Hvir003790.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Heliothis virescens
Gene Symbol
nfxl1
Assembly
GCA_002382865.1
Location
NWSH01003888.1:5382-10267[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 2 1.5e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 18 0.014 1.1e+02 2.7 0.7 4 10 169 175 168 175 0.97
3 18 3.1e-07 0.0023 17.6 15.5 3 19 186 202 185 202 0.95
4 18 1.4 1.1e+04 -3.6 1.1 6 10 227 231 226 232 0.51
5 18 2.7e-07 0.002 17.8 9.7 3 19 239 255 237 255 0.91
6 18 4.9e-10 3.7e-06 26.6 11.9 1 19 290 308 290 308 0.99
7 18 1.3e-05 0.1 12.4 18.8 3 19 345 361 337 361 0.86
8 18 6.7e-05 0.5 10.2 20.3 1 18 395 412 395 413 0.97
9 18 4.5e-10 3.3e-06 26.7 14.0 1 19 422 440 422 440 0.99
10 18 0.0002 1.5 8.6 6.4 9 19 488 498 486 498 0.89
11 18 0.00058 4.3 7.2 7.7 1 12 508 518 508 518 0.96
12 18 0.35 2.6e+03 -1.7 3.6 14 18 547 551 547 552 0.87
13 18 0.22 1.6e+03 -1.0 0.1 8 12 568 572 567 573 0.82
14 18 5.3e-06 0.04 13.7 4.8 1 11 588 598 588 599 0.97
15 18 0.73 5.4e+03 -2.7 1.4 15 18 613 616 612 617 0.82
16 18 9.2e-05 0.68 9.8 12.8 4 18 630 645 628 646 0.86
17 18 2 1.5e+04 -6.4 3.0 9 13 652 656 652 656 0.70
18 18 3.3e-06 0.024 14.4 12.5 1 18 687 705 687 706 0.89

Sequence Information

Coding Sequence
ATGGCTCGTAGATACAGAGACGCCGCTGCAAAGCTGCAGCAAAATGTTCAGAAACACTTGAAAGAAATGAAAGAACTCTCGTCTTCGGAGGATGAAGAGCCTTGCGAGTCCAGCGTCCTAGAGGGTGTATTCCAGAGCTACtggcgcggcggcggcgacaCTCACATGCTGAACAGGACCAAGAACCTTCTCGAAGAAGCCATAAGCGGCCGCGCTGTGACTTGTCTGATATGCATAGGTTCAATCAAAAAAACTCACGCTATCTGGACTTGTGATCATTGTTATTCCTATTTCCATTTATCTTGCATACAAAagtggtcaaatgacagcatAAGCTTGCGCAGTGAAGAGTCTCATGGCCCTATTGCTGtaataaaacaacagaaaatTGAATGGTGTTGCCCCAAGTGCCGCAACTCCTATTCTAAAGAAGAAATTCCACGGAAATACCGTTGTTTCTGCGGTAAAACTGACAATCCGCAAAGCCACCCTTGGCTAATACCCCATACTTGTGGAGAGGTCTGTGAAAAAAGGTTGTCTACTGGTGATAATTGTAAACATAGATGCTTGCTGTTATGTCACCCTGGTCCATGTCCCCCGTGCCCACAAACTGTGAACGGAACATGTTTTTGTCAGAAGGAACATAAGAGAGTGAGGTGTAGTGCTGAAAAATGGTCCTGCGGTCAGCCATGTAAGAAAACCCTACTGTGTAAAACCCATAAATGTGAAAATGTCTGTCATGCAGGTGATTGTGCTGACTGCAGCTACACAAGCGTACAGCCTTGCCGGTGTGGCAATGATAAAGCTAAGAGACCATGTAATGATCCATTCTGGCAGTGCAAAAAGGCTTGTTACAAATTATATTCATGTGGCTACCATAAATGTGAGAAAGTTTGTCATTCAGGTGACTGCGGGATGTGTCCCAACTCAGGAATGCTATCATGTCCCTGCGGGGCTAACAAGAGATTTGTTCAATGTCCTGATGTTATGGAGACATGCTTAGGTACTTGTGGGAAAAAGCATGAAGCATGTGAGCACAGCTGCCCAGAAAAGTGTCACAATGGCAACTGTCCACCTTGCCAAGTCCTGGTGCCCAAGGAGTGCCACTGCGCAACACACACAAGGTCTCTACCATGTAGCAAAGATTATAAGTGTGATACCAAATGCAGGGGTGTAAGGTCATGTGGCAAACATGGTTGTGGAAGAAAATGCTGTAATGGAAACTGCCCTCCATGTGAGAAAACTTGTGATAAGGGACTGCAGTGCGGTAGGCACAAGTGCACCAACATCTGTCACCGTGGACCATGTTACCCATGCCCCCTAGAATCTAAAGTAACTTGCAGATGCAAAGAAACCTATGTACGAGTACCATGTGGACGGGAACGGCAGACAAAACCTCCAAAATGTAACTTACcatgcaaaattaaatacaagtgTGGTCATAGCACAGAAAATAAACATTCTTGTCACTTTGGTGACTGTCCACCATGCAAGGCAATTTGTCAAAAGCAGTACCCTAAATGTGGTCACCAGTGTAAGGCAGTGTGTCATGAATATGTTGCCGTGTTGTTTAAACAAGTAGAAAAACCTGCAACTCCATGGGAAGTGCAACCTCCAAAGACGAAGATTATGACTTTAGATTGTCCACCATGTGATACTCCTGTGCCTATGGTTTGTTTTGGAGAACACGAGACCGATAGTCAACCTTGCCATTCAGCAACTCGGAGGCCATGTGGAAGAGAGTGTGGAAAACCACTGGCCTGTGGGAATCACAAGTGCTCTTTACTTTGCCATTTATATAGCCCTGTTCCTGAGTATCCCAATGTGCCTTCTAGTTGCAGACCATGCAATAGAGAATGCTCAGTTCCTCGTCCCGAGAAGTGTGCCCATAAGTGTTCAATAAGAGCTTGTCATCCAGGTCCATGCCGGCCTTGTGAGATACTTGAGCGTTTGACTTGCCACTGTGGCGTAGCAGAAATATACCTCCGTTGCCGAGAACTTTCTGAAGCTACCGAGGAGATGCTGTCATGCAAGCAACAGTGTCCAAAGAACTTAGAATGTGGCCATCGCTGCCGTAAAACTTGTCATTCAGGAGCTTGTGGCAACCAGGTGTGCACTAAGAAAACCAAAGTCTATTGCCCATGCAGTAATATTAAGAAAGAAGCTCCTTGCAATGCGGTCAGAAGTGGAGAAACAAAGATACTGTGCGATCAAACCTGTGAAGCGAAGAAGATAGCTGCCCAAAAAGagcaagaaaaagaaaaacagagATTAAAAGAATTAGAAGAAGAGAAGAATCGTAGAGAACTTGCCGAGTATGAATGGAAACTAAGtggaaagaagaagaaatataaGGAGAAGAAGATGGTTGTTGATGTAGATGACAGAGGTTTCCTGAAGAGGTATTGGGTACCCATCTCGTCATTCCTATTTATGATGCTAGCAACtgcatattatatattttatgtataa
Protein Sequence
MARRYRDAAAKLQQNVQKHLKEMKELSSSEDEEPCESSVLEGVFQSYWRGGGDTHMLNRTKNLLEEAISGRAVTCLICIGSIKKTHAIWTCDHCYSYFHLSCIQKWSNDSISLRSEESHGPIAVIKQQKIEWCCPKCRNSYSKEEIPRKYRCFCGKTDNPQSHPWLIPHTCGEVCEKRLSTGDNCKHRCLLLCHPGPCPPCPQTVNGTCFCQKEHKRVRCSAEKWSCGQPCKKTLLCKTHKCENVCHAGDCADCSYTSVQPCRCGNDKAKRPCNDPFWQCKKACYKLYSCGYHKCEKVCHSGDCGMCPNSGMLSCPCGANKRFVQCPDVMETCLGTCGKKHEACEHSCPEKCHNGNCPPCQVLVPKECHCATHTRSLPCSKDYKCDTKCRGVRSCGKHGCGRKCCNGNCPPCEKTCDKGLQCGRHKCTNICHRGPCYPCPLESKVTCRCKETYVRVPCGRERQTKPPKCNLPCKIKYKCGHSTENKHSCHFGDCPPCKAICQKQYPKCGHQCKAVCHEYVAVLFKQVEKPATPWEVQPPKTKIMTLDCPPCDTPVPMVCFGEHETDSQPCHSATRRPCGRECGKPLACGNHKCSLLCHLYSPVPEYPNVPSSCRPCNRECSVPRPEKCAHKCSIRACHPGPCRPCEILERLTCHCGVAEIYLRCRELSEATEEMLSCKQQCPKNLECGHRCRKTCHSGACGNQVCTKKTKVYCPCSNIKKEAPCNAVRSGETKILCDQTCEAKKIAAQKEQEKEKQRLKELEEEKNRRELAEYEWKLSGKKKKYKEKKMVVDVDDRGFLKRYWVPISSFLFMMLATAYYIFYV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00932106;
90% Identity
iTF_01286103;
80% Identity
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