Basic Information

Insect: Pyrrhia umbra
Gene Symbol: -
Assembly: GCA_963891755.1
Location: OY982944.1:2031715-2062756[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 1.7 1.5e+02 4.0 0.9 2 23 435 456 434 456 0.90

2 18 0.043 3.7 9.0 0.1 1 23 466 489 466 489 0.95

3 18 0.041 3.6 9.1 2.1 1 21 613 633 613 634 0.94

4 18 0.043 3.7 9.0 3.8 2 23 697 718 696 718 0.95

5 18 0.83 72 5.0 0.6 1 23 730 754 730 754 0.90

6 18 0.00016 0.014 16.7 0.3 2 23 761 784 760 784 0.97

7 18 0.17 15 7.1 0.3 1 23 790 812 790 812 0.93

8 18 0.0041 0.36 12.2 2.9 1 23 818 840 818 840 0.98

9 18 0.22 19 6.8 0.2 2 19 851 868 851 871 0.91

10 18 0.054 4.7 8.7 0.2 1 23 950 972 950 972 0.97

11 18 2.5 2.2e+02 3.5 7.2 1 23 979 1001 979 1001 0.95

12 18 0.0017 0.15 13.5 1.8 1 23 1046 1069 1046 1069 0.95

13 18 0.00028 0.024 15.9 0.7 1 23 1076 1099 1076 1099 0.98

14 18 0.0069 0.6 11.5 0.2 2 23 1121 1143 1120 1143 0.96

15 18 0.0014 0.12 13.7 2.2 3 23 1168 1189 1167 1189 0.95

16 18 0.0014 0.13 13.7 1.4 1 23 1204 1226 1204 1226 0.97

17 18 0.00015 0.013 16.8 0.1 1 23 1232 1254 1232 1254 0.97

18 18 0.00046 0.04 15.2 0.7 3 23 1262 1283 1260 1283 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	1.7	1.5e+02	4.0	0.9	2	23	435	456	434	456	0.90
2	18	0.043	3.7	9.0	0.1	1	23	466	489	466	489	0.95
3	18	0.041	3.6	9.1	2.1	1	21	613	633	613	634	0.94
4	18	0.043	3.7	9.0	3.8	2	23	697	718	696	718	0.95
5	18	0.83	72	5.0	0.6	1	23	730	754	730	754	0.90
6	18	0.00016	0.014	16.7	0.3	2	23	761	784	760	784	0.97
7	18	0.17	15	7.1	0.3	1	23	790	812	790	812	0.93
8	18	0.0041	0.36	12.2	2.9	1	23	818	840	818	840	0.98
9	18	0.22	19	6.8	0.2	2	19	851	868	851	871	0.91
10	18	0.054	4.7	8.7	0.2	1	23	950	972	950	972	0.97
11	18	2.5	2.2e+02	3.5	7.2	1	23	979	1001	979	1001	0.95
12	18	0.0017	0.15	13.5	1.8	1	23	1046	1069	1046	1069	0.95
13	18	0.00028	0.024	15.9	0.7	1	23	1076	1099	1076	1099	0.98
14	18	0.0069	0.6	11.5	0.2	2	23	1121	1143	1120	1143	0.96
15	18	0.0014	0.12	13.7	2.2	3	23	1168	1189	1167	1189	0.95
16	18	0.0014	0.13	13.7	1.4	1	23	1204	1226	1204	1226	0.97
17	18	0.00015	0.013	16.8	0.1	1	23	1232	1254	1232	1254	0.97
18	18	0.00046	0.04	15.2	0.7	3	23	1262	1283	1260	1283	0.95

Sequence Information

Coding Sequence: ATGAGTGCCGTCGACAACAAAACTGGTTGTACCGCGGCACTGCAGGGTTTACAAGGAGACGAGCTCTCACAAAACTTTGATCAAATGTTGGACACCAATGATGGGGCCAATGATTTGGTCTATATCTTGGACGATGGCACTCAGATCAGGGCGTCACAAATACACTTCGACAATGATGATCCTTTAATAGATTTGACAGCTGAGAAAATACCATTTGTAAAATATGCTGATGATGTTACTGACACTGATGTAGATAGCGTTGATGTTCAAGAAACGAAGAAAATTAATATCGTTGAAAGTCCTGTGTCGAGATGGTCCAGCAAAAACTCTAGTCCGAAATGCAGTTTTGTTAATTCTTTGCCTTTCAAATTAGTATGCAATAATACTTCAGGGTTTGAGGCTCAGTTTACTAAATACTTAGAAGCCAACACATCCAAAACATACGCCACTTTGAACCCTGTAACGATCCGGAACAAATCGCCAAAAAGTTTGATCAAAGACAATTTTAAGAACTACGATGATAGTTATCAGAGGAACGACAATTTGTCTTACACTCGGGAGGAAATTCTGAACATGTTCAAGGACTCCCCGATGACGTCATTGCCTTATGACCAGGGTTACAGCGAGAGGAGACATGTACGGAAGACGGATCCGTCAAGACTTGTCCATAAGAGTTGGAACAAACCTATTTCGTACATCGATATTGATGGAGTTCTTATAGGCGAAGCTGAAAgtcaaatatgttttatttgcgGCAAACATGTTGACAACAGTGTGGATAAACTTTATCTTTTTGACAATGAAGACCAGCGATTACACAGGTGTTCTCCTCAAAAGAAAATGTCTACCCAATTGAAGATTATTTGTGAGTGTTGTCTAAACGAAAATTTTAAACCTTGTCGGATGAAAAGTGCGAACCAATTTTTGAATCCAGACGAATTTCTCGTCATACGAAACAATCAGCAGTACATCTTTCAGAAGGTGAAAAACTTTAGTTTTACCCACTTGGGTAAATCTAAAGATGCCATGAACAAAGATTCGAAGTTAGACAAGGAAGAGTTTGTGAAAGTCGAAATCGGATCCGACGGTGAAATTATCACGAAGCCCATAGACAATGATCCAAGGTCTGATGACATCATCATTGTTAAGGACGAGAAAAAGGAGGGTAGTTCCAGTGATGTAGAAATTATAGAACCGGAACCGGAGATAGATAATATCATAGACAATTTGGAGGAAGCTGATGAGGAGGTGAAGGAATTTTTAGGGAAATATCAGTGTGATAATAGTGAAGTCACCGAGTTAAAGTGCAGATTTTGCGAGCAAATATTTGTGGACTTATCGGAAGTGATGGAGCATTGTGAGACGCACAAACACGACTTGGAAGATGGCGACGTGTTCCCTTGCCCTCTGTGTTACTATgGTTACGCAAATTTAAAATGGCTGAAGGGTCACTTGAAGGCGGCCCACGAGAAATCCGAATCCAAACAACTGTTAAAAGAAGAAGATGAGCAaatgaaagaagaaaataaagGTGAAGAGGGAAAATCACCCAAAACGTCATCACCAATCGCCACTCGAACACGAAGTTCTAGCAAAAAAGGAGATGGCGATAGAAAAGatgaCGAAAAACCAGAAGATGTTAACAGTGAATCTAATAACGAAGCGACGGAGCCACCCATCGTAAAAACGGAAGTAAAGCAAGAATGCGTGGACAGCAGTGAGGATGAGATCTGGATCGTTCAGACCGCTGATGCCGAAGCTTCACAGGAATTGGAGAAGTTACTCTGTGTTGCCAAGagtAAAGAAGAAGGGCAGGATGGTGATACTCAGAAGACACACAAATGTTTTAATTGcagTCAAATATTCGCCAGCGCAGATGGTCTGACGAACCATCGGTGTAGAAGACGCGGGCGCAAGCGGAAATCTAAGGATCTTGTCAATTTAATATGTATACCTACGGAGGAAGACTTTTTGAAGAGAGCTCAAGGCCGTCCGAGACAAGTTGACACAGCTATAGACAATGATCTACTTGTTATGCGTCCTCGAAAACGCCGCAGCCGGGAACCGACCTCCAATCCCCAAGTGGTCACCTGCCACAACTGCAACGAATCCTTCACCTCAAAAGTCCGACTCAAGTTTCATATGCAGTTCCACGACTCCACAAACCTGGTCCGTCCAGACGGCAGCTACTCCTGCTCGGAGTGTGACGGAGCCACCTTCGCCACGGAGACCGAACTCTTCGACCACGTGCACTTCCAACATGACAAGCAGAAGCGATGGCAGTGTCCCGTTGAGGGCTGCGGGAAGACCTTTTTTCTAAGGGCAACCCTAACGAAGCACAGTCGCACTCACACAGACACGCGTCGCTACGTGTGCGTTACTTGCGACAAGCGGTTCCTAGACAAACAGACCTTGGACGAGCATGGAGTGACACATTTACAGATTAAACCCTTCCAATGCCACATATGCCTGAAGCAGCTGACGCGTCGCTCGCGGCTGCGCATGCACGTGCGCGCGCACGAGGAGGAGCTGGCGCCCCGGCTCGTGCGCGTCTGTGCCGTGTGCAGCCGCGCCTTCCGGGACCAGCGCCATGCACAGGAGCACGCAACGAAGTCTACGGAATGCATTGAGGCGTTCGCGAACGAGCTGAAGGAGGAAGCTGAGGAGATGACGGTACAGCTGTCTCCCACCAGTGGGCTGGTCAGGCATACCGTGCAGATTGTGGAGTCTCCGAAGCTGTCGAAGCCGATCAAGCGGCAGGTGTCGGGCGAGGTGGGCGAGCCGCTGCTGGCCCAGCTGGCGGACGAGGCTCGCCCGCTCATCCGAGTCGTGGAGATCGAGAAGGCCTTCCGCTGCGAGTACTGTGAAGACGTATTCTACTTGGAGAGCGGGTTGAACAGTCACCGCGCGATTCACAAGGGTGTGAAGAACCCGTTCACTTGCCACATCTGTAAAGTGAGCTTCGCCACTTATTCCAGGTGTACCACACATAAGACGACCCACGGGTTCTACAAGCGGTCGCTGGCGGACGCTAAGAAGCAGGCTGACGGACTGTCGCCCGCCGAGCCCGAGGGCGCTGCCGGCCGCTCGGCCACCGGTATCCTCGGATACGGAGACTTCCCAGTAGTCAAACACTTCTTGTGCGAGGACTGCGGGCGGTCCTACCTGCACTGGACGTACCTACAAGTACACAGACGAATGAAACACGCGAACGAAAACTTTCTGTACAAATGTAACCAGTGCGAGCTTACATTTCCTAACagTTGGAGCTTAGCGTATCATCGCAAGAAAGTCCACGGAAAGACAGGCCCTGATGATCCTGGCGCCACCAGCAAGATTAGCAGGGATGACTACAGgATACCATGTCGAGATTGTAATGAGGTGTTGCCAAACAAAACCGCGCTATACAAACATCGGAAGAAAGAACACAGCGACGGAACCACTCGCGCCAATAATAAACCTGGGCAGTACGCGAGTGAAGACTCCGTCTCCGGCGGAGCGTGCCCGCACTGCTCCGCCACCTTCACGCACGCCGCCGACCTGCACAAGCATGTCAAGGAGGTGCACGGCGCGGAGGCGGCGTGGGCGGGCTGCCGCGCCGGCCGGCCGCACGTGTGCGCCGTGTGCGGGCACGCCTTCCgcacgctgtccatgcgcaacgAGCACCTGCGCGTGCACACCGGCGAGCGGCCCTTCCCCTGCGACGTGTGCGGCGTCGCCTTCCGCAGGTCTACAGCTATGCGGAACCACCGTCTCATACACACGGGGGTCCGCGCGTGGGCCTGCGGACGCTGCCCCAAACGGTTCCGTATCCGGTCGGACCTGCGCACGCATCTGAGATTGAAGCACCCCGCTACTATTGTCGTTGTTGAGATGGAGGGCTTAAACCCGTCTTCGGAGGAGGTGATGAAGACGCTAGCACAGCAAAATGTTCCACATGACAAGCTCATTGAAATCACTAAGATGTCATTCTCAAAGGGCACGTCGAGCGTGATCCCGTCGTGCGCGCGCGCGCTGTCTGCGCTGAGCACGGTGCCGCGCACGCACGTGGCCTGCATCaagcccgcgcccgcgctcaTGCTGGATGAATTCCAACCGGCCCGGCGCGGCCGCGGCATCGCTAAGAACCCGCGCCGCCCCAAGATACTACAGCGAGGGGAGGCCGCCCCGCACGACAGCGCCGCCTACCCCATCGTTAGTTCAGAGGAGCTGTCCGACCTGAACGTGCAGCTGTTGCTACGCGACGGTGTGCTGGTCAACGGCAACCAGATGGTGCAGCTGCAGTTGGATGACCCCATGCTTATGGAGTGA
Protein Sequence: MSAVDNKTGCTAALQGLQGDELSQNFDQMLDTNDGANDLVYILDDGTQIRASQIHFDNDDPLIDLTAEKIPFVKYADDVTDTDVDSVDVQETKKINIVESPVSRWSSKNSSPKCSFVNSLPFKLVCNNTSGFEAQFTKYLEANTSKTYATLNPVTIRNKSPKSLIKDNFKNYDDSYQRNDNLSYTREEILNMFKDSPMTSLPYDQGYSERRHVRKTDPSRLVHKSWNKPISYIDIDGVLIGEAESQICFICGKHVDNSVDKLYLFDNEDQRLHRCSPQKKMSTQLKIICECCLNENFKPCRMKSANQFLNPDEFLVIRNNQQYIFQKVKNFSFTHLGKSKDAMNKDSKLDKEEFVKVEIGSDGEIITKPIDNDPRSDDIIIVKDEKKEGSSSDVEIIEPEPEIDNIIDNLEEADEEVKEFLGKYQCDNSEVTELKCRFCEQIFVDLSEVMEHCETHKHDLEDGDVFPCPLCYYGYANLKWLKGHLKAAHEKSESKQLLKEEDEQMKEENKGEEGKSPKTSSPIATRTRSSSKKGDGDRKDDEKPEDVNSESNNEATEPPIVKTEVKQECVDSSEDEIWIVQTADAEASQELEKLLCVAKSKEEGQDGDTQKTHKCFNCSQIFASADGLTNHRCRRRGRKRKSKDLVNLICIPTEEDFLKRAQGRPRQVDTAIDNDLLVMRPRKRRSREPTSNPQVVTCHNCNESFTSKVRLKFHMQFHDSTNLVRPDGSYSCSECDGATFATETELFDHVHFQHDKQKRWQCPVEGCGKTFFLRATLTKHSRTHTDTRRYVCVTCDKRFLDKQTLDEHGVTHLQIKPFQCHICLKQLTRRSRLRMHVRAHEEELAPRLVRVCAVCSRAFRDQRHAQEHATKSTECIEAFANELKEEAEEMTVQLSPTSGLVRHTVQIVESPKLSKPIKRQVSGEVGEPLLAQLADEARPLIRVVEIEKAFRCEYCEDVFYLESGLNSHRAIHKGVKNPFTCHICKVSFATYSRCTTHKTTHGFYKRSLADAKKQADGLSPAEPEGAAGRSATGILGYGDFPVVKHFLCEDCGRSYLHWTYLQVHRRMKHANENFLYKCNQCELTFPNSWSLAYHRKKVHGKTGPDDPGATSKISRDDYRIPCRDCNEVLPNKTALYKHRKKEHSDGTTRANNKPGQYASEDSVSGGACPHCSATFTHAADLHKHVKEVHGAEAAWAGCRAGRPHVCAVCGHAFRTLSMRNEHLRVHTGERPFPCDVCGVAFRRSTAMRNHRLIHTGVRAWACGRCPKRFRIRSDLRTHLRLKHPATIVVVEMEGLNPSSEEVMKTLAQQNVPHDKLIEITKMSFSKGTSSVIPSCARALSALSTVPRTHVACIKPAPALMLDEFQPARRGRGIAKNPRRPKILQRGEAAPHDSAAYPIVSSEELSDLNVQLLLRDGVLVNGNQMVQLQLDDPMLME

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00121732;
90% Identity: iTF_00785432;
80% Identity: -