Ppup008141.1
Basic Information
- Insect
- Pteromalus puparum
- Gene Symbol
- -
- Assembly
- GCA_012977825.2
- Location
- Scaffold:8092-13583[+]
Transcription Factor Domain
- TF Family
- zf-LITAF-like
- Domain
- zf-LITAF-like domain
- PFAM
- PF10601
- TF Group
- Zinc-Coordinating Group
- Description
- Members of this family display a conserved zinc ribbon structure [3] with the motif C-XX-C- separated from the more C-terminal HX-C(P)X-C-X4-G-R motif by a variable region of usually 25-30 (hydrophobic) residues. Although it belongs to one of the zinc finger's fold groups (zinc ribbon), this particular domain was first identified in LPS-induced tumour necrosis alpha factor (LITAF) which is produced in mammalian cells after being challenged with lipopolysaccharide (LPS)[2]. The hydrophobic region probably inserts into the membrane rather than traversing it. Such an insertion brings together the N- and C-terminal C-XX-C motifs to form a compact Zn2+-binding structure [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.7e-13 4.3e-10 39.6 0.3 2 41 41 80 40 93 0.91 2 4 2.7 6.7e+03 -2.7 0.1 28 39 227 238 219 251 0.57 3 4 3.4 8.7e+03 -3.0 0.3 32 59 268 290 242 292 0.49 4 4 3 7.5e+03 -2.9 0.3 26 33 286 294 269 312 0.48
Sequence Information
- Coding Sequence
- ATGAACAAACAAGGACCCCCTCCCGCGGGATTCATGCCGCCACCACCTTACAGCGATGGGGCACCTCCACCTGCAGGAGCCCCAAACGTCGTCGTCATGCATGCCCCACAGCTCGGACCTGACCCACAGACAATGACTTGCCCCTACTGCGCGGCAACAATCACCACCAGCATCGAGACCAGTCCATCCATGAAGACTCATCTCATGGCTCTTCTGCTCTGCCTCTTCGCCATTTCGGGGTTTGCTGTACTCAACGACGAGAGGATCCAAAGGAGTAAGGATTTGGAGTGGCACGATTTTCACCATGAAATCTTGAAAGTCGCTTATTATCAGGAAAAAAATCTTGTAAGCTTCATTGAAAACGATACCAGAATTTCTGGTGTCGTGGGAGAGGTTTGGGAGATTCTGGCCGACTATTTAAATTTCACATTAGTTCCTGTGAGATTACAAGATCGAAATTTTGGTAACGAGTTGGAGAACGGAAGTTACGATGGTATCTTGGGACTCATACAGTCGAATCAATCGCAGATAATCCCGAGATCAGGAATATTTAGAAATCGACTATCACTGGTAGATTACACTGTGCCGCTTTGGAACATTCGTTACCACTTGTACATAAAACCAGAATGGAGTCACGACGATGCCTGGATGTTCCACTTGTTTTCTTTGAAAGTCTGGTATACATTCGTTTTATTGCTATTTATCCTAAGCATAGCAGGTTACATTTGCGAGAAGAATTCGGTTGTGAAAACGAACGAAAAGATTGTTTACAATTTACAAGATCACATATTTTACACTGTAGCCATTGCTTGTAATCAAGGATGTGTCCCTGCTGAACTTCACAACAGATCCAGGCTCATCTACATCTGCACGAGCATGTTCTCCTGGGTAATCCTAATCGCCTTCAGTTCCAACGCTATTTTCCTCATGATGAACAAAAAGTTCATTCTACCTTTCACTGGCCTGAGAAGTTTGATCCAGGATAGCAAGTACGACGTTGTAGCGTTCAGCGGATCTATGGTTCACAGAGATTTTAAGGAGACGGTATCGCAGTATTACAAATACTCTCATGACTTTATGCGAGTGTCTTATGCCCCGGCAGCAGGAGAAATATTTAAAAAAGTCTGTTTCACCGAAAACAAAAAGCTCGCGGCTTTTGAAGCTGAGGATCGACACAAAGCTATCGGCAAAAATATTTGCCGATTGATACCGACAAAGGCATCTTACTTCGAGACGTGGATCGCGTCGGCGATTAAAAGAGGCTTTCGTTATAAGCGTAGTTTCGACATAGGGATTTTGAAACTATCCGAATTCGGAATAATAGACGGTCTGAGAGATCGATGGTTAGACTGGAAGTTTGACGACCACGAAGAAATTCCCTTTCAGTCCATCGACATGAGCCAAGTACATCTGATATTCAGTATACTAGTCCTGGGACTGATTCTGTCCATGTTAATTTTGCTGCTCGAGTACATGACTTATTTTAGAAGCAGGTTGTTCATCAGGAAAAAATCAAAACCGAGTAAACCAAAACTGACCGTGAAGCCCAAGCTACCTGAAATCGATAGAAATCGTGTCTTCCATGTATATAGATAG
- Protein Sequence
- MNKQGPPPAGFMPPPPYSDGAPPPAGAPNVVVMHAPQLGPDPQTMTCPYCAATITTSIETSPSMKTHLMALLLCLFAISGFAVLNDERIQRSKDLEWHDFHHEILKVAYYQEKNLVSFIENDTRISGVVGEVWEILADYLNFTLVPVRLQDRNFGNELENGSYDGILGLIQSNQSQIIPRSGIFRNRLSLVDYTVPLWNIRYHLYIKPEWSHDDAWMFHLFSLKVWYTFVLLLFILSIAGYICEKNSVVKTNEKIVYNLQDHIFYTVAIACNQGCVPAELHNRSRLIYICTSMFSWVILIAFSSNAIFLMMNKKFILPFTGLRSLIQDSKYDVVAFSGSMVHRDFKETVSQYYKYSHDFMRVSYAPAAGEIFKKVCFTENKKLAAFEAEDRHKAIGKNICRLIPTKASYFETWIASAIKRGFRYKRSFDIGILKLSEFGIIDGLRDRWLDWKFDDHEEIPFQSIDMSQVHLIFSILVLGLILSMLILLLEYMTYFRSRLFIRKKSKPSKPKLTVKPKLPEIDRNRVFHVYR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01274932; iTF_01274934;
- 90% Identity
- iTF_01274932; iTF_01274934;
- 80% Identity
- iTF_01274932; iTF_01274934;