTPLLRKPQIVDVSNEVETSTEVVSSNFGDQVNEEPKDLSKQEQEDELERKVKNYPLHKEEDIEDLDYSEEYENVASPTFSAGSDYVPDRSELNKACQTLQSPQTEMEDTNLHENGEDDCFNENADENGVEGEEDSNQEKEFDENEEYECNNLAVVQTNDQVIDMDGMQLILCNNFMGSQLISQVDDFDCLNNRPERAVLMNIGGIDGGSVIAVSDANVNIEQLVEESVSRESTNMSIRADERMPPRGELSGQESNGAASDIAWSRMQYESNSATSTSYDLLARETWEGSDCSDSEVPPLQSRVPPKGETYVEDVPTIITIIEAPLNFKCSSCGERFKCVKERRTHQLEVHAEKEESDKSSPTKSNNIIGSKINKKGVKKLVIKPKTANIKTENNFDNVFTNKIEVSLENNDQVEPEEKVARGPDGEIDVKENIKLPQCRLCNLLFPDAFQLKLHRQDVHSKKSINRYKCDTCGENMANETKFIEHLRIHPLECRLCGKYFYRRQNIQLHMKRHLGIKPYMCDFCEKSFLTKQKLEEHKNTHTGEAPIKCTMCDETFRRHSNLVQHRNRHHLNIKKKIKDYICYCGEITHSKKKFAWHQETHDLKPKACTHCNEKFVHMASLTRHMRRAHNKLFVPSEERNNENVECPVCKGIYLRSSLEAHIRNHSGSRPFTCLICNKDFTTKWNLKLHKWTHAARASKPYKCDQCKGAFIRESDYIAHMNSHKSVRPYTCNYCGAQFIRKYNCQRHVKEHEIDKTYTCTICNKGFHRSYYLKDHMRVHSGIRPYSCHICGKTSTTKSNHNKHVMIHHAKEPVSTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01292569;
90% Identity: iTF_00273041;
80% Identity: -