Ppur021955.1
Basic Information
- Insect
- Pyrausta purpuralis
- Gene Symbol
- LRRFIP2
- Assembly
- GCA_963924145.1
- Location
- OZ001649.1:2834521-2851778[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-75 1.2e-70 240.1 17.5 1 293 131 411 131 416 0.87 2 2 1 6.9e+04 -5.7 15.5 1 49 414 461 414 488 0.67
Sequence Information
- Coding Sequence
- ATGGGCAGGATTACAAAAATGGCTACTCCTTCCAACAGTGATGTGGACAGTGCCGGTGACACATTCACAGATGGTGATTTTGATGAGAGCGATGAAGAAACTGTCATAGAAAGGAGTGATGATTCGCCCAAATCACAAATTCCTGTGAATGAAACTGTAAATGCAGATGTTAAAAATGGTCGTCACAATAGTTTAACAGACATTAATTCTAGGGCAAATGCTAATGGTCTAGAACATCAACCGAAGGTTAACGGACTAAAAAATACTGATAAGGAGCAGTACAGTGCAATGGAGAGCCGCAGTAATGGTGATGTGGTGGACTTTCGAAGAGACTCTCATGGTGATCAGAATCCGTCAATTGTTGGAATCATTGGAGATCAACATAATCATGCAGAACAGCGTCTTGCGGCGCGGCGAGCCGCGCGGGCGGAGGCGCGGGAGATCCGCATGCGGGAGTTAGAGCGGCAGCAAAGGGAGCAGGAGGATCATGCGGACAAAGCGTACGACATGTACGCGGGCAAGCTGCCCGATACGGTGGCGCGGCGAGGCGGGTCGCGGCTGGCGGCGCTCAGCCCCGGCGGGCTGCACTCGCCGCGGCGGAGCTCCGAAGACTCCGCCGATGACGTCTTCAACATTAAGGACCTCAGGCACGAGCTGAAAGAAGTGGAGGAGAAGTTCCGCAAGGCGATGATCCTGAACGCGCAGCTGGACAACGACAAGGCGGCGCTCGGCTACCAGCTCGAGCTGCTCAAGGACCGGATAGAGGAGCTGCAGGAACAGTACGCGCAACTCTCGCGCGAACATAAAGAGAAGTGCTCGGCGCACGAGCGACTTAGACGCGAGCACGCGAGCCTCGAGCTCGAGGTGACGACGGCTCGTGACGCGGTGCGGGCACGGGACGCGGCCGCGGCGGCCGCGGGGTTCGCCTTCGCGGAGGCGGGGCCCGGCGCCGACGTGCCCGGCTTCGGCGCCGTGCCGCCGCTCGCGCTCGTCTCGCACCTCGCCGACCAGATGCTGGGCGACGCGTCGGAGGGGACGCTGGACGTCCGGTTGCAGAAGCTGCTGAGCACAAAGACGTCCCTGGAGTCTGAGGTGCGCAAGCTGAAGCTGCAGCTGAACGAGGAGCGCGCCGCGCGGCAGAACGGCGTCGCTAACCACCACGACCAGGAGTACGAGACTGAGCTGGAGACCTTACGGCGCCATCTAACGGAGGCAAAAGCTCGCGCGGCGCGGGCGGAGGCCGAGGCGGCGCTGCAGGCCGCCGGCGCCGCGCGCCTCGAGGCGCAGGTGGCGCGGCTCAAGGCGCGCCAGGACCACCAGGACGAGCACGAGGAGCTGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGGGAGGCGCGGGAGGCGCTGAACCGAGTGGAAGAGCTGGAGACGGAGAACAGCCACCTCAGCAAGCGGCTCGACAAGCTCAAGAACGCCAAGTCCGCCCTCCTCAAGGAGCTGTGA
- Protein Sequence
- MGRITKMATPSNSDVDSAGDTFTDGDFDESDEETVIERSDDSPKSQIPVNETVNADVKNGRHNSLTDINSRANANGLEHQPKVNGLKNTDKEQYSAMESRSNGDVVDFRRDSHGDQNPSIVGIIGDQHNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAGKLPDTVARRGGSRLAALSPGGLHSPRRSSEDSADDVFNIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELQEQYAQLSREHKEKCSAHERLRREHASLELEVTTARDAVRARDAAAAAAGFAFAEAGPGADVPGFGAVPPLALVSHLADQMLGDASEGTLDVRLQKLLSTKTSLESEVRKLKLQLNEERAARQNGVANHHDQEYETELETLRRHLTEAKARAARAEAEAALQAAGAARLEAQVARLKARQDHQDEHEELLKQERRKLQREAREALNRVEELETENSHLSKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01280310;
- 90% Identity
- iTF_01280310;
- 80% Identity
- -