Ofur000341.1
Basic Information
- Insect
- Ostrinia furnacalis
- Gene Symbol
- stc
- Assembly
- GCA_004193835.1
- Location
- NW:310757-347550[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 2 1.5e+04 -4.4 1.6 15 19 409 413 408 413 0.81 2 18 0.054 4e+02 0.9 1.4 2 10 441 449 441 449 0.92 3 18 4.1e-05 0.31 10.9 18.1 4 19 457 472 455 472 0.93 4 18 0.091 6.9e+02 0.2 0.7 6 12 498 504 497 504 0.91 5 18 4e-08 0.0003 20.5 12.3 1 18 508 525 508 526 0.97 6 18 1.9e-05 0.14 12.0 10.9 1 19 567 585 567 585 0.98 7 18 3.3e-05 0.25 11.2 10.9 1 19 626 648 626 648 0.87 8 18 2 1.5e+04 -5.4 2.2 6 10 678 682 678 682 0.94 9 18 0.0036 27 4.7 7.4 1 11 688 698 688 699 0.95 10 18 0.042 3.2e+02 1.2 0.4 3 10 702 709 701 709 0.91 11 18 4.1e-06 0.031 14.1 14.0 3 19 717 733 715 733 0.92 12 18 0.00053 4 7.3 9.4 10 18 780 788 777 789 0.92 13 18 0.00053 4 7.3 9.4 10 18 829 837 826 838 0.92 14 18 0.00053 4 7.3 9.4 10 18 878 886 875 887 0.92 15 18 0.00053 4 7.3 9.4 10 18 927 935 924 936 0.92 16 18 0.00053 4 7.3 9.4 10 18 976 984 973 985 0.92 17 18 5.5e-08 0.00041 20.1 12.5 1 17 1021 1039 1021 1045 0.84 18 18 0.0013 9.6 6.1 13.2 1 19 1051 1068 1051 1074 0.81
Sequence Information
- Coding Sequence
- atgtcACAGTGGAACAATTCTTACGTGTACAACAACCAATACCAAGGTGAAAATACCTGGAACGGAGATCTGAATACTCAATATGCAAATCAAGGTTACTATCCCAATCCTAATCAACAATATGACTCCGCCAACCAACAGTATGTGAGCTTCAATGAGTTTATAAATCAAATGCAAGGCAATGGGGCGCCTCAACCTAGTGCTAATAACTACAATAGTTCACAGTATCAGAATTATGGTCAATATGATTATCAAAATATGCCATCTACCTCCCAAAATTCACAAGTAGACAGTTATTATGCAGGTAACTCTTCAAATAGCCAGAATGGTGCAGAATCATACAATCAAAGTCAGTATGAGCAACAGCCACAAGAACAAGCTTCTTATTCAAATGAGTTAATACTCAAATCAAACTTAACTCCAACTGCTTCTGAATTTGTGCCAAAAAGTACTAAAGCAAAGCCTTCAAGAAGTGTTCAAAATGTCCCTGAAACGACCAACTCTAATAGTAGTAATAATGGTGCTACTGAGTATAAAAAGAGTCATGGAAGCTCTTCTGACACCAACTGGAGAGAGAGACCACAGTCATCTCAACAGAATGGTGAAACTAAACATAACAGTCGCTATCAAGACAACTATAGACATCAGGAGAATAGCAACAGAAACCGGGATCGCGACCGTGACAGGAACCGTTACCAAGACTCAAATAGTCACAACTATGAGTCAAACAATAGACCTGATAGGAATCAATCAAAGTCCAATGGTAAATCTAAAAAACAAGATGCTGATGGTCTTACTTTTTATAATAGTTCTATAAATAAGAGAGGGCAGGACCATCGTAATGGAAAAGGGGAAGGTTCCGGCAGGAACCGGAACTGGGCAGGAAGTCAAAGACTCCGAGCTGAAAGAAATTACACAGAGGATGAGCAGTATGCAAACAGTTATTTGCAATACAAAGAGGAGAAAGCAGAGAGGTTGGCAAAACAAGACAATCCCAGTCCTAAATTCAGAAACAAACAAACTGCAGAGACagCACACACAGAAATGACCCAGCGGGAGAGACTGAGCGAGCAGTTGGACAAGGGCACTCTGGAGTGCCTGGTGTGCTGCGAGCGCGTCAAGCAGATCGACCCCGTGTGGTCCTGCGGCAATTGCTACCACGTACTCCATCTGCGGTGCATCCGGAAGTGGGCCATGAGCAGTGTTGTTGAGGGCAAATGGCGTTGCCCCGCCTGCCAGAATACAAGCGAAGAGATCCCCACCGAATACCGCTGCATGTGTGGCGCGACTCGCGCTCCTGAGTACCAACGCGGTGGCAGCGGCGCTCACACTTGTGGCAAGGCCTGCAAGCGGCCTAGAGCCTGCCCGCATCCGTGTACCTTGCTGTGTCATCCCGGGCCTTGTCCGCCTTGTCAAGCCACCGTCAGCAAAAAATGCGGCTGCGGTGCCGAAACACGCTCCGTTCTATGCAGCAGCAAGCTACCGCAAGTTTGCGGGCGAACTTGCCACAAGACGCTGACCTGCGGCGCGCACGCCTGTCAGGCGCCGTGCCACGAGGGCGCCTGCCAAGACTGCGAAGAGACTGTCACGCAAGTGTGCTACTGCCCCGCCGCAAAAAGCCGTTCGGTGCCGTGCACTCGCGAGACGGGCAGCCAGCAGCAGTGGTCGTGCGGCTCGGCGTGCGCGCGCGTGCTGGCGTGCGGCCGCCACGTGTGCACGCTGGCGTGCCACGCGCCGCCCTGCGCGCCCTGCCGCCTGCTGCCGCGCCTCGTGCTCACGTGTCCCTGCGGGAAGAACAAGTTAGACAAAGACTCGCGCAAGTCGTGCACGGACCCAATCCCGCTGTGCGGCGGCATCTGCGCCAAGCCGCTGCCGTGTGGACCCGCTGGAGATAAGCACTTCTGCAAGCTGGACTGCCATGAAGGCGAATGTCCCGTGTGCCCCGACAAGACGTTAGTCCAATGTCGCTGTGGGCACTCCAGCCGCGAGGTGCCTTGCGCGGAACTCCCGCAGATGATCAACAACGTGCTGTGCCAGAAGAAGTGTAATAAGAAGCTGTCGTGCGGCCGGCACCGCTGCCGCACCGTGTGTTGCGCGGCGTCGTCGCACCGCTGCGCCGTGGTGTGCGCGCGCACGCTGTCGTGCCAGCTGCACCGCTGCGAGGAGTTCTGCCACACCGGACACTGTGCGCCGTGCCCGCGCGTCAGTTTCGAGGAGCTCCGCTGCACCTGCGGCGCGCAAGTCTTACTCCCACCAGTACGCTGTGGCGCGCGGCCACCAGCCTGCGACGCgccgtgccgccgccgccgcgcctgcCTGCACCCGCCGCACCACTCGTGCCACACCGGCGACTGCCCGCCCTGCGTCGTGCTCACCACCAAGCGCTGCCACGGCCAGCACGAGGTGACTGGTCGTCAGTACACCAGGTCACTAGGCTTCGAGGAGCTCCTGCGACGCGCCTGCCTGCACCCGCCGCACCACTCGTGCCACACCGGCGACTGCCCGCCCTGCGTCGTGCTCACCACCAAGCGCTGCCACGGCCAGCACGAGGTGACTGGTCGTCAGTACACCAGGTCACTAGGCTTCGAGGAGCTCCTGCGACGCGCCTGCCTGCACCCGCCGCACCACTCGTGCCACACCGGCGACTGCCCGCCCTGCGTCGTGCTCACCACCAAGCGCTGCCACGGCCAGCACGAGGTGACTGGTCGTCAGTACACCAGGTCACTAGGCTTCGAGGAGCTCCTGCGACGCGCCTGCCTGCACCCGCCGCACCACTCGTGCCACACCGGCGACTGCCCGCCCTGCGTCGTGCTCACCACCAAGCGCTGCCACGGCCAGCACGAGGTGACTGGTCGTCAGTACACCAGGTCACTAGGCTTCGAGGAGCTCCTGCGACGCGCCTGCCTGCACCCGCCGCACCACTCGTGCCACACCGGCGACTGCCCGCCCTGCGTCGTGCTCACCACCAAGCGCTGCCACGGCCAGCACGAGGAGCGAAAAACGATACCATGCTCGCAAGATGAGTTCTCGTGTGGGCTGCCGTGCGGCAAGCCGCTACCTTGCGGGAAGCACACCTGCATCAAGACCTGCCACAAGGGAGAATGCGACACTAGCAAATGCACTCAGCCGTGCAACGAGAAGCGCCCCAGCTGCGGGCACCCGTGCGCCGCGCCCTGCCACTCGGGCACCGGCGCGCCCTGCCCCAGCGCCGCGCCCTGCCGCCGCCCCGTGCGCGCCACCTGCGCCTGCGGCCGCCGCTCCGCCGACCGCGCCTGCGCCGACAACGCGCGCGACTACAACAAGATGATGAGCGCGCTGGCCGCGACTAAAATGCAAGAAGGCGGTTCCGTCGATTTATCCGACGTTCAACGTCCAGGCTCCATGCTCAAAACCTTGGATTGCGACGACGAGTGCCGCGTGGAGGCGCGCACGCGGCAGATGGCGCTGGCGCTGCAGATCCGCAACCCCGACGTGTCGGCCAAGCTCGCGCCGCGCTACAGCGACACGCTGCGGGCTACGGCTGCCCGCGAGCCTGCGTTCGCGCAGCAGATACATGATAAGCTTACGGAGCTCGTGCACCTTGCCAAGAAGTCGAAGCAGAAGACGCGCGCTCACTCGTTCCCATCAATGAACTGGCAGAAGCGGCAGTTCATCCACGAGCTGTGCGAGCACTTCGGCTGCGAGAGCGTGGCCTACGACGCCGAGCCCAACCGCAACGTCGTCGCCACCGCCGACCGCGAGAAGTCGTGGCTGCCCGCGATGAGCATACTGGAAGTCGTGCAACGTGAGGCCGGCAAGCGCAAGGTGCCCGGGCCCGTGCTGCGCCCGCCCGCcgcctccagcgccgccgccgccgccgccggcaaCAAACCGTCCGGCTGGGCAACGCTGACGTCCACGAACGCGTGGGCCGCGCGTAGTCAGCCCAagccgcagccgcagccgccgccgcaggACAAGCTGGACTACTTCGACTACCCGCCGGACAACTAG
- Protein Sequence
- MSQWNNSYVYNNQYQGENTWNGDLNTQYANQGYYPNPNQQYDSANQQYVSFNEFINQMQGNGAPQPSANNYNSSQYQNYGQYDYQNMPSTSQNSQVDSYYAGNSSNSQNGAESYNQSQYEQQPQEQASYSNELILKSNLTPTASEFVPKSTKAKPSRSVQNVPETTNSNSSNNGATEYKKSHGSSSDTNWRERPQSSQQNGETKHNSRYQDNYRHQENSNRNRDRDRDRNRYQDSNSHNYESNNRPDRNQSKSNGKSKKQDADGLTFYNSSINKRGQDHRNGKGEGSGRNRNWAGSQRLRAERNYTEDEQYANSYLQYKEEKAERLAKQDNPSPKFRNKQTAETAHTEMTQRERLSEQLDKGTLECLVCCERVKQIDPVWSCGNCYHVLHLRCIRKWAMSSVVEGKWRCPACQNTSEEIPTEYRCMCGATRAPEYQRGGSGAHTCGKACKRPRACPHPCTLLCHPGPCPPCQATVSKKCGCGAETRSVLCSSKLPQVCGRTCHKTLTCGAHACQAPCHEGACQDCEETVTQVCYCPAAKSRSVPCTRETGSQQQWSCGSACARVLACGRHVCTLACHAPPCAPCRLLPRLVLTCPCGKNKLDKDSRKSCTDPIPLCGGICAKPLPCGPAGDKHFCKLDCHEGECPVCPDKTLVQCRCGHSSREVPCAELPQMINNVLCQKKCNKKLSCGRHRCRTVCCAASSHRCAVVCARTLSCQLHRCEEFCHTGHCAPCPRVSFEELRCTCGAQVLLPPVRCGARPPACDAPCRRRRACLHPPHHSCHTGDCPPCVVLTTKRCHGQHEVTGRQYTRSLGFEELLRRACLHPPHHSCHTGDCPPCVVLTTKRCHGQHEVTGRQYTRSLGFEELLRRACLHPPHHSCHTGDCPPCVVLTTKRCHGQHEVTGRQYTRSLGFEELLRRACLHPPHHSCHTGDCPPCVVLTTKRCHGQHEVTGRQYTRSLGFEELLRRACLHPPHHSCHTGDCPPCVVLTTKRCHGQHEERKTIPCSQDEFSCGLPCGKPLPCGKHTCIKTCHKGECDTSKCTQPCNEKRPSCGHPCAAPCHSGTGAPCPSAAPCRRPVRATCACGRRSADRACADNARDYNKMMSALAATKMQEGGSVDLSDVQRPGSMLKTLDCDDECRVEARTRQMALALQIRNPDVSAKLAPRYSDTLRATAAREPAFAQQIHDKLTELVHLAKKSKQKTRAHSFPSMNWQKRQFIHELCEHFGCESVAYDAEPNRNVVATADREKSWLPAMSILEVVQREAGKRKVPGPVLRPPAASSAAAAAAGNKPSGWATLTSTNAWAARSQPKPQPQPPPQDKLDYFDYPPDN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01281903;
- 90% Identity
- -
- 80% Identity
- -