Paur013093.2
Basic Information
- Insect
- Pyrausta aurata
- Gene Symbol
- -
- Assembly
- GCA_963584085.1
- Location
- OY757261.1:12567975-12573944[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 5.5e-11 6.4e-08 33.0 0.0 4 39 178 214 175 218 0.90 2 4 3.9e-11 4.6e-08 33.5 0.3 2 39 230 267 229 270 0.92 3 4 7.2e-15 8.4e-12 45.4 0.1 2 45 285 329 284 329 0.96 4 4 1e-17 1.2e-14 54.5 0.1 1 39 336 375 336 380 0.91
Sequence Information
- Coding Sequence
- ATGCCGGGACACGGCGTGTGTCCGGTGAAGTGTGAGCCGCACTCTGACGAAGAGGACAGCAACTCGCACTACTCGCTCGGCTACTTGACAAATCAGCTACCTTTAACGCAATGCCCAGTTAAACTAGAAAATGGCGCACAACACGAAAATAGTAATCATCACGATCACATTTTGCAAGACTTACAGACAGGCTTGGAAGAGTTGGCTCCACCAGCGCCGGCGGGCCCCGCTGCCACGCCGGTCTGCGTCAAACAGGAGCCCCCAGAAGCACCTCCCGCGCTCACCCTGGAGAATTTGGAGCCGGCCCCCAACGCAAACTCGACGGGCTCAACGTTGCTGGACCGACACATGGCGATGCTCCTCCACACAGAAGCGCCCGACTCCTCCGACTTCATGCCGCTGATGGTTGTCAAAGATGAACCGCTGTCTGAAGGAGAACAACAGCAGTTGATCGGCGAGGACTCGAGTGACTCGTGCAGTCAGCCGGAGCCTTCGCAACCTCGCTCCAGCCCCAAAAGCTGGACGCAACGAGACATGGACAACGCACTCGACGCGCTGAGGAACCGGAACATGAGTCTCACGAAGGCGTCAGCCACTTACGGTATTCCGTCCACGACGCTCTGGCAGCGCGCGCACCGCCTGGGCATTGATACGCCAAAGAAAGAAGGCGCTTCCAAGTCCTGGAGCGAAGCTGACCTGAGAGGGGCGCTCCATGCCCTGAGGGCCGGGGCGATATCGGCGAATAAGGCTAGCAAGGCATATGGCATCCCCAGCAGCACTCTGTACAAGATAGCCCGCCGCGAGGGCATCCGGCTGGCTGCTCCGTTTAATGCAGCGCCGACGGCATGGCGGCGAGCTGACCTGGAACGAGCGCTCGCGTCTATACGCTGCGGCGCCGCGTCAGTGCAACGCGCTGCCACGCAGTATGGGATACCCACCGGTACATTGTACGGGCGGTGTAAAAGAGAAGGCATTGAGCTGTCCCGATCCAACCCCACTCCTTGGTCTGAAGATGCCATGGGAGAAGCTCTGGAAGCTGTTCGAGTGGGACAAATGTCAATAAACCAGGCTGCCATCCACTACAACCTGCCCTACTCATCACTCTATGGCCGGTTCAAGAGGATCCATTCAGTTACCAAGTTTCATACACAGAACCTGCAGCCTTTGCAGCAGCAGGAGGTCCACAAAACGATGGAGATGGAGCATCAAAATCACCTGCCAGAGATGTACTACCAACAACCTTTGCAGGGCCACGCGATGCATACTCCCGAGGAAAGTCCTACTCTAGTACAAAACCAGTACTACCACAATACCATTAGCGAAGGTCCAATGCACAATAATGTCTTACACGAACAGTATTACGCTGGGCAAGCGATGTATTACAGCCAGAGTTGTAACGGCATTGTGACCAGTTGA
- Protein Sequence
- MPGHGVCPVKCEPHSDEEDSNSHYSLGYLTNQLPLTQCPVKLENGAQHENSNHHDHILQDLQTGLEELAPPAPAGPAATPVCVKQEPPEAPPALTLENLEPAPNANSTGSTLLDRHMAMLLHTEAPDSSDFMPLMVVKDEPLSEGEQQQLIGEDSSDSCSQPEPSQPRSSPKSWTQRDMDNALDALRNRNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGASKSWSEADLRGALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRADLERALASIRCGAASVQRAATQYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRIHSVTKFHTQNLQPLQQQEVHKTMEMEHQNHLPEMYYQQPLQGHAMHTPEESPTLVQNQYYHNTISEGPMHNNVLHEQYYAGQAMYYSQSCNGIVTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01502894;
- 90% Identity
- iTF_01282147; iTF_01281230;
- 80% Identity
- -