Ppur040214.1
Basic Information
- Insect
- Pyrausta purpuralis
- Gene Symbol
- -
- Assembly
- GCA_963924145.1
- Location
- OZ001658.1:991361-995830[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.7e-10 1.3e-07 33.0 0.0 4 39 177 213 174 217 0.90 2 4 1.2e-10 9.6e-08 33.5 0.3 2 39 229 266 228 269 0.92 3 4 2.6e-13 2.1e-10 42.0 0.0 4 45 286 328 283 328 0.95 4 4 3.2e-17 2.6e-14 54.5 0.1 1 39 335 374 335 379 0.91
Sequence Information
- Coding Sequence
- ATGCCGGGGCACGGTGTGTGTCCGGTGAAGTGTGAGCCGCATTCTGACGAAGAAGACAGCAACCCGCAGTACTCGCTCGGCTACTTAACCAATCAGCTACCTTTAAGGCATTTCCCAGTTAAATTAGAAAATGGCGTCCAACACGAAAATGATAATCACGACCACATTTTGCAAGATTTACAGACGGGCTTGGAAGAGTTGGCTCCCCCAGCGCCAGCTGGCCCAGCTGCCATTCCAGTGTGCGTCAAACAGGAGCCCCCGGAAGCACCCCCCGCGCTTACTTTGGAGAATTTGGAGCCGGCCCCAAACGTAAACTCGACGgGCTCAACGTTGCTGGATCGACGCATGGCAATGCTCATCCACTCAGAAGTGCCGGGCTCATCAGACTTCGTGCCGCTGATGGCTGTCAAAGATGAACCGCTCTCCGAAGGAGAACAACAACAGTTTATCGGCGAGGACTCGAGTGACTCGTGCAGCCAGCCGGAGCCATTGCATCCTCGGTCCAGCCCTAAGAGCTGGACGCAAAGAGATATGGACAACGCACTCGACGCGCTGAGGAATAGGAATATGAGTCTCACCAAGGCATCAGCCACTTACGGCATTCCCTCCACGACGCTTTGGCAGCGTGCGCACAGATTGGGCATCGATACGCCGAAGAAAGAAGGTGCTTCTAAGTCCTGGAGCGAAGCAGACCTGAGGGGGGCGCTACATGCGTTAAGAGCTGGGGCGATATCGGCAAATAAGGCTAGCAAAGCGTACGGCATCCCCAGCAGTACTCTCTATAAGATAGCGCGGCGTGAGGGCATCCGCCTCGCAGCTCCGTTTAACGCAGCACCCACGGCTTGGCGTCGATCTGACCTAGAGCAAGCTCTCGCGTCTATTCGTTGTGGCGCTGCGTCCGTCCAACGAGCCGCTTCGCAGTTCGGAATACCTACCGGGACATTGTACGGACGGTGTAAAAGAGAAGGCATTGAGCTATCCCGATCCAACCCCACCCCGTGGTCTGAAGATGCCATGGGAGAAGCACTGGAAGCTGTTCGgGTGGGACAAATGTCCATTAACCAGGCGGCCATCCACTACAACCTGCCCTACTCCTCACTCTATGGCCGGTTCAAGAGGATCCATTCAGTTACCAAGTTTCATACACAGAACCTGCAGCCTTTACAGCAGCAAGAGGTCAACAAAACGATAGAGATGGAGCATCAAAATCACCCGCCAGACATGTATTACCAACAACCTTTGCAGGGCCACGCGATGCATACTCCTGAGCAAAGTCCTACCATAGTACAAAACCAGTACTACAACACTATTAGCGAAGTTCCAACGCACAATAATGTCTTACATGAACAGTATTACGCTGGTCAAACGATGTATTATAGCCAGAGTTGTAACGGCATCGTGACCAGTTGA
- Protein Sequence
- MPGHGVCPVKCEPHSDEEDSNPQYSLGYLTNQLPLRHFPVKLENGVQHENDNHDHILQDLQTGLEELAPPAPAGPAAIPVCVKQEPPEAPPALTLENLEPAPNVNSTGSTLLDRRMAMLIHSEVPGSSDFVPLMAVKDEPLSEGEQQQFIGEDSSDSCSQPEPLHPRSSPKSWTQRDMDNALDALRNRNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGASKSWSEADLRGALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRSDLEQALASIRCGAASVQRAASQFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRIHSVTKFHTQNLQPLQQQEVNKTIEMEHQNHPPDMYYQQPLQGHAMHTPEQSPTIVQNQYYNTISEVPTHNNVLHEQYYAGQTMYYSQSCNGIVTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01502894;
- 90% Identity
- iTF_01279182;
- 80% Identity
- -