Lyun015932.1
Basic Information
- Insect
- Lamprigera yunnana
- Gene Symbol
- Hr39_1
- Assembly
- GCA_013368075.1
- Location
- JABVZV010002197.1:5551833-5612748[-]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.71 6.9e+03 -3.8 5.0 120 159 196 229 112 299 0.45 2 3 6.2e-09 6e-05 22.7 0.1 1 48 394 442 394 464 0.65 3 3 2.9e-65 2.8e-61 208.3 0.2 203 379 522 693 456 697 0.90
Sequence Information
- Coding Sequence
- ATGGCCGCAAACATGAGGTCTCCCAATGTATCTGTTACTCCGATCAACATAGAACCTTATTCTCCCACTTCTATGAATGGGGTTCTATCAACACACAACCACATCCCGACAGATACCCAACGCCCTCATAATGGAGTATTATCGAATACTTCAATTTCTATTAACAACGGGGACACTTTGGACAGCAGTTCTGATGCAGAAGTTGCGCAAATTGATTTTCATTCATCCACCGTTAATTtgagacaaaagaaaaaattagacgAAAATGACATTCCTAGACCGATGTCTTGGGAAGGTGAGCTTTCTGAAGGAGAAAGAGAAATGTGCATAGATGAAGATGGAGGGTCATCTcagcTCCCCGAAAACTTATCGGTTACACAGTCGAAACAAAACTTTCCTGTATCGGAACAAAAAGGTAGTCCCGTATTAAGACTAAAACAAGCGTCTGTCGGTAATTATTCGTTGCACAGCACACCTAGTAATTCTCCACTTTTAAATCAGAGGCATCTCGGTAGTGTGCCTATTTTAACTCACAAAGACATTATGCATAAAACTTTGAATGTGCCACCAACTCCCAGCCCAGATTCTGCTATACATTCGGCATATAGTGTGTTTAGTTCTCCGAGTCAAAGTCCTCTGACGCAAAGACACTTAACTCCCAATTTAAGTCGAAATAATAGTGACGCTTCTCACTCTAGTTGTTGTAGTTATTCTAGTGTTTCAGTTTCTGTATCGCCTACTCAGCAATTTTCTCCCACTCACAGTCCCATACAGggACGACATATGCCTAGTGGAATTCATAGTAGTCCTTTGCATCATAATGTTTTATATCGTAGCCTTCAGGATGATTGTACCCTTCAATATCCACCTGAACACGAAGGTCTCGAAGAGACCGAAGATAAGACTGGTGTAGTACACGCTTCATTACCTGCGCAACCTGGAATATCACGACAGCAGCTTATTAACAGTCCGTGCCCAATTTGTGGTGATAAGATATCTGGATTTCACTATGGAATCTTCAGTTGCGAATCTTGTAAAGGATTCTTTAAACGTACTGTACAGAATCGAAAGAATTACGTTTGCTTGAGAGGTGCCGCTTGTCCTGTTACCGTAGCTACAAGAAAGAAATGTCCAGCTTGCCGGTTCGATAAATGTTTACAGTGTGGAATGAAACTTGAAGCTATAAGAGAGGATAGGACGAGGGGAGGTAGATCCACATATCAATGCTCTTATTCGTTACCACCGTCTTTAACAAATCATCCGGAATTAAGAGCGAGTGCAACAGATCTGAGACAAGGCTATGATGCAGCTCAACAACAAGTATTACGAGTTAAATTAGAACCTTCTGATTGTGGAATGTATTTGAAAAGATCTACAAATGCAAATTCGAGATTAACTGTCCCTCCATTATTACAAGAAATAATGGATGTGGAGCATCTCTGGCATTACAGTGAATTGGAGTTGGGTAAATTAAGTGATACTACTTTAGGTAAAGCTGGTTCAAGTGCGGTCCATAATTTATCTTCACATCCGTTACTTGCCGGTACAGCTCTTGCTGGTTCTACCGATACGAATCCagattttgttgcaaatttgtgtAATATTGCAGATCATCGATTgtacaaaattgttaaatggTGTAAAAGCCTACcacttttcaaaaatatatccATCGATGAtcaaatatgtttattaataaattcttggtgcgaattattgttattttcttgttgttttcGGTCAGTATCTTCTCCAGGAGAAATTCGAATATCGTTAGGTAAAAGTATTAGTTTGGAACAGGCAAAAGAAATGGGTTTGGGAGCCTGTATAgaaagaatgttaaattttactgATCATCTAAGACGTCTTAGGGTGGATAAGTATGAATATGTTGCCATGAAAGTTATTGTATTACTCACATCAGataCTTCAGAATTACGAGAAGCGGAAAAAGTTCGAGCTTCGCAAGAAAAAGCTTTGCAAGCTTTACAGCATTACACTTTGGCCCATTATCCAGATTCTCCTGCTAAATTTGGAGAACTCTTGCTGAGAATTCCAGAATTACAAAGAACTTGTCAGGTGTGTTACATTATTCGAAACCTGTTAGATATTCTAATAATATGTGATTACATCATTTGGTTCAGTTTCCTCttccttttctttgtattaaaaatgcaCTTGTTATTATCAAAGGTCAGcaactttttaaattga
- Protein Sequence
- MAANMRSPNVSVTPINIEPYSPTSMNGVLSTHNHIPTDTQRPHNGVLSNTSISINNGDTLDSSSDAEVAQIDFHSSTVNLRQKKKLDENDIPRPMSWEGELSEGEREMCIDEDGGSSQLPENLSVTQSKQNFPVSEQKGSPVLRLKQASVGNYSLHSTPSNSPLLNQRHLGSVPILTHKDIMHKTLNVPPTPSPDSAIHSAYSVFSSPSQSPLTQRHLTPNLSRNNSDASHSSCCSYSSVSVSVSPTQQFSPTHSPIQGRHMPSGIHSSPLHHNVLYRSLQDDCTLQYPPEHEGLEETEDKTGVVHASLPAQPGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAACPVTVATRKKCPACRFDKCLQCGMKLEAIREDRTRGGRSTYQCSYSLPPSLTNHPELRASATDLRQGYDAAQQQVLRVKLEPSDCGMYLKRSTNANSRLTVPPLLQEIMDVEHLWHYSELELGKLSDTTLGKAGSSAVHNLSSHPLLAGTALAGSTDTNPDFVANLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSVSSPGEIRISLGKSISLEQAKEMGLGACIERMLNFTDHLRRLRVDKYEYVAMKVIVLLTSDTSELREAEKVRASQEKALQALQHYTLAHYPDSPAKFGELLLRIPELQRTCQVCYIIRNLLDILIICDYIIWFSFLFLFFVLKMHLLLSKVSNFLN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00951009;
- 90% Identity
- iTF_00854115; iTF_00003084; iTF_00002600; iTF_01284575; iTF_01284820;
- 80% Identity
- iTF_00854115;