Cnas005323.1
Basic Information
- Insect
- Contarinia nasturtii
- Gene Symbol
- kn
- Assembly
- GCA_009176525.2
- Location
- NW:9533188-9565713[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.8e-226 3.9e-222 738.3 0.0 10 385 18 405 9 410 0.97 2 2 1.8e-08 0.00025 19.1 14.0 426 515 412 504 405 530 0.67
Sequence Information
- Coding Sequence
- ATGTTCAGTTTACCACCAGGTAGTGACTTAAACCAAAATCGGGGCACGATCACATCACTTAAAGAAGAACCACTTGGCACCAGATCGTGGATGCAACCAACACAACAAATCAATCTTGGTATTGGTCGTGCACATTTTGAGAAACAGCCTCCAAGTAATCTGCGAAAATCAAACTTTTTCCACTTTGTGATTGCACTGTATGATCGAAGCGAGCAACCAATCGAAATCGAACGTACTGCCTTCATTGGATTCATAGAAAAGGATCAGGAAACTGACAGTACAAAGACAAACAATGGCATTCAGTATCGGTTACAGTTACTCTATGCGAATGGTGCTAGGCAGGAACAGGATATATTCGTACGGCTAATAGACTCACAAACGAAACAGGCCATTATTTACGAAGGACAAGACAAAAATCCAGAAATGTGTAGAGTTTTACTAACTCATGAAGTCATGTGCAGTCGATGTTGTGACAAGAAAAGCTGCGGAAACCGAAACGAAACGCCGTCAGATCCAGTGATTATAGATAgattttttcttaaattcttcttaaaatgtaatcaaaattgtttgaaaaatgctgGAAACCCACGAGACATGCGAAGATTTCAAGTAGTGATTGCAACGCAGGTTTCGGTTGAAGGTCCACTGATGGCTATATCTGACCAAATGTTCGTGCACAATAATTCAAAGCACGGAAGACGAGCCAAGCGATTGGACGCTAGTGATGGTACATCACCGTTATCAATTTCACATCCATTGGCTCCAGACAGTACGTACGATGGTCTCTATCCACCGATGCCTGTTGCAACACCATGTATAAAAGCAATATCACCAACTGAAGGATGGACCATTGGTGGTGCACAAGTTATTATTGTTggcgataatttttttgatggcCTTCAAGTTGTGTTTGGTACGATGCTCGTATGGAGTGAGTTGATAACATCGCATGCAATTCGAGTTCAAACACCACCACGGCACATTCCTGGCGTGGTTGATGTTACTCTATCCTATAAAAGTAAGCAGTTTTGTAAAGGTCAGCCAGGCCGtttcgtgtatgtgtCTTTAAGTGAACCAACACTTGATTACAACTTTCAACGATTACAAAAATCAGTGCCGCGACATCCAGGCGATCCCGATAAGCTACCAAAGGAAATTCTGCTTAAACGAGCAGCTGATATAGCTGAAGCTCTTTATTCGATGCCAAGATCACCAAACAGTTCGAGTACATTCAATTCGTACGCCGGTCAATTGGCAGTAAGTGTTCAAGACAGTAACGCACAATGGACTGAAGATGACTACCAACGAACACAGACCAGTAGTGTAAGTCCACGCGGTGGCTACTGCAGTAGTGCATCAACACCACATTCATCCGGAGGTGGTTCGTATGGTGCTGGCAATGGAAATGGCTATGCACCAAATATGGGCACATTATCAGCGTCTACATCGAGTGTGTTTAATTCTACATCAACTAGTGCCTTTGCACCATTAGTAACCACATCATCAGCTTGGCATCAAGCTTTAGTCCCTGTTCACACATCAACACACCAAACCTGGCATAATCCTTCTGCTACAACAGCCACAGCTGTTTAA
- Protein Sequence
- MFSLPPGSDLNQNRGTITSLKEEPLGTRSWMQPTQQINLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRSEQPIEIERTAFIGFIEKDQETDSTKTNNGIQYRLQLLYANGARQEQDIFVRLIDSQTKQAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVIATQVSVEGPLMAISDQMFVHNNSKHGRRAKRLDASDGTSPLSISHPLAPDSTYDGLYPPMPVATPCIKAISPTEGWTIGGAQVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVDVTLSYKSKQFCKGQPGRFVYVSLSEPTLDYNFQRLQKSVPRHPGDPDKLPKEILLKRAADIAEALYSMPRSPNSSSTFNSYAGQLAVSVQDSNAQWTEDDYQRTQTSSVSPRGGYCSSASTPHSSGGGSYGAGNGNGYAPNMGTLSASTSSVFNSTSTSAFAPLVTTSSAWHQALVPVHTSTHQTWHNPSATTATAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00956829;
- 90% Identity
- iTF_01287900;
- 80% Identity
- -