Pnig010161.1
Basic Information
- Insect
- Pyrausta nigrata
- Gene Symbol
- stc_1
- Assembly
- GCA_949316185.1
- Location
- OX438943.1:4461733-4484447[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 2 3.6e+04 -4.1 1.6 15 19 408 412 407 412 0.81 2 13 0.043 7.7e+02 1.2 1.4 2 10 440 448 440 448 0.92 3 13 3.3e-05 0.58 11.2 18.1 4 19 456 471 454 471 0.93 4 13 9.9e-08 0.0018 19.2 10.6 1 18 507 524 507 525 0.98 5 13 0.00015 2.6 9.1 17.0 1 19 566 584 566 584 0.98 6 13 4.4e-05 0.78 10.8 10.4 1 19 625 647 625 647 0.88 7 13 2 3.6e+04 -5.1 2.2 6 10 677 681 677 681 0.94 8 13 0.0029 52 4.9 7.4 1 11 687 697 687 698 0.95 9 13 0.03 5.4e+02 1.7 0.3 3 10 701 708 700 709 0.92 10 13 3.3e-06 0.058 14.4 14.0 3 19 716 732 714 732 0.92 11 13 0.00043 7.7 7.6 9.4 10 18 779 787 776 788 0.92 12 13 7.1e-08 0.0013 19.7 13.1 1 17 824 842 824 848 0.84 13 13 0.0066 1.2e+02 3.8 8.8 1 12 854 864 854 877 0.76
Sequence Information
- Coding Sequence
- ATGTCGCAGTGGAACAATTCTTACGCATATAATAACCAATACCAAAATGCTAACACCTGGAACGGAGATCCGAATGGCCAATACGCCAACCAAGGTTATTACCCTCCTAACCCCAATCGCCAATACGACTCCACCAACCAACAGTATGTAAGCTTTAATGAATTCCTCACTCAAATGCAAGGCAATGGAGCATCCCAGCCTAGTGGTAATAACTTTAGCAATTCGCAGTTCCAAAATTATGACCAATATGATTATCAAAACATGCCATCTACCTCCCAGAATGCACAAGAATCTTATTATGCTGGTAGTAGTTCAAATGCTGAGTCTTATAGTCATAGTAAATATGAATCACAACCCCAAGAGCAAACTTCCTATTCGAATGATTTAATACTCAAATCAAACTTGACAGCAACTGCTTCTGAATTTGTGCCAAAAAATTCTACAGTAAAGCCATCAACTAGTGCTCAAAATATCCCCGAAGTGACCAACTCTACTAGTAGTAATAATAGTGGTACTGAGTATAAAAAGAGTCATGGAAGTTCTTCTGAAACAAACTGGAGAGAGAGACCCCAGTCATCTCAACAAAAtggtgaaataaaaaacaatagtcGCTAtcaagataataattataaacaccAAGATAATAGTAATAGAAACCGAGATCGCGACCGTGATCGGAACAGATACCAAGATGCAAACAGTCATAACTATGAGTCAAATAGCAGGAGTGATAGGAATCAATCAAAATCCAATAATTCTAAATCTAAGAACAAAGATCCCGAAGCGCTCACTTTTTATAATAGTTCCATAAACAAGAGAGGCCAAGACCATCGTAATGGAAAAGGTGAAGGCTTGGGCAGGAACCGGAACTGGGCAGGGAGTCAGAGGATTAGAGCAGTGGATAGAAACTTCTCAGAGGATGAGCAGTATGCAAACAGCTATTTGCAGTACAAAGAGGAGAAAGCAGAGAGGCTGGCAAAACAAGAGCTTCCTAGTCCTAAATTCAGGAGCAAACAGACTGCAAATATAGTACACACTGAAATGACTCAGCGAGAGAGGCTGAGTGAGCAGCTAGACAAGGGCACGCTAGAGTGCCTGGTGTGCTGTGAGCGTGTCAAGCAGATTGACTCAGTGTGGTCCTGCGGCAACTGCTACCATGTGCTGCATCTGAGGTGCATTCGGAAGTGGGCTATGAGCAGTGTTGTTGAGGGCAAATGGCGCTGCCCCGCCTGCCAGAACACAAGTGAGGAGATTCCTACGGAGTACCGGTGCATGTGCGGTGCGGTCCGCTCCCCGGAGTACCAACGTGGTGGCAGCGGCGCTCATACATGTGGCAAGGCATGTAAGAGGCCTCGCGCGTGTCCACATCCTTGCACGCTGCTTTGCCATCCTGGGCCTTGCCCGCCGTGCCAGGCAACTGTCAGCAAAAAATGTGGTTGCGGAGCCGAGACGCGTTCCGTGCTATGCAGCAGCAAGTTGCCGCAAGTGTGCGGGCGCGTGTGCGGCAAGTCGCTGGACTGCGGCGCGCACGCGTGCCAGGCTGAGTGCCACGAGGGGGCTTGCCAGGACTGCGCTGAGACAGTCACTCAAGTGTGTTACTGCCCTGCAACCAAAAGCCGTTCGGTCGCTTGCACACGCGAGACCGGCAACGAAAAGCACTGGTCGTGTGGCGAGTCCTGTTCGCGCATATTGGCATGTGGCCACCACGTGTGCCAGGAGAACTGCCACGCGCCGCCCTGCTCGCCCTGCCGGCTGCTGCCGCAACTGGTCATCACCTGCCCATGTGGGAAGAAGAAGCTAGACAAGGACTCGCGCAAGTCGTGCACGGATCCGATCCCGCTGTGCGGCAACATCTGTGCAAAGCCGCTAGCTTGCGGCCCGGCCGGCGACAGGCATTTCTGCAAGTTGGACTGCCATGAAGGTGAATGCCCTATATGTCCTGACAAAACGTTAGTCCAATGCCGCTGCGGCCACTCCAGCCGCGAGGTGCCGTGCGCGGAACTGCCGCAAATGATCAACAACGTGCTGTGCCAGAAGAAATGTAATAAGAAATTATCCTGCGGCCGCCACCGCTGTCGCACTGTATGTTGTGCCGCGTCTTCCCACCGTTGCGCTGTCGTATGCGGCAGAACGCTGTCCTGCCAGCTGCATCGCTGCGAGGAGTTCTGCCACACGGGACACTGCGCACCCTGCCCGCGCGTCAGTTTCGAAGAGCTCCGCTGTACGTGCGGCGCCCAAGTTCTGCTTCCACCGGTCCGATGCGGGACCCGCCCGCCCGCCTGCGACGCGCCCTGCCGCCGCCGTCGTCCCTGCGACCACCCCCCGCACCACTCCTGCCACACCGGCGACTGCCCGCCCTGCGTCGTGCTCACCACCAAGCGCTGCCACGGCCGCCACGAGGAGCGTAAAACAATCCCGTGTTCCCAAGAGGAGTTCTCTTGCGGATTACCATGCGGCAAGCCGCTGCCGTGCGGGAAGCACACCTGCATCAAGACCTGCCACAAGGGCGAGTGCGACACCGGCAAATGCACGCAACCGTGCAACGAGAAGCGTCCGAGTTGCGGCCACCCGTGCGCGGCGCCGTGTCACTCGGCGACCGGCGCCGCCTGCCCCAGCGCCGCGCCCTGCCGCCGGCCCGTGCGCGCCGTCTGCGCCTGCGGCCGCCGCAGCGCCGAGCGCGCCTGCGCCGACAACGCGCGCGACTACACCCGGATGATGAGCGCGCTGGCAGCTAGTAAAATGCAGGAAGGTGGTTCAGTCGACTTATCCGACGTGCAACGTCCAGGATCCATGCTCAAAACACTAGAATGCGACGACGAGTGTCGAGTGGAGGCCCGCACACGACAAATGGCTTTGGCGCTACAAATCCGCAACCCGGACGTGTCCGCCAAGCTGGCGCCGCGCTACAGCGACAACCTGCGCGCCACCGCCATCAAGGAGCCCGCCTTCGCACAGCAGATACACGACAAGCTCACCGAGCTGGTGCACCTCGCCAAGAAGTCGAAGCAGAAGACGCGCGCGCACTCATTCCCGTCGATGAACTGGCAAAAGCGGCAGTTCATACACGAGCTGTGCGAACACTTCGGCTGCGAGAGCGTGGCCTACGACGCGGAGCCCAACCGGAACGTCGTCGCCACCGCTGATAAGGAAAAGTCGTGGTTGCCGGCGATGAGCGTGCTGGAGGTGGTGGCGCGCGAGGCGGGCAAGCGCCGCGTGCCGGGGCCAGTGCTGCGGCCCCCGCCCGCCGCGCCCGTCGCGCCCAGCGCCGCCAAGTGA
- Protein Sequence
- MSQWNNSYAYNNQYQNANTWNGDPNGQYANQGYYPPNPNRQYDSTNQQYVSFNEFLTQMQGNGASQPSGNNFSNSQFQNYDQYDYQNMPSTSQNAQESYYAGSSSNAESYSHSKYESQPQEQTSYSNDLILKSNLTATASEFVPKNSTVKPSTSAQNIPEVTNSTSSNNSGTEYKKSHGSSSETNWRERPQSSQQNGEIKNNSRYQDNNYKHQDNSNRNRDRDRDRNRYQDANSHNYESNSRSDRNQSKSNNSKSKNKDPEALTFYNSSINKRGQDHRNGKGEGLGRNRNWAGSQRIRAVDRNFSEDEQYANSYLQYKEEKAERLAKQELPSPKFRSKQTANIVHTEMTQRERLSEQLDKGTLECLVCCERVKQIDSVWSCGNCYHVLHLRCIRKWAMSSVVEGKWRCPACQNTSEEIPTEYRCMCGAVRSPEYQRGGSGAHTCGKACKRPRACPHPCTLLCHPGPCPPCQATVSKKCGCGAETRSVLCSSKLPQVCGRVCGKSLDCGAHACQAECHEGACQDCAETVTQVCYCPATKSRSVACTRETGNEKHWSCGESCSRILACGHHVCQENCHAPPCSPCRLLPQLVITCPCGKKKLDKDSRKSCTDPIPLCGNICAKPLACGPAGDRHFCKLDCHEGECPICPDKTLVQCRCGHSSREVPCAELPQMINNVLCQKKCNKKLSCGRHRCRTVCCAASSHRCAVVCGRTLSCQLHRCEEFCHTGHCAPCPRVSFEELRCTCGAQVLLPPVRCGTRPPACDAPCRRRRPCDHPPHHSCHTGDCPPCVVLTTKRCHGRHEERKTIPCSQEEFSCGLPCGKPLPCGKHTCIKTCHKGECDTGKCTQPCNEKRPSCGHPCAAPCHSATGAACPSAAPCRRPVRAVCACGRRSAERACADNARDYTRMMSALAASKMQEGGSVDLSDVQRPGSMLKTLECDDECRVEARTRQMALALQIRNPDVSAKLAPRYSDNLRATAIKEPAFAQQIHDKLTELVHLAKKSKQKTRAHSFPSMNWQKRQFIHELCEHFGCESVAYDAEPNRNVVATADKEKSWLPAMSVLEVVAREAGKRRVPGPVLRPPPAAPVAPSAAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00076134; iTF_01126036; iTF_01125122;
- 90% Identity
- -
- 80% Identity
- -