Basic Information

Insect: Ostrinia nubilalis
Gene Symbol: stc_1
Assembly: GCA_963855985.1
Location: OY979743.1:3454498-3473850[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2 3.5e+04 -4.2 1.6 15 19 409 413 408 413 0.81

2 14 0.062 1.1e+03 0.7 1.7 2 10 441 449 441 449 0.92

3 14 3.4e-05 0.6 11.1 18.1 4 19 457 472 455 472 0.93

4 14 0.077 1.4e+03 0.4 0.7 6 12 498 504 497 504 0.91

5 14 3.4e-08 0.0006 20.7 12.3 1 18 508 525 508 526 0.97

6 14 1.6e-05 0.28 12.2 10.9 1 19 567 585 567 585 0.98

7 14 2.8e-05 0.5 11.4 10.9 1 19 626 648 626 648 0.87

8 14 2 3.5e+04 -5.2 2.2 6 10 678 682 678 682 0.94

9 14 0.0031 54 4.9 7.4 1 11 688 698 688 699 0.95

10 14 0.036 6.3e+02 1.5 0.4 3 10 702 709 701 709 0.91

11 14 3.4e-06 0.06 14.3 14.0 3 19 717 733 715 733 0.92

12 14 0.00045 8 7.5 9.4 10 18 780 788 777 789 0.92

13 14 5.6e-08 0.00099 20.0 12.8 1 17 825 843 825 849 0.84

14 14 0.0011 19 6.3 13.2 1 19 855 872 855 878 0.81

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2	3.5e+04	-4.2	1.6	15	19	409	413	408	413	0.81
2	14	0.062	1.1e+03	0.7	1.7	2	10	441	449	441	449	0.92
3	14	3.4e-05	0.6	11.1	18.1	4	19	457	472	455	472	0.93
4	14	0.077	1.4e+03	0.4	0.7	6	12	498	504	497	504	0.91
5	14	3.4e-08	0.0006	20.7	12.3	1	18	508	525	508	526	0.97
6	14	1.6e-05	0.28	12.2	10.9	1	19	567	585	567	585	0.98
7	14	2.8e-05	0.5	11.4	10.9	1	19	626	648	626	648	0.87
8	14	2	3.5e+04	-5.2	2.2	6	10	678	682	678	682	0.94
9	14	0.0031	54	4.9	7.4	1	11	688	698	688	699	0.95
10	14	0.036	6.3e+02	1.5	0.4	3	10	702	709	701	709	0.91
11	14	3.4e-06	0.06	14.3	14.0	3	19	717	733	715	733	0.92
12	14	0.00045	8	7.5	9.4	10	18	780	788	777	789	0.92
13	14	5.6e-08	0.00099	20.0	12.8	1	17	825	843	825	849	0.84
14	14	0.0011	19	6.3	13.2	1	19	855	872	855	878	0.81

Sequence Information

Coding Sequence: ATGTCACAGTGGAACAATTCTTACGTGTACAACAACCAATACCAAGGTGAAAATACCTGGAACGGAGATCTGAATACTCAATATGCAAATCAAGGTTACTATCCCAATCCTAATCAACAATATGACTCCGCCAACCAACAGTATGTGAGCTTCAATGAGTTTATAAATCAAATGCAAAGCAATGGGGCGCCTCAACCTAGTGCTAATAACTACAATAATTCACAGTATCAGAATTATGGTCAATATGATTATCAAAATATGCCATCTACCTCCCAAAATTCACAAGTAGACAGTTATTATGCAGGTAACTCTTCAAATAGCCAGAATGGTGCAGAATCATACAATCAAAGTCAGTATGAGCAACAGCCACAAGAACAAGCTTCCTACTCAAATGAGTTAATACTCAAATCAAACTTAACTCCAACTGCTTCTGAATTTGTGCCAAAAAGTACTAAAGCAAAGCCTTCAAGAAGTGTTCAAAATGTCCCTGAAACGACCAACTCTAATAGTAGTAATAATGGTGCTACTGAGTATAAAAAGAGTCATGGAAGCTCTTCTGACACCAACTGGAGAGAGAGACCACAGTCATCTCAACAGAATGGTGAAACTAAACATAACAGTCGCTATCAAGACAACTATAGACATCAGGAGAATAGCAACAGAAACCGGGATCGCGACCGTGACAGGAACCGTTACCAAGACTCAAATAGTCACAACTATGAGTCAAACAATAGACCTGATAGGAATCAATCAAAGTCCAATGGTAAATCTAAAAAACAAGATGCTGATGGTCTTACTTTTTATAATAGTTCTATAAATAAGAGAGGGCAGGACCATCGTAATGGAAAAGGGGAAGGTTCCGGCAGGAACCGGAACTGGGCAGGAAGTCAGAGACTCCGAGCTGAAAGAAATTACACAGAGGATGAGCAGTATGCAAACAGTTATTTGCAATACAAAGAGGAGAAAGCAGAGAGGTTGGCAAAACAAGAAAATCCCAGTCCTAAATTCAGAAACAAACAAACTGCAGAGACagCACACACAGAAATGACCCAGCGGGAGAGACTGAGTGAGCAGCTGGACAAGGGCACTCTGGAGTGCCTGGTGTGCTGCGAGCGCGTCAAGCAGATCGACCCCGTGTGGTCCTGCGGCAATTGCTACCACGTACTCCATCTGCGGTGCATCCGAAAGTGGGCCATGAGCAGTGTTGTTgAGGGGAAATGGCGTTGCCCCGCCTGCCAGAACACAAGCGAAGAGATCCCCACCGAATACCGCTGCATGTGTGGCGCGACTCGCGCTCCTGAGTACCAGCGCGGTGGCAGCGGCGCTCACACTTGTGGCAAGTCCTGCAAGCGGCCTAGAGCCTGCCCGCATCCGTGTACCTTGCTGTGTCATCCCGGGCCGTGTCCGCCCTGTCAAGCCACTGTCAGCAAAAAATGCGGCTGCGGCGCCGAAACACGCTCCGTTCTATGCAGCAGCAAACTCCCGCAAGTGTGCGGGCGAACTTGCCACAAGACGCTGACCTGCGGCGCGCACGCCTGTCAAGCGCCGTGCCACGAGGGCGCATGCCAGGACTGCGAAGAGACTGTCACGCAAGtGTGCTACTGCCCCGCCGCGAAAAGCCGCTCGGTCCCGTGCACTCGCGAGACGGGCAGCCAGCAGCAGTGGTCGTGCGGCTCGGCGTGCGCGCGCGTGCTGGCGTGCGGCCGCCACGTGTGCACGCTGGCGTGCCACGCGCCGCCCTGCGCGCCCTGCCGCCTGCTGCCGCGCCTGGTGCTCACGTGTCCCTGCGGGAAGAACAAGTTAGACAAAGACTCGCGCAAGTCGTGCACGGACCCTATCCCGCTGTGCGGTGGCATCTGTGCCAAGCCGCTGCCTTGTGGACCAGCTGGAGATAAGCACTTCTGCAAGCTGGACTGCCATGAAGGCGAATGTCCCGTGTGTCCCGACAAGACATTAGTCCAATGTCGCTGCGGGCACTCCAGCCGCGAGGTGCCTTGCGCGGAGCTATCGCAGATGATCAACAACGTGCTGTGCCAGAAGAAGTGTAATAAGAAGCTGTCGTGCGGCCGGCACCGCTGCCGCACCGTGTGTTGCGCGGCGTCGTCGCACCGCTGCGCCGTGGTGTGCGCGCGCACGCTGTCGTGCCAGCTGCACCGCTGCGAGGAGTTCTGCCACACCGGACACTGTGCGCCGTGCCCGCGCGTCAGTTTCGAGGAGCTCCGTTGCACCTGCGGCGCGCAAGTCTTACTCCCACCAGTACGCTGTGGCGCGCGGCCACCAGCCTGCGACGCgccgtgccgccgccgccgcgcctgccTGCACCCGCCGCACCACTCGTGCCACACCGGCGACTGCCCGCCCTGCGTCGTGCTCACCACCAAGCGCTGCCACGGCCAGCACGAGGAGCGAAAAACGATACCATGCTCGCAAGACGAATTCTCGTGTGGGCTGCCGTGCGGCAAGCCGCTACCTTGCGGGAAGCACACCTGCATCAAGACCTGCCACAAGGGAGAATGCGACACTAGCAAATGCACTCAGCCGTGCAACGAGAAGCGCCCCAGCTGCGGGCACCCGTGCGCCGCGCCCTGCCACTCGGGCACCGGCGCGCCCTGCCCCAGCGCCGCGCCCTGCCGCCGCCCCGTGCGCGCCACCTGCGCCTGCGGCCGCCGCTCCGCCGACCGCGCCTGCGCCGACAACGCGCGCGACTACAACAAGATGATGAGCGCGCTGGCCGCGACTAAAATGCAAGAAGGCGGTTCCGTCGATTTATCCGACGTACAACGTCCAGGCTCCATGCTCAAAACCTTGGATTGCGACGACGAGTGCCGCGTGGAGGCGCGCACGCGGCAGATGGCGCTGGCGCTGCAGATCCGCAACCCCGACGTGTCGGCCAAGCTGGCGCCGCGCTACAGCGACACGCTGCGGGCTACGGCTGCCCGCGAGCCTGCCTTCGCGCAGCAGATACATGACAAGCTTACGGAGCTCGTGCACCTCGCTAAGAAGTCGAAGCAGAAGACGCGCGCGCACTCGTTCCCATCAATGAACTGGCAGAAGCGGCAGTTCATCCACGAGCTGTGCGAGCACTTCGGCTGCGAGAGCGTGGCCTACGATGCCGAGCCCAACCGCAACGTCGTCGCCACCGCCGACCGCGAGAAGTCGTGGCTGCCCGCGATGAGCATACTGGAAGTCGTGCAACGTGAGGCCGGCAAGCGCAAGGTGCCCGGGCCCGTGCTGCGCCCGCCCGCCgcctccagcgccgccgccgccgccgccggcaaCAAACCGTCCGGCTGGGCAACGCTGACGTCCACGAACGCGTGGGCCGCGCGTAGTCAGCCCAAGCCgcagccgcagccgccgccgcaggACAAGCTGGACTACTTCGACTACCCGCCGGACAACTAG
Protein Sequence: MSQWNNSYVYNNQYQGENTWNGDLNTQYANQGYYPNPNQQYDSANQQYVSFNEFINQMQSNGAPQPSANNYNNSQYQNYGQYDYQNMPSTSQNSQVDSYYAGNSSNSQNGAESYNQSQYEQQPQEQASYSNELILKSNLTPTASEFVPKSTKAKPSRSVQNVPETTNSNSSNNGATEYKKSHGSSSDTNWRERPQSSQQNGETKHNSRYQDNYRHQENSNRNRDRDRDRNRYQDSNSHNYESNNRPDRNQSKSNGKSKKQDADGLTFYNSSINKRGQDHRNGKGEGSGRNRNWAGSQRLRAERNYTEDEQYANSYLQYKEEKAERLAKQENPSPKFRNKQTAETAHTEMTQRERLSEQLDKGTLECLVCCERVKQIDPVWSCGNCYHVLHLRCIRKWAMSSVVEGKWRCPACQNTSEEIPTEYRCMCGATRAPEYQRGGSGAHTCGKSCKRPRACPHPCTLLCHPGPCPPCQATVSKKCGCGAETRSVLCSSKLPQVCGRTCHKTLTCGAHACQAPCHEGACQDCEETVTQVCYCPAAKSRSVPCTRETGSQQQWSCGSACARVLACGRHVCTLACHAPPCAPCRLLPRLVLTCPCGKNKLDKDSRKSCTDPIPLCGGICAKPLPCGPAGDKHFCKLDCHEGECPVCPDKTLVQCRCGHSSREVPCAELSQMINNVLCQKKCNKKLSCGRHRCRTVCCAASSHRCAVVCARTLSCQLHRCEEFCHTGHCAPCPRVSFEELRCTCGAQVLLPPVRCGARPPACDAPCRRRRACLHPPHHSCHTGDCPPCVVLTTKRCHGQHEERKTIPCSQDEFSCGLPCGKPLPCGKHTCIKTCHKGECDTSKCTQPCNEKRPSCGHPCAAPCHSGTGAPCPSAAPCRRPVRATCACGRRSADRACADNARDYNKMMSALAATKMQEGGSVDLSDVQRPGSMLKTLDCDDECRVEARTRQMALALQIRNPDVSAKLAPRYSDTLRATAAREPAFAQQIHDKLTELVHLAKKSKQKTRAHSFPSMNWQKRQFIHELCEHFGCESVAYDAEPNRNVVATADREKSWLPAMSILEVVQREAGKRKVPGPVLRPPAASSAAAAAAGNKPSGWATLTSTNAWAARSQPKPQPQPPPQDKLDYFDYPPDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01281903;
90% Identity: -
80% Identity: -