Pcon002585.1
Basic Information
- Insect
- Ptychoptera contaminata
- Gene Symbol
- sip1
- Assembly
- GCA_963942525.1
- Location
- OZ012636.1:16409440-16412019[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.1e-92 3.5e-88 295.7 11.8 1 275 395 661 395 661 0.98 2 2 0.008 67 2.8 0.0 245 270 676 701 667 706 0.86
Sequence Information
- Coding Sequence
- atgtCTGATAATGAATATGAACGTTTTGAAATTACTGACTATGATTTAGATAATGAATTCAATCCAAATCGTAATAGACGACGTCCaacaaaaaaccaacaaatttATGgaATATGGGCCGATAGTGACAGTGACAATgataatttagataattttactTCTAAGAGCAGACGAGGCGGCAAAAAATCTAAAGATTATACTGCACCTGTAAATTTTGTTGCTGGAGGGGTCCAACAGTACggtaaaaaagatgaaaagaaATCTAAACCTAGTACTGAATTATCTGATGAAGATGAAGAATTTAGACCTAGATTTGGTGCAAATGAAGTTGATGGTACTAATTCTAGTGAATCTGAAAGTGAAGTAGAAGCCAACCCAAAAATATCATCTACGGCTGGATTTCGGCAAATgccaaataagaataaattgtCAGGTAATCTGGGAACATGGGAAGCACACACAAAAGGTATAGGTGCAAAATTACTGCTTCAAATGGGTTACAAGCCTGGCAAAGGGCTTGGCAAATCATTGCAAGGTATTGCAACACCTGTTCAAGCTGCTGTCAGAAAAGGTAGGGGTGCTATCGGTGCATACGGTCCTGAGTTAAAACAAACACTTGCTGATCAAAAAGGAAGCGCCAAAAAAATTGACGAAGatgaaaaagaaacattagaatttaaagaaaaactgcaACAGTTTCGTGGTGAATCATATAGTAGCTCCAAAGGTAAAAAACAACggtattataaaagtattcaaGATGTCATTGAAAAAGGGAAAAAGCCTGGCTATGTTTTTCAAGAAAGAGCAAATAGTAAATTAGCTAATGTTACTGTCATTGATATGACCGGTCCAGAGAAACGTGTTCTTAGTGGCTATCATGCTTTAGGTCAGACAAAAATTGCTGATGAATCTTTATACGAACACCGGCCAACGAAAAAGTGTACAAACTTTGCATTACCAGAATTAATGCacaatttgaatttaattgttgATATGTGTGAACaagaaatcattttaatagaCAAAACCCAACGAGCAAACAAAGATCGACAAGTTGTTCTTGAACAAGAGAAagataacttttgtaaagttgtCGAGTTGGAAAAGAACCACATTCTTACATTAGAATTAGCTTTAGAGTTAGTGAATAAATTGACAAGCACAGTCAATCCTATTGAATTAGAGAAAGCGgaagatatttttattgaattacaaGCCAATTATCCAGGTGAATATAAGGAATTTGGCTTGGGTGATTTAGCACCAGGTATAATTGCACCactatttaatgcaaaattattagaaTGGAATGCTTTGCAAGAGCCAACGAGACATGttgagttattaaaaaaatggaaaactaTATTAGGAATGAACCAGTCGTCAAcagttaatatttttgatcCATATTCAGCACTTGTTTGGTTAGGAATTATACCTAGCTTTCGTCGTGCAGCAGCATTATGGGATCCAAGATCTCATCAATCAATGGCTGCCTTATTGGATACATGGGCGCCTCTGTTACCAAATAATGTTTTGGACAATGTACTTGAACAGATAATTTTGCCACGAATTCATACTAGTGTTATTGAATGGGACCCGCTGACAGACACTATACCAATTCATGTATGGATCCACCCATGGAAAGGTTTACTGGATCACAAATTAGATgaaACTGTATATCCTCTAATAAGAGATAAATTAGGACACGCATTAAAAACTTGGACACCGTCCGATCGGTCAGCTCGCGCTATGATTACTCCCTGGAGAAATGTATTTGCTAATGGAGATATGCAAGCTTTTCTTATAAAGCATGTTATCCCGAAATTACAAATGACATTAtcagaattaattataaatccaTTACAACAGGATTTAGAATTGTGGAATCAAGTTTGGGAATGGCATGAAGTGATACCAGTTTTAAATATGACACAATTATTAGATAAGTTTTTCTTCCCAAAATGGATTCAAACATTAGTTATTTGGTTAAATCAAGCACCTAACTTTGATCAAGTATCACGATGGTATGCCGGATGGAAAGGTTTATTTTCGGATGAAATATTACAACAAGTTACAATAAAAGAACACTTTAGACGCGCATTAGAATTAATGCATCGTTCTACTGGTGCAGTGGCTATTTTAGCTGTCGATACACAAACTGTAGTTCTAACACCACAAGCCTCAAGTATGCTCGATATGCAAATGCAAGCCCTACCAACATTAGAATTTAAGGAACTTGTTTCACAAAAGTGTGCAGAGCGTGGTATTATATTTGCCCCCATGCCAGGACGACGAGAAACCGGTAAACAAGTATATCGtgttggaaaattattttgttacatcGATCGTTCAGTTATTATGCTAAGTGACGGCAGTTTATCTAATTGGCAACCAGTACCATTGACGTTGTTATTAGAAAAAGCAATAACtggttaa
- Protein Sequence
- MSDNEYERFEITDYDLDNEFNPNRNRRRPTKNQQIYGIWADSDSDNDNLDNFTSKSRRGGKKSKDYTAPVNFVAGGVQQYGKKDEKKSKPSTELSDEDEEFRPRFGANEVDGTNSSESESEVEANPKISSTAGFRQMPNKNKLSGNLGTWEAHTKGIGAKLLLQMGYKPGKGLGKSLQGIATPVQAAVRKGRGAIGAYGPELKQTLADQKGSAKKIDEDEKETLEFKEKLQQFRGESYSSSKGKKQRYYKSIQDVIEKGKKPGYVFQERANSKLANVTVIDMTGPEKRVLSGYHALGQTKIADESLYEHRPTKKCTNFALPELMHNLNLIVDMCEQEIILIDKTQRANKDRQVVLEQEKDNFCKVVELEKNHILTLELALELVNKLTSTVNPIELEKAEDIFIELQANYPGEYKEFGLGDLAPGIIAPLFNAKLLEWNALQEPTRHVELLKKWKTILGMNQSSTVNIFDPYSALVWLGIIPSFRRAAALWDPRSHQSMAALLDTWAPLLPNNVLDNVLEQIILPRIHTSVIEWDPLTDTIPIHVWIHPWKGLLDHKLDETVYPLIRDKLGHALKTWTPSDRSARAMITPWRNVFANGDMQAFLIKHVIPKLQMTLSELIINPLQQDLELWNQVWEWHEVIPVLNMTQLLDKFFFPKWIQTLVIWLNQAPNFDQVSRWYAGWKGLFSDEILQQVTIKEHFRRALELMHRSTGAVAILAVDTQTVVLTPQASSMLDMQMQALPTLEFKELVSQKCAERGIIFAPMPGRRETGKQVYRVGKLFCYIDRSVIMLSDGSLSNWQPVPLTLLLEKAITG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01276258;
- 90% Identity
- iTF_01276258;
- 80% Identity
- -