Ppup015158.1
Basic Information
- Insect
- Pteromalus puparum
- Gene Symbol
- -
- Assembly
- GCA_012977825.2
- Location
- Scaffold:1177230-1189444[+]
Transcription Factor Domain
- TF Family
- zf-LITAF-like
- Domain
- zf-LITAF-like domain
- PFAM
- PF10601
- TF Group
- Zinc-Coordinating Group
- Description
- Members of this family display a conserved zinc ribbon structure [3] with the motif C-XX-C- separated from the more C-terminal HX-C(P)X-C-X4-G-R motif by a variable region of usually 25-30 (hydrophobic) residues. Although it belongs to one of the zinc finger's fold groups (zinc ribbon), this particular domain was first identified in LPS-induced tumour necrosis alpha factor (LITAF) which is produced in mammalian cells after being challenged with lipopolysaccharide (LPS)[2]. The hydrophobic region probably inserts into the membrane rather than traversing it. Such an insertion brings together the N- and C-terminal C-XX-C motifs to form a compact Zn2+-binding structure [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.11 2.8e+02 1.7 0.1 15 48 15 47 12 51 0.71 2 5 2e-13 5e-10 39.4 0.3 2 41 106 145 105 158 0.91 3 5 2.8 7.1e+03 -2.8 0.1 29 39 293 303 284 321 0.60 4 5 3.7 9.5e+03 -3.2 0.3 32 59 333 355 304 357 0.50 5 5 4 1e+04 -3.2 0.2 27 32 352 358 335 376 0.49
Sequence Information
- Coding Sequence
- GAAAACCCAGTCTCGAGCCGATCGAGAGTCGCTGTCGCGCTCGTCAGTACTTCAGTCCCGAGTCGAACTTCGACGCGAGCACACGTTTCTCTCTCTCTCTTCGTGAGATTTATCGTAGTGGTGTTTTGTGAGCCGATCTTTGGATCGTCGCCGATTTTTTTTCTTCTTCTCGTTGAGCGTCAGATACTATCGAGAATGAACAAACAAGGACCCCCTCCCGCGGGATTCATGCCGCCACCACCTTACAGCGATGGGGCACCTCCACCTGCAGGAGCCCCAAACGTCGTCGTCATGCATGCCCCACAGCTCGGACCTGACCCACAGACAATGACTTGCCCCTACTGCGCGGCAACAATCACCACCAGCATCGAGACCAGTCCATCCATGAAGACTCATCTCATGGCTCTTCTGCTCTGCCTCTTCGCCATTTCGGGGTTTGCTGTACTCAACGACGAGAGGATCCAAAGGAGTAAGGATTTGGAGTGGCACGATTTTCACCATGAAATCTTGAAAGTCGCTTATTATCAGGAAAAAAATCTTGTAAGCTTCATTGAAAACGATACCAGAATTTCTGGTGTCGTGGGAGAGGTTTGGGAGATTCTGGCCGACTATTTAAATTTCACATTAGTTCCTGTGAGATTACAAGATCGAAATTTTGGTAACGAGTTGGAGAACGGAAGTTACGATGGTATCTTGGGACTCATACAGTCGAATCAATCGCAGATAATCCCGAGATCAGGAATATTTAGAAATCGACTATCACTGGTAGATTACACTGTGCCGCTTTGGAACATTCGTTACCACTTGTACATAAAACCAGAATGGAGTCACGACGATGCCTGGATGTTCCACTTGTTTTCTTTGAAAGTCTGGTATACATTCGTTTTATTGCTATTTATCCTAAGCATAGCAGGTTACATTTGCGAGAAGAATTCGGTTGTGAAAACGAACGAAAAGATTGTTTACAATTTACAAGATCACATATTTTACACTGTAGCCATTGCTTGTAATCAAGGATGTGTCCCTGCTGAACTTCACAACAGATCCAGGCTCATCTACATCTGCACGAGCATGTTCTCCTGGGTAATCCTAATCGCCTTCAGTTCCAACGCTATTTTCCTCATGATGAACAAAAAGTTCATTCTACCTTTCACTGGCCTGAGAAGTTTGATCCAGGATAGCAAGTACGACGTTGTAGCGTTCAGCGGATCTATGGTTCACAGAGATTTTAAGGAGACGGTATCGCAGTATTACAAATACTCTCATGACTTTATGCGAGTGTCTTATGCCCCGGCAGCAGGAGAAATATTTAAAAAAGTCTGTTTCACCGAAAACAAAAAGCTCGCGGCTTTTGAAGCTGAGGATCGACACAAAGCTATCGGCAAAAATATTTGCCGATTGATACCGACAAAGGCATCTTACTTCGAGACGTGGATCGCGTCGGCGATTAAAAGAGGCTTTCGTTATAAGCGTAGTTTCGACATAGGGATTTTGAAACTATCCGAATTCGGAATAATAGACGGTCTGAGAGATCGATGGTTAGACTGGAAGTTTGACGACCACGAAGAAATTCCCTTTCAGTCCATCGACATGAGCCAAGTACATCTGATATTCAGTATACTAGTCCTGGGACTGATTCTGTCCATGTTAATTTTGCTGCTCGAGTACATGACTTATTTTAGAAGCAGGTTGTTCATCAGGAAAAAATCAAAACCGAGTAAACCAAAACTGACCGTGAAGCCCAAGCTACCTGAAATCGATAGAAATCGTGTCTTCCATGTATATAGATAG
- Protein Sequence
- ENPVSSRSRVAVALVSTSVPSRTSTRAHVSLSLFVRFIVVVFCEPIFGSSPIFFLLLVERQILSRMNKQGPPPAGFMPPPPYSDGAPPPAGAPNVVVMHAPQLGPDPQTMTCPYCAATITTSIETSPSMKTHLMALLLCLFAISGFAVLNDERIQRSKDLEWHDFHHEILKVAYYQEKNLVSFIENDTRISGVVGEVWEILADYLNFTLVPVRLQDRNFGNELENGSYDGILGLIQSNQSQIIPRSGIFRNRLSLVDYTVPLWNIRYHLYIKPEWSHDDAWMFHLFSLKVWYTFVLLLFILSIAGYICEKNSVVKTNEKIVYNLQDHIFYTVAIACNQGCVPAELHNRSRLIYICTSMFSWVILIAFSSNAIFLMMNKKFILPFTGLRSLIQDSKYDVVAFSGSMVHRDFKETVSQYYKYSHDFMRVSYAPAAGEIFKKVCFTENKKLAAFEAEDRHKAIGKNICRLIPTKASYFETWIASAIKRGFRYKRSFDIGILKLSEFGIIDGLRDRWLDWKFDDHEEIPFQSIDMSQVHLIFSILVLGLILSMLILLLEYMTYFRSRLFIRKKSKPSKPKLTVKPKLPEIDRNRVFHVYR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01274933;
- 90% Identity
- iTF_01274933;
- 80% Identity
- iTF_01274933;