Pumb024426.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pyrrhia umbra
Gene Symbol
nfxl1
Assembly
GCA_963891755.1
Location
OY982939.1:10364188-10366659[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 3 3.3e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 17 0.022 2.4e+02 2.7 0.7 4 10 169 175 168 175 0.97
3 17 4.7e-07 0.0052 17.6 15.5 3 19 186 202 185 202 0.95
4 17 2.1 2.3e+04 -3.6 1.1 6 10 227 231 226 232 0.51
5 17 3.4e-07 0.0037 18.1 10.6 3 19 239 255 237 255 0.91
6 17 2.5 2.8e+04 -3.9 1.9 6 10 280 284 279 284 0.83
7 17 1.1e-09 1.2e-05 26.1 11.7 1 19 290 308 290 308 0.98
8 17 2.3e-05 0.25 12.3 18.9 3 19 345 361 337 361 0.86
9 17 0.0001 1.1 10.2 20.3 1 18 395 412 395 413 0.97
10 17 6.7e-10 7.3e-06 26.7 14.0 1 19 422 440 422 440 0.99
11 17 0.00031 3.4 8.6 6.4 9 19 488 498 486 498 0.89
12 17 0.0065 71 4.4 6.9 1 12 508 518 508 518 0.90
13 17 0.52 5.7e+03 -1.7 3.6 14 18 547 551 547 552 0.87
14 17 0.32 3.6e+03 -1.0 0.1 8 12 568 572 567 573 0.82
15 17 9.3e-06 0.1 13.5 5.2 1 11 588 598 588 599 0.97
16 17 0.00014 1.5 9.8 12.8 4 18 630 645 628 646 0.86
17 17 5e-06 0.055 14.4 13.9 1 18 687 705 687 706 0.90

Sequence Information

Coding Sequence
ATGGCGCGTAGGTACCGCGATGCCGCTGCAAAATTGCAGCAAAATGTTCAAAAGCACTTAAAAGAAATGAAGGAATTGTCGTCGTCGGAAGATGAGGATCCTTGCGAGTCCAGCGTCCTAGAAGGCGTGTTCCAGAGTTACTGGCGTGGTGGCGGCGACACTCATTTGCTGAATAGGACAAAGAATCTTCTAGAAGAAGCCATTAGCGGCCGCGTAGTTACTTGTCTCATATGCATAGGCTCGATTAAAAAGACTCACGCTATTTGGACATGCGATCATTGTTATTCCTACTTCCATCTATCTTGTATACAAAAGTGGTCAAATGACAGCATCAGCTTACGCAGTGAAGAATCCCAAGGCCCAATAGCTGTAATAAAACATCAGAAAATTGAATGGTGCTGCCCTAAGTGCCGGTATTCTTATTCTAAAGAAGAAATACCACGTAAATACCGGTGTTTTTGCGGTAAAACTGACAACCCGCCAAGCCATCCTTGGCTTATACCTCACACTTGCGGAGAAGTCTGTGAGAAAAGACTGTCAACAGGTGAGAATTGTAAACATAGATGCTTGCTCTTATGCCACCCTGGTCCTTGTCCCCCGTGCCCGCAGACTGTGAATGGGACGTGTTATTGTCAGAAGGAACATAAGAGAGTGAGATGCAGTGCTGACAAATGGTCCTGTGGTCAGCCGTGTAAGAAAACTCTTTTGTGTAAGActcataaatgtgaaaatgtatGTCATGCGGGTGATTGTGCCCAGTGCAGTTACACAAGTACTCAGCCATGCCAGTGTGGCACCGAGAAAGCTAAGAGACCCTGCAATGATCTATTCTGGCAGTGTAAGAAGCCttgtaacaaattattttcatgCGGCTATCACAAATGCGAGAGAGTCTGTCATTCAGGTGACTGTGGGCTCTGTCCAAATTCAGGGCTGCTATCATGTCCTTGTGGTGCTAACAAACGTTTTGTTCAATGTCCGGATGTTATGGAAACATGCTTAGGTACATGTGGGAAAAAGCATGAAGATTGTGAACACAGCTGTCCAGAAAAATGTCACAATGGCAACTGTCCACCTTGCCAAGTTTTAGTGTCAAAAGAATGCCAATGCTCTACCCATACCAGGTCCCTACCATGCAGCAAAGACTTCAAATGTGATACTAAATGTAGAGGAATAAGATCTTGCGGCAAACACGGTTGTGGAAGAAAATGCTGTAATGGAAACTGCCCTCCGTGTGAGAAAACATGTGATAAAGGACTCCAATGTGGCAGGCATAAGTGCACTAACATCTGCCATCGTGGACCGTGTTATCCGTGCCCATTAGAATCCAAAGTAACATGCAGATGCAAAGAAACCTATGTACGAGTTCCTTGTGGACGAGAGCGGCAGACAAAACCTCCAAAATGCAACCTAccatgtaaaattaaatacaagtgTGGTCATAGTGAGGAGAATAAACACTCTTGCCACTTTGGTGACTGTCCGCCATGCAAGGCAATTTGTTATAAACAATATCCAAAATGTAGTCACCAGTGTAAGGCAGTGTGCCATGAATACGTAGCAGTGTTGTTCAAACAAGTCGAAAAACCTGCTACTCCATGGGAGGTGCAACCACCAAAGACTAAGATAATGACCTTAGATTGTCCGCCATGTGATACTCCTGTACCTATAATTTGCTTTGGGGAACATGAGACAGACAGCCAGCCATGCCATTCAGCTACACGGAGACCATGTGGTAGAGAGTGTGGAAAACCTTTAGCTTGTGGAAATCACAAGTGCAATTTACTTTGTCACTTATACAGCCCTGTTCCTGAGTACCCTAATGTGCCTTCCAGTTGCAGGCAATGCAATAGAGAGTGTTCAGTTCCTCGTCCTGAGAAGTGTGCGCATAAATGTTCCATCCGAGCCTGCCATCCAGGTCCTTGCCGCCCCTGTGAGATACTAGAACGTGTAGCCTGCCACTGTGGCGTAACAGAGATATACCTGCGCTGCCGAGAATTATCCGCAGCTACTGAGGAGATGCTGTCCTGCAAACAGCAGTGTCCAAAGAACTTAGAATGTGGGCACCGCTGCCGTAATACTTGCCATTCAGGACCTTGTGGCAAGCAGGTGTGCACTAAGAAAACTAAAGTGCATTGTCCATGTGGTAATATAAAGAAGGAAGCTCCTTGCAACTCAGTCAGAAACGGTGACACAAAGATACTGTGTGACCAAACATGTGAAGCTAAAAAGATTGCTGCTAAAATAGAgcaagaaaaagaaaaacagaGATTAAAGGACTTAGAAGAAGAAAAGAATCGTAAAGAGTTAGCTGAGTATGAGTGGAAATTAAGcggtaagaagaaaaaatataaggaAAAGAAAATGGTTGTTGGTAAGGACGACAGAGGTTTCTTGAAGAGATATTGGGTACCCGTATCATCATTCCTATTTATGATGCTAGctgctatatattatatattttatgtataa
Protein Sequence
MARRYRDAAAKLQQNVQKHLKEMKELSSSEDEDPCESSVLEGVFQSYWRGGGDTHLLNRTKNLLEEAISGRVVTCLICIGSIKKTHAIWTCDHCYSYFHLSCIQKWSNDSISLRSEESQGPIAVIKHQKIEWCCPKCRYSYSKEEIPRKYRCFCGKTDNPPSHPWLIPHTCGEVCEKRLSTGENCKHRCLLLCHPGPCPPCPQTVNGTCYCQKEHKRVRCSADKWSCGQPCKKTLLCKTHKCENVCHAGDCAQCSYTSTQPCQCGTEKAKRPCNDLFWQCKKPCNKLFSCGYHKCERVCHSGDCGLCPNSGLLSCPCGANKRFVQCPDVMETCLGTCGKKHEDCEHSCPEKCHNGNCPPCQVLVSKECQCSTHTRSLPCSKDFKCDTKCRGIRSCGKHGCGRKCCNGNCPPCEKTCDKGLQCGRHKCTNICHRGPCYPCPLESKVTCRCKETYVRVPCGRERQTKPPKCNLPCKIKYKCGHSEENKHSCHFGDCPPCKAICYKQYPKCSHQCKAVCHEYVAVLFKQVEKPATPWEVQPPKTKIMTLDCPPCDTPVPIICFGEHETDSQPCHSATRRPCGRECGKPLACGNHKCNLLCHLYSPVPEYPNVPSSCRQCNRECSVPRPEKCAHKCSIRACHPGPCRPCEILERVACHCGVTEIYLRCRELSAATEEMLSCKQQCPKNLECGHRCRNTCHSGPCGKQVCTKKTKVHCPCGNIKKEAPCNSVRNGDTKILCDQTCEAKKIAAKIEQEKEKQRLKDLEEEKNRKELAEYEWKLSGKKKKYKEKKMVVGKDDRGFLKRYWVPVSSFLFMMLAAIYYIFYV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00932106;
90% Identity
iTF_00784075; iTF_00784882; iTF_00786452; iTF_00785705;
80% Identity
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