Mdes015842.1
Basic Information
- Insect
- Mayetiola destructor
- Gene Symbol
- kn
- Assembly
- None
- Location
- GL501515.1:374103-400535[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.3e-28 7.4e-24 84.3 0.0 10 94 90 161 81 162 0.85 2 3 3.6e-170 8e-166 553.1 0.0 133 385 160 436 159 441 0.98 3 3 1.9e-06 0.042 12.5 12.3 425 505 442 524 436 552 0.71
Sequence Information
- Coding Sequence
- ATGATAAATATGATAAATATGAGGGATGACTCTGACTACGTTCATAAACAAATCGGCAACATTTATTTTTGTGATCAAGTGTTCGATAACGGCTTAAAGCTGCGTTCCGACGAACCAGTTCCGAGCTGTTTCAGCTCGGCATCACCATGGCCTACATTAGATTTAGAATGGGGTCGAAAATTGTATCCATCATCCGGACCGCGTAGTAGCAGTTTGATGTTTAGTTTACCACCGGGCAGTGATCTCAATCAAAATCGAGGTGCAATAACGTCTTTGAAAGAAGAGCCGCTTGGTACGAGAGCATGGATGCAACCAACACAACAGCTTAACCTTGGTATTGGGCGAGCCCACTTCGAGAAGCAACCACCCAGTAATCTACGAAAATCGAATTTCTTTCATTTCGTGATTGCACTATATGATCGAACCGAACAACCCATCGAGATTGAACGAACTGCCTTCATTGGATTCATTGAAAAAGATCAGGCTATAATCTATGAAGGCCAAGACAAAAATCCAGAAATGTGTCGGGTTCTGTTAACTCACGAAGTAATGTGCAGCCGCTGTTGTGACAAAAAAAGTTGTGGAAACCGTAATGAGACACCATCAGATCCTGTTATCATTGATAGATTTTTTCTAAAGTTCTTTTTAAAATGCAACCAGAACTGTTTAAAAAATGCAGGAAATCCACGAGATATGCGGCGATTCCAAGTGGTAATTGCAACACAGGTATCTGTTGATGGCCCACTAATGGCGATATCAGATCAAATGTTTGTCCATAATAATTCAAAGCATGGACGAAGAGCGAAACGACTGGATGCCAATGATGGAACTGGAACATCACCATTATCACTTTCTCATCCATTAGCTCCAGATAGTATGTATCCGCCAATTCCAGTTGCTACACCGTGTATAAAGGCTGTTTCACCTAGTGAAGGATGGACAATGGGTGGTACCCAAGTCATTATAATTGGTGATAACTTTTTTGATGGATTACAAGTCGTATTTGGAACGATGCTTGTTTGGAGTGAGTTGATAACATCGCATGCAATACGAGTTCAAACACCACCAAGACACATACCCGGAGTTGTAGAAGTTACTTTATCATATAAAAGTAAACAATTTTGTAAAGGTCAGCCCGGCCGCTTTGTATACGTTTCTTTGTGTGAACCAACATTAGATTATAATTTCCAAAGATTACAAAAGTTTTCGGTGTTACGTCATCCGGGCGATCCAGAAAAATTACCGAAAGAGATTTTATTGAAACGTGCTGCTGATATGGTTGAGGCTTTGTACAATCGTCCAAGATCACCAAACAGTTCAACCACATTCAATTCGTATGCAACGCAGCTTGCAGTCAGTGTTCAAGATGGAAATGCACAATGGACAGATGACGAATATCAGCGAGGTCAAAGTAGCAGCGTTAGTCCTCGTGGCGGCTACTGTAGCAGTGCATCCACACCACACTCGTCGGGCGGTTCATATGGAGCTGGAAATGGTAATACATATGCACCAAATATGGGCGCATTGTCATCTTCGTCGGTCAGTGTATTCAATTCAACATCAAGAGTTAGTGGACTTGTGGGCAGTTTCAATCCATTTTCTTTGCCGACATGCAATTCACAAGGATATCCGGCGAGTCCGTTGGTATCATCGTCTAAATAA
- Protein Sequence
- MINMINMRDDSDYVHKQIGNIYFCDQVFDNGLKLRSDEPVPSCFSSASPWPTLDLEWGRKLYPSSGPRSSSLMFSLPPGSDLNQNRGAITSLKEEPLGTRAWMQPTQQLNLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRTEQPIEIERTAFIGFIEKDQAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVIATQVSVDGPLMAISDQMFVHNNSKHGRRAKRLDANDGTGTSPLSLSHPLAPDSMYPPIPVATPCIKAVSPSEGWTMGGTQVIIIGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGQPGRFVYVSLCEPTLDYNFQRLQKFSVLRHPGDPEKLPKEILLKRAADMVEALYNRPRSPNSSTTFNSYATQLAVSVQDGNAQWTDDEYQRGQSSSVSPRGGYCSSASTPHSSGGSYGAGNGNTYAPNMGALSSSSVSVFNSTSRVSGLVGSFNPFSLPTCNSQGYPASPLVSSSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00367011; iTF_01287900;
- 90% Identity
- -
- 80% Identity
- -