Pnig007528.1
Basic Information
- Insect
- Pterostichus niger
- Gene Symbol
- -
- Assembly
- GCA_947425015.1
- Location
- OX380348.1:22455001-22469362[-]
Transcription Factor Domain
- TF Family
- TSC22
- Domain
- TSC22 domain
- PFAM
- PF01166
- TF Group
- Basic Domians group
- Description
- These proteins are highly similar in a region of about 50 residues that include a conserved leucine-zipper domain most probably involved in homo- or hetero-dimerisation. Drosophila protein bunched [1] (gene bun) (also known as shortsighted), a probable transcription factor required for peripheral nervous system morphogenesis, eye development and oogenesis.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 0.0013 24 6.7 1.2 19 45 71 97 67 104 0.89 2 8 0.00041 7.4 8.3 0.6 18 45 135 162 133 169 0.90 3 8 0.00041 7.4 8.3 0.6 18 45 200 227 198 234 0.90 4 8 0.00041 7.4 8.3 0.6 18 45 265 292 263 299 0.90 5 8 0.00041 7.4 8.3 0.6 18 45 330 357 328 364 0.90 6 8 0.00041 7.4 8.3 0.6 18 45 393 420 391 427 0.90 7 8 0.00041 7.4 8.3 0.6 18 45 456 483 454 490 0.90 8 8 0.00041 7.4 8.3 0.6 18 45 521 548 519 555 0.90
Sequence Information
- Coding Sequence
- ATGATGGCATATAATGTTTATAAACAAAATCTTAAAACTGGTGAAAATTCTAAATCTCAATGTGTGAAAGTGACTGCAACACAAGTAGATATTGGTCAGTCCACTGTATGGAAGATTGTTGGAGAAATTGATAAAGATGGAACTGTAAAATCGCCAAATAAGAAACGAAATCGTAAATCATTGTACGGTGATTTGAACGAAGATCGGCTTTTAAATGAAGTAATTATGAAACTCCAACAGGAGTTGGAAAAATTAAAGAATGAAAATCAAGCACTGTTGCAGCAGATATCTGCAACACCGCCAAACAATACCACTGTAAATAGAACTAACGTGGCTCAACATACCACGAGAGGGCGAGGTGGACGTGGACGTGGACATGGACGTCGTCGCAGACGCCACCATGTATTAAATGAAGTAATTATGAAACTCCAACAGGAGTTGGAAAAATTAAAGAATGAAAATCAAGCACTGTTGCAGCAGATATCTGCAACACCGCCAAACAATACCACTGTAAATAGAACTAACGTGGCTCAACATACCACGAGAGGGCGAGGTGGACGTGGACGTGGACATGGACGTCGTCGCAGACGCCACCATGTATTAAATGAAGTAATTATGAAACTCCAACAGGAGTTGGAAAAATTAAAGAATGAAAATCAAGCACTGTTGCAGCAGATATCTGCAACACCGCCAAACAATACCACTGTAAATAGAACTAACGTGGCTCAACATACCACGAGAGGGCGAGGTGGACGTGGACGTGGACATGGACGTCGTCGCAGACGCCACCATGTATTAAATGAAGTAATTATGAAACTCCAACAGGAGTTGGAAAAATTAAAGAATGAAAATCAAGCACTGTTGCAGCAGATATCTGCAACACCGCCAAACAATACCACTGTAAATAGAACTAACGTGGCTCAACATACCACGAGAGGGCGAGGTGGACGTGGACGTGGACATGGACGTCGTCGCAGACGCCACCATGTATTAAATGAAGTAATTATGAAACTCCAACAGGAGTTGGAAAAATTAAAGAATGAAAATCAAGCACTGTTGCAACAGATATCTGCAACACCGCCAAACAATACCACTGTAAATAGAACTAACGTGGCTCAACATACCACGAGAGGGCGAGGTGGACGTGGACATGGACGTCGTCGCAGACGCCACCATGTATTAAATGAAGTAATTATGAAACTCCAACAGGAGTTGGAAAAATTAAAGAATGAAAATCAAGCACTGTTGCAACAGATATCTGCAACACCGCCAAACAATACCACTGTAAATAGAACTAACGTGGCTCAACATACCACGAGAGGGCGAGGTGGACGTGGACATGGACGTCGTCGCAGACGCCACCATGTATTAAATGAAGTAATTATGAAACTCCAACAGGAGTTGGAAAAATTAAAGAATGAAAATCAAGCACTGTTGCAGCAGATATCTGCAACACCGCCAAACAATACCACTGTAAATAGAACTAACGTGGCTCAACATACCACGAGAGGGCGAGGTGGACGTGGACGTGGACATGGACGTCGTCGCAGACGCCACCATGTATTAAATGAAGTAATTATGAAACTCCAACAGGAGTTGGAAAAATTAAAGAATGAAAATCAAGCACTGTTGCAGCAGATATCTGCAACACCGCCAAACAATACCACTGTAAATAGAACTAACGTGGCTCAACATACCACGAGAGGGCGAGGTGGACGTGGACGTGGACATGGACGTCGTCGCAGACGCCACCAT
- Protein Sequence
- MMAYNVYKQNLKTGENSKSQCVKVTATQVDIGQSTVWKIVGEIDKDGTVKSPNKKRNRKSLYGDLNEDRLLNEVIMKLQQELEKLKNENQALLQQISATPPNNTTVNRTNVAQHTTRGRGGRGRGHGRRRRRHHVLNEVIMKLQQELEKLKNENQALLQQISATPPNNTTVNRTNVAQHTTRGRGGRGRGHGRRRRRHHVLNEVIMKLQQELEKLKNENQALLQQISATPPNNTTVNRTNVAQHTTRGRGGRGRGHGRRRRRHHVLNEVIMKLQQELEKLKNENQALLQQISATPPNNTTVNRTNVAQHTTRGRGGRGRGHGRRRRRHHVLNEVIMKLQQELEKLKNENQALLQQISATPPNNTTVNRTNVAQHTTRGRGGRGHGRRRRRHHVLNEVIMKLQQELEKLKNENQALLQQISATPPNNTTVNRTNVAQHTTRGRGGRGHGRRRRRHHVLNEVIMKLQQELEKLKNENQALLQQISATPPNNTTVNRTNVAQHTTRGRGGRGRGHGRRRRRHHVLNEVIMKLQQELEKLKNENQALLQQISATPPNNTTVNRTNVAQHTTRGRGGRGRGHGRRRRRHH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01275002;
- 90% Identity
- iTF_01275002;
- 80% Identity
- iTF_01275002;