Basic Information

Gene Symbol
kn
Assembly
GCA_029041755.1
Location
JAQOWM010000455.1:386233-421923[+]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.9e-223 2.5e-219 730.0 0.0 12 385 89 474 79 479 0.96
2 2 2.7e-08 0.00036 19.6 14.7 425 528 480 585 472 600 0.64

Sequence Information

Coding Sequence
ATGGCACTCGACTTGCAGATACCAAAGCGGATTAAATCTGCGGCTCATTTGATAGTTAATTGTAACATGGTTGATAACGGCTTAAAGCTGCGTTCTGACGAACCAGTACCGGGCTGTTTTAGCTCGGCGTCACCATGGCCAACACTCGAATTGGAATGGGGACGAAAATTGTATCCATCATCGGGCCGTGGGCCCAGCAGCAGTCTAATGTTCAGTTTACCGCCAGGTAGTGACTTAAATCAAAATCGTGGCCCGATCACATCACTTAAAGAAGAACCACTCGGTACACGAGCATGGATGCAACCAACACAACaaataaatCTCGGCATTGGCCGTGCGCATTTCGAAAAACAGCCGCCCAGTAATCTACGAAAGTCAAACTTTTTCCACTTTGTGATTGCACTGTATGATCGAAGCGAGCAACCAATCGAAATAGAACGTACTGCCTTTATTGGATTTATAGAAAAAGATCAgGAAACTGACagtacaaaaacaaataatggcATTCAGTATCGGCTACAGTTACTCTATGCGAACGgTGCCAGACAGGAGCAGGATATATTTGTTCGGTTGATTGATTCACAAACAAAACAGGCCATTATTTACGAAGGACAAGACAAAAATCCGGAAATGTGTAGAGTTTTATTAACTCATGAAGTGATGTGCAGTCGATGCTGCGACAAGAAAAGCTGCGGAAACCGTAACGAAACGCCGTCAGATCCAGTGATTATAGATAGGTTTTTCCTCAAATTCTTCttaaaatgtaatcaaaattgtttgaaaaatgctgGAAATCCACGAGATATGAGAAGATTTCAAGTGGTGATTGCAACACAAGTCTCAGTTGAAGGTCCATTGATGGCAATATCCGATCAAATGTTTGTACACAACAATTCAAAGCATGGACGACGAGCCAAACGATTGGATGCTGGCGATGGTACATCACCGTTATCAATTTCACATCCATTGGCTCCAGACAGTACGTACGATGGTCTTTACCCACCGATGCCGGTTGCAACACCTTGTATAAAAGCAATATCACCGACTGAAGGTTGGACTATAGGCGGTGCACAAGTTATCATTATTggtgataatttttttgatggCTTACAAGTTGTTTTTGGAACAATGCTTGTATGGAGTGAGCTGATAACATCACATGCGATTCGAGTTCAAACACCACCAAGACATATTCCTGGTGTGGTTGATGTTACTCTATCGTACAAAAGTAAGCAGTTTTGTAAAGGTCAGCCAGGACGTTTTGTATATGTTTctTTAAGTGAACCGACACTTGATTACAATTTCCAACGATTACAAAAATCAGTACCGAGACATCCAGGCGATCCAGaTAAACTTCCGAAAGAAATTTTACTAAAACGAGCAGCCGACATTGCTGAAACACTTTATTCGATGCAAAGGTCACCAAACAGTTCGACTACATTTAATTCGTATGCCGGTCAATTGGCCGTTAGTGTTCAAGACAGCAATGCCCAGTGGACTGAAGATGATTATCAACGGACACAGACAAGTAGTGTTAGCCCGCGTGGTGGCTATTGTAGTAGTGCATCAACGCCTCATTCATCTGGTGGCGGTTCATATGGTGCTGGCAATGGAAATGGTTATGCTCCAAATATGGGAACCTTAACAGCGTCCTCATCGAGTGTGTTCAATTCAACATCAACTAGTGCCTTTGCACCATTAGTAACCACATCATCAGCTTGGCATCAAGCCTTAGTCCCTGTTCACACATCTTCACACCAAACCTGGCATAATCCTTCTGCAACAACAGCCACAGctgtttaa
Protein Sequence
MALDLQIPKRIKSAAHLIVNCNMVDNGLKLRSDEPVPGCFSSASPWPTLELEWGRKLYPSSGRGPSSSLMFSLPPGSDLNQNRGPITSLKEEPLGTRAWMQPTQQINLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRSEQPIEIERTAFIGFIEKDQETDSTKTNNGIQYRLQLLYANGARQEQDIFVRLIDSQTKQAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVIATQVSVEGPLMAISDQMFVHNNSKHGRRAKRLDAGDGTSPLSISHPLAPDSTYDGLYPPMPVATPCIKAISPTEGWTIGGAQVIIIGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVDVTLSYKSKQFCKGQPGRFVYVSLSEPTLDYNFQRLQKSVPRHPGDPDKLPKEILLKRAADIAETLYSMQRSPNSSTTFNSYAGQLAVSVQDSNAQWTEDDYQRTQTSSVSPRGGYCSSASTPHSSGGGSYGAGNGNGYAPNMGTLTASSSSVFNSTSTSAFAPLVTTSSAWHQALVPVHTSSHQTWHNPSATTATAV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00956829;
90% Identity
iTF_00367011;
80% Identity
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