Pful018309.1
Basic Information
- Insect
- Pycnomerus fuliginosus
- Gene Symbol
- lrrfip2
- Assembly
- GCA_963924575.1
- Location
- OZ004621.1:70562-82856[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.3e-108 1.2e-103 347.4 29.6 1 300 54 343 54 343 0.94 2 2 0.055 9.4e+02 -0.2 5.2 120 170 341 391 341 417 0.73
Sequence Information
- Coding Sequence
- ATGTCGGACGATATGGAAATATCGGAAGAACCGAATAATAACGTGGTGTTGGTGGAAGGCGTGACAAAGTCGGAAACCTCCACGGACGTCGAGACGAAGAGGTTATGTACGGATCAGGAGAACGTTATCGAGAGTGTTTTGCAAAATGCCAACGATGAAGCCGAGGCACGTTTGTACGCCAAGAGACAGGCTAGGGCTGAAGCGAGGGACATTCGTATGCGCGAACTGGAGCGACAACAGAAGGAACAAGAGGAAAATGCTGACAGGCAGTTTGATATGTTGGCGGAACCGATGGCGAGGACCCCCATCAGGACCGCAGGAAACAGGTACCTCTCCAGCAGGAGGAGCTCCGAAGATTCGCTCGAGGACGGCGGAAGTCTGCGCGATTTACGGAGCGAACTGAAGGAAGTCGAGGACAAGTTCCGGAAGGCGATGATCGCCAACGCCCAACTCGACAACGATAAAACGTCCCTGACATATCAAATCGAACTGTTGAGAGACAGGATAGAGGAACTGGAAGAGGAGCATTCCCAGTTGAAGAGGGAGCACAGGGAAAAGTGCCGCGAACACGACCAATTGAAACGGTTATGTGCAAAATTAAAAGACGATTTGGCTGTGACCAGGAGCGAGCTGGAGGAGAGGGACAGGTTGATAACGGAAAAGGGTTTGGTAATCGTCGGGGAAGAACCGACGGACCTCGACGAGGAGTTGAGAAACGGTGACGTCACTAGCAGTATAGGCACCCCCAAGAAAGCTTTAGTTAGTATAGAAAATGCTCAGTTGCTGGAAAGTGCCGGGGAGGGGAGTTTAGACGTCCGACTGGCCAAATTCGCGAAAGAGAAAGTTGAACTTTCCGACCAAATCAGCCATTTAAAATTAGAATTGGAGGAGGAAAGAAGCAAAAGGAAGAAGTCGGTGTCGGGTACACTGAACGGACCTTCGGACGATCTAGACGAACATAAAGAAGCCAGCAAGCAATTGGGGGATTGGAAGTTCCGGGCTCAAAAGGCCGAACAAGACGTGGCAACGCTGCAAGCCACGGTGGCCAGGTTGGAAACTCAAGTCATTAGGTACAAAACGGCGGCGGAAGTATCCGAGAAATCCGAGGAAGCCCTAAAGGCCGAAAAGAGAAAACTGCAAAGAGAGgCGAGAGAGGCGACGAGTCGAGCGGAAGAACTAGAAACATCTAATACACACCTCCTGAAAAGATTAGACAAGTTAAAAAATGCGAAATCGACCCTCCTGAAAGAACTTTGA
- Protein Sequence
- MSDDMEISEEPNNNVVLVEGVTKSETSTDVETKRLCTDQENVIESVLQNANDEAEARLYAKRQARAEARDIRMRELERQQKEQEENADRQFDMLAEPMARTPIRTAGNRYLSSRRSSEDSLEDGGSLRDLRSELKEVEDKFRKAMIANAQLDNDKTSLTYQIELLRDRIEELEEEHSQLKREHREKCREHDQLKRLCAKLKDDLAVTRSELEERDRLITEKGLVIVGEEPTDLDEELRNGDVTSSIGTPKKALVSIENAQLLESAGEGSLDVRLAKFAKEKVELSDQISHLKLELEEERSKRKKSVSGTLNGPSDDLDEHKEASKQLGDWKFRAQKAEQDVATLQATVARLETQVIRYKTAAEVSEKSEEALKAEKRKLQREAREATSRAEELETSNTHLLKRLDKLKNAKSTLLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01329811;
- 90% Identity
- -
- 80% Identity
- -