Basic Information

Insect: Resseliella maxima
Gene Symbol: -
Assembly: GCA_029041755.1
Location: JAQOWM010000233.1:248987-254192[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 7.5e-06 0.00071 20.4 2.4 1 23 288 310 288 310 0.98

2 18 1.2e-05 0.0011 19.9 0.1 1 23 316 338 316 338 0.97

3 18 0.00015 0.014 16.4 0.3 1 23 344 366 344 366 0.98

4 18 0.00042 0.039 15.0 3.0 3 23 374 394 372 394 0.98

5 18 0.00015 0.014 16.4 7.9 1 23 400 422 400 422 0.99

6 18 9.8e-06 0.00092 20.1 4.2 1 23 428 450 428 450 0.98

7 18 1.6e-06 0.00015 22.6 5.2 1 23 456 478 456 478 0.98

8 18 6.4e-07 6e-05 23.8 4.9 1 23 484 506 484 506 0.97

9 18 6.8e-05 0.0065 17.4 6.7 1 23 512 534 512 534 0.97

10 18 0.00081 0.077 14.1 7.1 1 23 540 562 540 562 0.98

11 18 3e-06 0.00028 21.7 3.0 1 23 568 590 568 590 0.98

12 18 3.4e-05 0.0032 18.4 7.2 1 23 598 620 598 620 0.97

13 18 5.1e-06 0.00048 21.0 3.6 1 23 626 648 626 648 0.98

14 18 2.3e-05 0.0022 18.9 7.9 1 23 654 676 654 676 0.97

15 18 3e-06 0.00028 21.7 0.4 2 21 683 702 682 703 0.95

16 18 0.00014 0.013 16.5 0.4 1 23 713 735 713 735 0.97

17 18 1.1e-05 0.0011 19.9 1.7 1 23 745 767 745 767 0.98

18 18 3.8e-05 0.0036 18.2 0.4 3 23 775 796 773 796 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	7.5e-06	0.00071	20.4	2.4	1	23	288	310	288	310	0.98
2	18	1.2e-05	0.0011	19.9	0.1	1	23	316	338	316	338	0.97
3	18	0.00015	0.014	16.4	0.3	1	23	344	366	344	366	0.98
4	18	0.00042	0.039	15.0	3.0	3	23	374	394	372	394	0.98
5	18	0.00015	0.014	16.4	7.9	1	23	400	422	400	422	0.99
6	18	9.8e-06	0.00092	20.1	4.2	1	23	428	450	428	450	0.98
7	18	1.6e-06	0.00015	22.6	5.2	1	23	456	478	456	478	0.98
8	18	6.4e-07	6e-05	23.8	4.9	1	23	484	506	484	506	0.97
9	18	6.8e-05	0.0065	17.4	6.7	1	23	512	534	512	534	0.97
10	18	0.00081	0.077	14.1	7.1	1	23	540	562	540	562	0.98
11	18	3e-06	0.00028	21.7	3.0	1	23	568	590	568	590	0.98
12	18	3.4e-05	0.0032	18.4	7.2	1	23	598	620	598	620	0.97
13	18	5.1e-06	0.00048	21.0	3.6	1	23	626	648	626	648	0.98
14	18	2.3e-05	0.0022	18.9	7.9	1	23	654	676	654	676	0.97
15	18	3e-06	0.00028	21.7	0.4	2	21	683	702	682	703	0.95
16	18	0.00014	0.013	16.5	0.4	1	23	713	735	713	735	0.97
17	18	1.1e-05	0.0011	19.9	1.7	1	23	745	767	745	767	0.98
18	18	3.8e-05	0.0036	18.2	0.4	3	23	775	796	773	796	0.97

Sequence Information

Coding Sequence: ATGGCGTCGATTCCAACATTGGGGGGACATCATTTAGTGAATCAACAACAcaatacaatgcaaaacaGTGGCGgaacatcaatttcaaatacacaacaaataCAAGAGCGTCATCCGCAAATTGGTCAACAGTCATCGGAAACTGTAAATAATGTTCGAATGGATGGAAATCCAAAAAAGCGAATGTTATCCcagcaacaacatcaaatgcaaTCTCAACCGATGCCTCATCATCAAGAGCACGCACAAATCGCACAGCATGCTGCTCAGTCAGGCCTACCAATTCCGATTCATCATCCGATTAGCCAATTATTTGCCATTGATCCACATGGTCAACAAACgattaaaactgaaaatgataataaattttatcattttccatCACATTCAATGGGAAAACCGCAAATTTTATCCGATACAAAACTTCCGCCATCGCAAATGTTTGATGTTCGCAATGCTGATGGTCAAATTGTTCATGTGAATATCGAAgatattaatcaatttttaacgTATCATGAAGTATTTGGTAAAATTGGAAATGCTGATCATGCATTTCCACCTGGTACATCAGCTGCACCATCAATTAATCCAGCCCAACCACCGGTATCAAATGCACAAACAACATCAATTCCACCAACATCAAttaatcaaacaaatacacaacaaacacaatcacaatcacaatctCAATCAACACCGTTGGTCATtccgaaaattgaaaatatcaatacaTCGGcttcatcaaattcaaatccaatATCGGTTAGTACAACATCAAATGTTTCTAATAATACATCGACAGCAACATGTGTTACAGCCGGTGGAAGTGATGATTCATCAACAATGCCATCACCTGGTATGCATACATGCGATATTTGTGGCAaagtttttgcatttaaatatcaatttatcgTTCATCGCCGTTATCATAATGAACGAAAGCCATTCATTTGCCAAGTTTGCGGTCAAGCATTCACAACATCAGCTGATCTAACATCACATGGTAAAATTCATGATGGcgttaaaatgtttatatgcAATGTGtgttttaatgtttttgcaaatgatgCCAGTCTTGAACGGCACATGAAACGACACTCCACTGATAAGCCATTTGGCTGCACAGTGTGCCAGAAGACTTTTGGAAGAAAGGAACACTTGGACAATCATTTCAGATCTCACAGCGGAGAAACACCTtttcggtGTCAATACTGTGCTAAGTGTTTTACACGTCGAGAACATATGCAGAATCATGTGCGAAAACATACTGGAGATACGCCATTCAAATGcgatatttgcaaaaaatcatttacaagGAAAGAACATTATGTGAATCATTATATGTGGCATACAGGTGAAACACCTCATACATGCAATGTTTGCGGCAAGAAATATACACGCAAAGaACATTTGGCAAATCATCAACGTTCGCATACAAATGAGAATCCATTCCGTTGCGAAATATGTGGCAAATGCTTTTCGCGCAAAGAACATTTCACTAATCACATATTGTGgcACACTGGCGAAACACCACATCGTTGTGACTTCTGTTCCAAGACATTTACTCGTAAAGAGCATTTACTAAACCATGTCAGACAACATACAAATGAATCTCCCCATCGATgCTCTTACTGCATGAAATCATTCACAAGACGAGAACATTTAGTGAACCATACACGACAGCACACAGGAGAGACTCCATTTAAATGCGAATTTTGTCCTAAAGCATTTGCACGaaaagATCATCTAAATAATCATCGAAATCAACATTTGCCAGCTGGCCAATCTCCACACAAATGTGTATATTGTAGTAAAACATTTTCGCGCAaggaacatttgaaaaatcatcaagtCAAACACACTGGAATATCTCCATATCAgtgTAAATTCTGCAACAAGATATTTTCACGACGTGAACATTTGAACAACCATGAAATGATACATACtgGTCAATCTCCCCATAAATGTGTTTATTGCGACAAGGCATTTACACGCAAAGAGCATTtgaacaatcatttaaagcaTCATTCACCGGATAATCCGCTAATTTGTACGGTATGCAATAAATCATTTAGTCGAAAGGAATCCCTTGTAAATCATATGAGGTTTGTtCGATGCCATACCGGTGAACGTCCATATGCATGTGAAACATGTGGAAAATCATTTCCATTAAAAGGAAATTTACTATTCCATCAACGTAGCCATAATAAAGGTGTAAAAGCTGAACGGCCATTCCGTTGTGATCTCTGTCCAAAGGATTTCATATCAAAAGGTCATTTAGTTTCACATCGTCGATCACATACCGGTGAAAAGCCATTCGGTTGCAGTCAATGTGGTAAAGCGTTTATTGGAAAAGGGAATCTATTGCGTCATGTTAAGAAAACACATCCGAATATAACAGATGTTCAAAGCATTATGATGCAAGCTAAAGCAAAAGCGAAACTAGCTGCCAATTCGGCTATAGCAACGATTGGAAAtcaaacaacatcaacaacatcgATCCCATCATCGGTGCCGCCTGTTGTAACATCAACAATTACAACTCAACCAATGCACAGCGGCCCATCGGCCATACATTCGGGCAGTATACAAACGGTTGCACCATCAAATCCACAACAATCTCAACCACCACCACATAATATTGTTGCTCCACATATTCCAATTCTAATGGATCCATTGGTTCAGAGCAACTACTTAATTAGCATctaa
Protein Sequence: MASIPTLGGHHLVNQQHNTMQNSGGTSISNTQQIQERHPQIGQQSSETVNNVRMDGNPKKRMLSQQQHQMQSQPMPHHQEHAQIAQHAAQSGLPIPIHHPISQLFAIDPHGQQTIKTENDNKFYHFPSHSMGKPQILSDTKLPPSQMFDVRNADGQIVHVNIEDINQFLTYHEVFGKIGNADHAFPPGTSAAPSINPAQPPVSNAQTTSIPPTSINQTNTQQTQSQSQSQSTPLVIPKIENINTSASSNSNPISVSTTSNVSNNTSTATCVTAGGSDDSSTMPSPGMHTCDICGKVFAFKYQFIVHRRYHNERKPFICQVCGQAFTTSADLTSHGKIHDGVKMFICNVCFNVFANDASLERHMKRHSTDKPFGCTVCQKTFGRKEHLDNHFRSHSGETPFRCQYCAKCFTRREHMQNHVRKHTGDTPFKCDICKKSFTRKEHYVNHYMWHTGETPHTCNVCGKKYTRKEHLANHQRSHTNENPFRCEICGKCFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTNESPHRCSYCMKSFTRREHLVNHTRQHTGETPFKCEFCPKAFARKDHLNNHRNQHLPAGQSPHKCVYCSKTFSRKEHLKNHQVKHTGISPYQCKFCNKIFSRREHLNNHEMIHTGQSPHKCVYCDKAFTRKEHLNNHLKHHSPDNPLICTVCNKSFSRKESLVNHMRFVRCHTGERPYACETCGKSFPLKGNLLFHQRSHNKGVKAERPFRCDLCPKDFISKGHLVSHRRSHTGEKPFGCSQCGKAFIGKGNLLRHVKKTHPNITDVQSIMMQAKAKAKLAANSAIATIGNQTTSTTSIPSSVPPVVTSTITTQPMHSGPSAIHSGSIQTVAPSNPQQSQPPPHNIVAPHIPILMDPLVQSNYLISI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00367442; iTF_00133583; iTF_01350969;
90% Identity: iTF_01350969;
80% Identity: -