Pnig007528.1
Basic Information
- Insect
- Pterostichus niger
- Gene Symbol
- -
- Assembly
- GCA_947425015.1
- Location
- OX380348.1:22455001-22469362[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 0.00075 1.9 10.1 2.7 27 48 75 96 53 99 0.75 2 8 0.00012 0.31 12.6 1.0 27 48 140 161 126 168 0.54 3 8 0.00012 0.31 12.6 1.0 27 48 205 226 191 233 0.54 4 8 0.00012 0.31 12.6 1.0 27 48 270 291 256 298 0.54 5 8 0.00012 0.31 12.6 1.0 27 48 335 356 321 363 0.54 6 8 0.00012 0.31 12.6 1.0 27 48 398 419 384 426 0.54 7 8 0.00012 0.31 12.6 1.0 27 48 461 482 447 489 0.54 8 8 0.00012 0.31 12.6 1.0 27 48 526 547 512 554 0.54
Sequence Information
- Coding Sequence
- ATGATGGCATATAATGTTTATAAACAAAATCTTAAAACTGGTGAAAATTCTAAATCTCAATGTGTGAAAGTGACTGCAACACAAGTAGATATTGGTCAGTCCACTGTATGGAAGATTGTTGGAGAAATTGATAAAGATGGAACTGTAAAATCGCCAAATAAGAAACGAAATCGTAAATCATTGTACGGTGATTTGAACGAAGATCGGCTTTTAAATGAAGTAATTATGAAACTCCAACAGGAGTTGGAAAAATTAAAGAATGAAAATCAAGCACTGTTGCAGCAGATATCTGCAACACCGCCAAACAATACCACTGTAAATAGAACTAACGTGGCTCAACATACCACGAGAGGGCGAGGTGGACGTGGACGTGGACATGGACGTCGTCGCAGACGCCACCATGTATTAAATGAAGTAATTATGAAACTCCAACAGGAGTTGGAAAAATTAAAGAATGAAAATCAAGCACTGTTGCAGCAGATATCTGCAACACCGCCAAACAATACCACTGTAAATAGAACTAACGTGGCTCAACATACCACGAGAGGGCGAGGTGGACGTGGACGTGGACATGGACGTCGTCGCAGACGCCACCATGTATTAAATGAAGTAATTATGAAACTCCAACAGGAGTTGGAAAAATTAAAGAATGAAAATCAAGCACTGTTGCAGCAGATATCTGCAACACCGCCAAACAATACCACTGTAAATAGAACTAACGTGGCTCAACATACCACGAGAGGGCGAGGTGGACGTGGACGTGGACATGGACGTCGTCGCAGACGCCACCATGTATTAAATGAAGTAATTATGAAACTCCAACAGGAGTTGGAAAAATTAAAGAATGAAAATCAAGCACTGTTGCAGCAGATATCTGCAACACCGCCAAACAATACCACTGTAAATAGAACTAACGTGGCTCAACATACCACGAGAGGGCGAGGTGGACGTGGACGTGGACATGGACGTCGTCGCAGACGCCACCATGTATTAAATGAAGTAATTATGAAACTCCAACAGGAGTTGGAAAAATTAAAGAATGAAAATCAAGCACTGTTGCAACAGATATCTGCAACACCGCCAAACAATACCACTGTAAATAGAACTAACGTGGCTCAACATACCACGAGAGGGCGAGGTGGACGTGGACATGGACGTCGTCGCAGACGCCACCATGTATTAAATGAAGTAATTATGAAACTCCAACAGGAGTTGGAAAAATTAAAGAATGAAAATCAAGCACTGTTGCAACAGATATCTGCAACACCGCCAAACAATACCACTGTAAATAGAACTAACGTGGCTCAACATACCACGAGAGGGCGAGGTGGACGTGGACATGGACGTCGTCGCAGACGCCACCATGTATTAAATGAAGTAATTATGAAACTCCAACAGGAGTTGGAAAAATTAAAGAATGAAAATCAAGCACTGTTGCAGCAGATATCTGCAACACCGCCAAACAATACCACTGTAAATAGAACTAACGTGGCTCAACATACCACGAGAGGGCGAGGTGGACGTGGACGTGGACATGGACGTCGTCGCAGACGCCACCATGTATTAAATGAAGTAATTATGAAACTCCAACAGGAGTTGGAAAAATTAAAGAATGAAAATCAAGCACTGTTGCAGCAGATATCTGCAACACCGCCAAACAATACCACTGTAAATAGAACTAACGTGGCTCAACATACCACGAGAGGGCGAGGTGGACGTGGACGTGGACATGGACGTCGTCGCAGACGCCACCAT
- Protein Sequence
- MMAYNVYKQNLKTGENSKSQCVKVTATQVDIGQSTVWKIVGEIDKDGTVKSPNKKRNRKSLYGDLNEDRLLNEVIMKLQQELEKLKNENQALLQQISATPPNNTTVNRTNVAQHTTRGRGGRGRGHGRRRRRHHVLNEVIMKLQQELEKLKNENQALLQQISATPPNNTTVNRTNVAQHTTRGRGGRGRGHGRRRRRHHVLNEVIMKLQQELEKLKNENQALLQQISATPPNNTTVNRTNVAQHTTRGRGGRGRGHGRRRRRHHVLNEVIMKLQQELEKLKNENQALLQQISATPPNNTTVNRTNVAQHTTRGRGGRGRGHGRRRRRHHVLNEVIMKLQQELEKLKNENQALLQQISATPPNNTTVNRTNVAQHTTRGRGGRGHGRRRRRHHVLNEVIMKLQQELEKLKNENQALLQQISATPPNNTTVNRTNVAQHTTRGRGGRGHGRRRRRHHVLNEVIMKLQQELEKLKNENQALLQQISATPPNNTTVNRTNVAQHTTRGRGGRGRGHGRRRRRHHVLNEVIMKLQQELEKLKNENQALLQQISATPPNNTTVNRTNVAQHTTRGRGGRGRGHGRRRRRHH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01275025;
- 90% Identity
- iTF_01275025;
- 80% Identity
- iTF_01275025;