Ppec005432.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pyrocoelia pectoralis
Gene Symbol
Hr39
Assembly
GCA_036250285.1
Location
CM070074.1:83464540-83472381[+]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 1.7 4.1e+04 -5.1 7.2 73 157 166 252 117 294 0.45
2 4 1.7e-08 0.00042 21.3 0.0 1 26 395 420 395 464 0.83
3 4 0.088 2.1e+03 -0.8 0.0 92 113 461 482 416 505 0.70
4 4 4.1e-73 9.8e-69 234.1 0.1 205 408 525 723 507 723 0.97

Sequence Information

Coding Sequence
ATGGCCGCAAACATGAGGTCTCCCAATGTATCTGTCACACCGATAAATATAGAACCATATTCTTCGGCTTCTATATCTAATGGGGTTCTACCAACTCATTCTCACATCACTACCGATTTGCCATGCTCTCACAATGGGGTACTGTCGACTACATCCCTTGCGATCAACAATGGAGATACTTTGGATAGCAGTTCTGATGCGGAGGTTGCACAGATTGATTTCAACTCTGCTACTGTTAATTTACGCCAGAAGAAGAAGCCCGATGAAAATGATATACCAAGACCAATGTCTTGGGAAGGTGAACTTTCTGAGGGTGAGAGAGATATGTGTATTGATGAGGACAGAGGATCCTCACAGtttCCGGAGAATCTCTCAGTTGTACAATCAAAGCAGAGTTTGCCACTATCAGAACAAAAAGGGAGTCCCGTATTAGTGTTAAAGCAACAAACTGTAGGTAACTACTCTCTTCACAGCACACCCAGCAACTCCCCTCTTCTAAACCAGCGGCATCCCGGTAGTGTTTCCGTATTAAGTCATAAGGACATTATGCAAAAAGCTCTTAATATGCCTCCCACTCCGAGTCCGGATTCGGCGATACATTCGGCATATAGCGTGTTTAGTTCTCCCAGTCAAAGCCCTTTAACTCAAAGACATTTAACGCCAAATTTAAGTCGAAATAACAGTGACGCTTCTCATTCTAGTTGTTGTAGTTACTCTAGTGTTTCAGTTTCTGTTTCACCGACACAGCAATTTTCACCTAATCATAGTCCCATTCAGGGTCGCCATATACACAACGCCGTTCACAACAGTCCATTACATCATAACGTTTTGTATCGCAATCTTCAAGATGACTGCAACATTCAGTACGCACCTGATCACGAAGTTCTTGAAGAAACTGAAGATAAGACTGGTTTAGTTCACACTTCTTTACCCGCACAACCCGGTATCTCCCGACAGCAGCTAATCAATAGTCCGTGTCCAATTTGTGGTGATAAAATATCTGGATTTCACTATGGAATTTTTAGTTGCGAATCTTGTAAAGGTTTTTTTAAACGCACTgtacaaaatcgaaaaaattatGTTTGCTTAAGAGGTGCTGCATGTCCTGTTACTGTAGCAACAAGGAAAAAGTGTCCTGCTTGTCGTTTCGACAAATGCTTACAATGTGGAATGAAACTTGAagCTATTAGAGAAGACAGAACTAGAGGAGGTCGATCTACATATCAATGTTCGTACTCATTACCGCCATCCCTAACAAATCATCCTGAGTTAAGGGCTAGTGCTACAGATTTACGTCAAGGTTATGATACACCTCAACAGATATTAAGGGTAAAATTAGAACCTTCCGATTGTGGAATGTATATGAAAAGATCAAATATAGGAACTTCAAGATTAAGTGTCCCACCGCTATTGcaaGAAATAATGGATGTGGAACACCTTTGGCATTACAGCGAattagaattaaataaattaacagaTGGTACCTTAGGCAAAGCCGGTTCAAGCAGTGGAGTTCATAATTTATCGTCGCACCCGTTACTTGCTGGTACCGCTCTTGCTGGCTCGACTGACACAAATCCAGATTTTGTGGCAAATTTGTGCAATATAGCCGATCATCGattatacaaaattgtaaaatggtgtaaaagtttgccacttttcaaaaatatttcgatcgATGATCAaatatgtttgttaataaattctTGGTGcgaattattattgttttcgtGTTGTTTTCGTTCTGTCTCCACACCTGGTGAAATCAGGATATCGTTAGGTAAAAGTATTAGCTTGGAACAAGCAAAGGAAATGGGTTTAGGAGCCTGCATAGAAAGGATGTTAAATTTTACGGACCATTTAAGACGTCTTAGAGTTGATAAGTATGAATATGTTGCCATGAAAGTAATTGTGCTACTCACGTCAGACACATCTGAATTAAGAGAAGCAGAGAAAGTAAGAGCTTCTCAAGAAAAAGCTCTTCAAGCATTACAGCATTATACCTTAGCTCACTATCCAGATTCTCCAGCTAAATTCGGAGAACTGTTATTAAGGATACCAGAGCTACAGAGAACTTGTCAGGTTGGAAAAGAAATGCTGACAATTAAATCAAAGGACGACGAAGGGCCAAGTTTCAACCTGCTCCTGGAGCTGCTTCGAGGGGACCACTAG
Protein Sequence
MAANMRSPNVSVTPINIEPYSSASISNGVLPTHSHITTDLPCSHNGVLSTTSLAINNGDTLDSSSDAEVAQIDFNSATVNLRQKKKPDENDIPRPMSWEGELSEGERDMCIDEDRGSSQFPENLSVVQSKQSLPLSEQKGSPVLVLKQQTVGNYSLHSTPSNSPLLNQRHPGSVSVLSHKDIMQKALNMPPTPSPDSAIHSAYSVFSSPSQSPLTQRHLTPNLSRNNSDASHSSCCSYSSVSVSVSPTQQFSPNHSPIQGRHIHNAVHNSPLHHNVLYRNLQDDCNIQYAPDHEVLEETEDKTGLVHTSLPAQPGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAACPVTVATRKKCPACRFDKCLQCGMKLEAIREDRTRGGRSTYQCSYSLPPSLTNHPELRASATDLRQGYDTPQQILRVKLEPSDCGMYMKRSNIGTSRLSVPPLLQEIMDVEHLWHYSELELNKLTDGTLGKAGSSSGVHNLSSHPLLAGTALAGSTDTNPDFVANLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSVSTPGEIRISLGKSISLEQAKEMGLGACIERMLNFTDHLRRLRVDKYEYVAMKVIVLLTSDTSELREAEKVRASQEKALQALQHYTLAHYPDSPAKFGELLLRIPELQRTCQVGKEMLTIKSKDDEGPSFNLLLELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00951009;
90% Identity
iTF_00853997;
80% Identity
iTF_01284820;