Hass008430.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Helicoverpa assulta
Gene Symbol
nfxl1
Assembly
GCA_029618815.1
Location
CAWLCW010000009.1:1244714-1247185[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 2 3.3e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 18 0.014 2.3e+02 2.7 0.7 4 10 169 175 168 175 0.97
3 18 3.1e-07 0.0051 17.6 15.5 3 19 186 202 185 202 0.95
4 18 2 3.3e+04 -5.5 1.2 6 10 227 231 227 231 0.69
5 18 1.8e-07 0.003 18.4 10.0 3 19 239 255 237 255 0.91
6 18 1.7 2.7e+04 -3.9 1.9 6 10 280 284 279 284 0.83
7 18 3.5e-10 5.8e-06 27.1 11.5 1 19 290 308 290 308 0.99
8 18 2.1e-05 0.34 11.8 19.4 3 19 345 361 337 361 0.86
9 18 6.7e-05 1.1 10.2 20.3 1 18 395 412 395 413 0.97
10 18 4.5e-10 7.3e-06 26.7 14.0 1 19 422 440 422 440 0.99
11 18 7.7e-05 1.3 10.0 5.1 9 19 488 498 484 498 0.91
12 18 0.00064 10 7.1 8.3 1 12 508 518 508 518 0.96
13 18 0.35 5.6e+03 -1.7 3.6 14 18 547 551 547 552 0.87
14 18 0.22 3.6e+03 -1.1 0.2 8 12 568 572 567 572 0.79
15 18 9.1e-06 0.15 13.0 5.3 1 11 588 598 588 599 0.97
16 18 0.73 1.2e+04 -2.7 1.4 15 18 613 616 612 617 0.82
17 18 9.7e-05 1.6 9.7 12.8 4 18 630 645 628 646 0.86
18 18 6.1e-06 0.099 13.5 13.2 1 18 687 705 687 706 0.89

Sequence Information

Coding Sequence
ATGGCTCGAAGATACAAAGACGCCGCTGCAAAATTGCAGCAAAATGTTCAGAAACACTTAAACCAAATGAAGGAACTCTCGTCTTCGGAGGATGAGGAGCCTTGCGAGTCCAGCGTTCTAGAAGGCGTGTTCCAGAGCTACTGGCGTGGAGGCGGCGACACTCACATGCTGAACAGGACCAAGAACCTTCTCGAAGAAGCCATCAGCGGCCGCGCAGTGACTTGTCTCATATGCATAGGTTCCATTAAAAAAACTCACGCGATCTGGACTTGTGACCATTGCTTCTCCTATTTCCATCTATCTTGTATACAAAAGTGGTCAAATGACAGCATTAGCTTACGCAGTGAAGAGTCTCACGGCCCTATTGctgtaataaaacaacagaaaattGAATGGTGCTGCCCTAAGTGCCGGAATTCGTATTCCAAAGAAGAAATTCCACGGAAGTACCGTTGTTTCTGCGGTAAAACTGATAATCCGCAAAACCACCCTTGGCTTATACCTCATACTTGCGGAGAGGTCTGTGAAAAAAGGCTGTCTGCTGGTGATAATTGTAAACATAGATGTTTGCTGTTATGTCACCCTGGTCCATGTCCGCCGTGCCCACAAACTGTGAATGGAACATGTTTTTGTCAAAAGGAACACAAGAGAGTGAGGTGTAGTGCTGAAAAATGGTCCTGTGGTCAGCTGTGTAAGAAAACCCTTTTGTGTAAGACTCATAAATGTGAAAATGTGTGTCATGCAGGTGATTGTGATGACTGCAGCTACACAAGCATACAGTCATGCCAGTGTGGCAATGAGAAAGCTAAAAGACCATGTAATGATCCATTCTGGCAGTGCAAGAAAccttgtaataaattattttcttgtggATATCATAAATGTGAGAGAGTTTGTCATTCAGGTGACTGTGGGATGTGTCCAAACTCAGGAATGTTATCATGTCCGTGCGGGGCCAACAAGAGATTTGTTCAATGTCCTGATGTTATGGAGACATGCTTAGGTACTTGTGGGAAAAAGCATGATGGATGTGAGCACAGCTGCCCAGAAAAGTGTCACAATGGCAACTGTCCACCTTGCCAAGTCCTGGTATCTAAAGAGTGCCACTGTGCAACCCACACAAGGTCACTGCCATGTAGCAAAGATTATAAATGTGACACCAAGTGCAGAGGCATAAGATCATGTGGTAAACATGGTTGTGGAAGAAAGTGCTGTAATGGGAACTGCCCTCCATGTGAGAAAACTTGTGATAAAGGACTGCAGTGCGGTAGGCACAAATGCACCAACATCTGTCACCGTGGCCCATGTTACCCATGCCCCCTGGAATCTAAAGTAACTTGCAGATGCAAAGAAACCTATGTAAGAGTCCCATGTGGACGGGAACGCCAGACAAAACCTCCAAAATGTCACTTACCATGCAAAATTAAATACAAGTGTGGTCATAGTGCAGAAAATAAACATTCTTGCCACTTTGGTGACTGTCCACCATGTAAGGCAATTTGTCAAAAGCAGTATGCAAAATGTGGTCATCAGTGTAAGTCAGTGTGTCATGAATATGTTGCAGTATTGTTCAAACAAGTCGAAAAACCTGCAACTCCATGGGAAGTACAACCTCCAAAGACGAAGATTATGACCTTAGATTGTCCACCATGTGATACTCCTGTACCTATGGTTTGTTTCGGAGAACATGAAACCGATAACCAGCCTTGCCATTCAGCAATACGGCGGCCATGTGGAAGAGAGTGTGGAAAACCACTGGCCTGTGGAAACCACAAGTGTACTTTACTTTGTCATTTATATAGCCCTGTTCCTGAGTATGCCAATGTGCCTTCCAGTTGCAGACCATGCAATAGAGAGTGCTCTGTTCCTCGTCCTGAGAAGTGTGCCCATAAGTGTTCTATGCGGGCATGCCATCCAGGCCCATGCCGTCCATGTGAGATACTTGAGCGTTTAGCTTGCCACTGTGGAGTAACAGAGATATACCTCCGTTGCCGAGAATTATCTGAAGCTACTGAGGAGAAGCTGTCATGCAAGCAACAATGTCCAAAGAACTTAGAATGTGGTCACCGTTGCCGTAATTCTTGCCATTCAGGACCTTGTGGCAACCAGGTGTGCACTAAGAAAACCAAAGTCCATTGCCCATGTGGTAATATAAAAAAGGAAGCCCCTTGCAACACAGTCAGAAGCAGAGAAACTAAGATACTCTGCGATCAAACCTGTGAAGCTAAGAAGATAGCTGCTAAAATAGAgcaagaaaaagaaaaacagaGATTAAAAGAATTAGAGGAAGAAAAGAATCGTAAAGAGTTAGCAGAATATGAGTGGAAACTAAGTGgcaagaagaaaaaatataaggaGAAGAAGATGGTTGTTGATAAAGATGATAGGAGTTTCCTGAAGAGATATTGGGTACCCATATCATCATTCCTATTTATGATGCTAGCCtcagtatattatattttttatgtctaa
Protein Sequence
MARRYKDAAAKLQQNVQKHLNQMKELSSSEDEEPCESSVLEGVFQSYWRGGGDTHMLNRTKNLLEEAISGRAVTCLICIGSIKKTHAIWTCDHCFSYFHLSCIQKWSNDSISLRSEESHGPIAVIKQQKIEWCCPKCRNSYSKEEIPRKYRCFCGKTDNPQNHPWLIPHTCGEVCEKRLSAGDNCKHRCLLLCHPGPCPPCPQTVNGTCFCQKEHKRVRCSAEKWSCGQLCKKTLLCKTHKCENVCHAGDCDDCSYTSIQSCQCGNEKAKRPCNDPFWQCKKPCNKLFSCGYHKCERVCHSGDCGMCPNSGMLSCPCGANKRFVQCPDVMETCLGTCGKKHDGCEHSCPEKCHNGNCPPCQVLVSKECHCATHTRSLPCSKDYKCDTKCRGIRSCGKHGCGRKCCNGNCPPCEKTCDKGLQCGRHKCTNICHRGPCYPCPLESKVTCRCKETYVRVPCGRERQTKPPKCHLPCKIKYKCGHSAENKHSCHFGDCPPCKAICQKQYAKCGHQCKSVCHEYVAVLFKQVEKPATPWEVQPPKTKIMTLDCPPCDTPVPMVCFGEHETDNQPCHSAIRRPCGRECGKPLACGNHKCTLLCHLYSPVPEYANVPSSCRPCNRECSVPRPEKCAHKCSMRACHPGPCRPCEILERLACHCGVTEIYLRCRELSEATEEKLSCKQQCPKNLECGHRCRNSCHSGPCGNQVCTKKTKVHCPCGNIKKEAPCNTVRSRETKILCDQTCEAKKIAAKIEQEKEKQRLKELEEEKNRKELAEYEWKLSGKKKKYKEKKMVVDKDDRSFLKRYWVPISSFLFMMLASVYYIFYV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00932106;
90% Identity
iTF_01286103;
80% Identity
-