Basic Information

Gene Symbol
ncor1
Assembly
GCA_012977825.2
Location
Scaffold:437670-459090[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.4e-08 2.2e-05 24.4 0.0 3 43 481 521 480 524 0.96
2 2 3.3e-14 3.1e-11 43.2 0.7 3 46 984 1027 982 1027 0.97

Sequence Information

Coding Sequence
GTGAACGAGCGTGTAGCGATAAGCGTGAGCAGTAGCCCTGTCTCGTCGCAAGTGGTTGGAGTCGGTGCGGGTGGCGAATACGTAGTAAGCGGTCGGGGGGATCGGCAGCGGATATCTCTGTTACCGGCACCGGCTTCGATAGCGCCCGCGGCCTCGCCCACCGCGCCCACGGACTATCACGCGGCCGCGGCTGCTGTGGCTCGCAACAGCAGGGGTACCGCCGGTGCGCCGCCACCTCCGTCGCCCGCCGGCCTCCTGGCCGCCATGCAGCCGCAGGACTATCGGCCCAGTCCTGTTGACATGGCGCAGCAACAGCAGCAGTCGCAGCAGCAGCAGCAGGACGCGCCGCCCTTCAAAAAGATTCGCCTCGGACAACCCACCCAGCTGGTGCCGTCAACCCAGCAACATAGCATTAGCGGCGTTAATGTGCTGTCGCATTCTGAGGTGTTTAGAAACCCGGTGCAGGACATCATCATCAAACAGAGGGTCCAAACCGCACAGATCCAGCCTCTCAGGATAGACACAAGGCCGACAGCTGGTGTGTACACGCCACAAACAGAGGCGATTTCGCCGACTCTTCCTGAGCCTAATACACAAGAGGACGTGGCATTTAAAACCACCAAAGACGATCTTTTGCAACAGATCGCCAAGGTTGATCGGGAAATTGCAAAAAGGGAATCACAGATTAGCAAACTTCGAAAAAAGATGAAAGAGTTAGAAGAAGTAGCTAGTAGACCCTTGGAGGCGCCTGGCACAAAACGGCCTGTGGAAGAGGCGTCTTCACAACCCAAGCATCAGTCCCTTGTACAAAAAATATACGCTGAGAATAGGAAAAAGGCGGAGGAGGCGCACAGGCTGTTAGATAAGCTAGGTCCAAAAGTGAAACTGCCACTCTACAATCAGCCCTCTGACACGAGCGTGTACCAGGAAAATCGCGTTAGGCACCAGTGCATGAAAGAGCGGCTGGTTGCGAGACTTCGGAAGGAACACGCGGATCGCGCCACGCTGCATCGTCAGCAGTCACAGACCTATGCGATACTCGTGCAGGAGTGGCACCGAAAGGTAGAGAAGCTCGAGGCGACGCAAAAACGTAAGACGAAGGAGGCCAAGAACCGTGAGTTCTTCGAGAAGGTCTTTCCCGAACTGCGCAAGCAGCGCGAAGACAAGGAGCGCTTCAACAGGGTTGGAGCACGAATCAAGAGCGAGGCCGATCTCGAAGAAATCATGGATGGTCTGCAGGAGCAGGAGGAAGAGTTGTCGACCGAGTTAAAAAATGCGTTAAAAGAACTTCAGATGGAGGACAAAAAGATGCGTTCATATGCGGTGATACCGCCGCTGTTGCTGGACGCGAAGCAGCGAAGGATCGCGTTTCAGAATCGCAACGGTCTACTGCAGCCTGAGGAGCTCGAGGCGATGCACAGCGAGAGAAAGCTGATCAACGTTTGGAGCCAGACCGAGCACGATATGTTCAAGGAGAAGTACCTCCAGCACCCCAAGAACTTTGGAGCGATAGCGCAGTCATTCGAGCACAAGTCCGTCGCGGATTGCGTGCATCACTACTACCTCACTAAGAAAGCGGAGAATTATAAGCAGCTATTGAGAAAATCGAGGCGTACGCGTAGTTCTCGAAACAATCCTAACAATAAGGTAAATAATAGTAACTCCACTATCGGACCTATAGATATATTGACGACGGGAGTAACGACGAGGCTGCAGCGTGAGCAGCAACAGAAAACCCAGGAAAATCCCCAGAGCAGCGCGGCGGCGTCGAGTAGTAGTAGTAGCGCGAACGCGACGACGTCGAGCTCCTCTTCAACAACAAATACCACCTCCACCTCGTCCGCGTCGACGACGGTCACGAGTGCGAGCTCCGTCACCACGAGCTCGTCGTCTGCGTCTTCGAGTAACGCTGCCGTGACCGCTGCGGCGAGTTCGTCCACCAGTAGCAGTAGAGATGCTGCCTCGGCGAGTTCGACCGCGGAGCCCTCGTCGACGGCAACGACGACGACAATTACGTCGACATCCACAGCAGCAGCGTCAGCATCCGTCCCGAGTACCAACGCGACGACGACGACGTCGAGCGTACTCACGACGACGCCCACGTCGTCGACCAGCGCCAAGGACGCTCGCGAGGCCAACAAGGAGAACAAAGAGATTAAGACCGAGCCTAAAGACTCGATACTCAAGGATATCAAGGAGGAGTCACAGTCCAGCTCCGAGACACACTCCAGCAGGGAAATAAAGATTGAAGGCAAGGGCGCCCTCTCCTCGTCATCCAACACAAGTACGGCCAATACCAACAACGCGAGTAGTAGCCTTCAGATGGAGATTCAGCAGCAGCAGCAGCAGCAACAACAACAGCAACAGCAAAAAGACAAGAAAAAGAATGCGGGAATCACTGGCGGATCGGCCGCCATCAGCAGGTCGAAGGATAAGAAAAAGGAAAATCACGCGACGCCTATGGAGACCAGTGACGAGGAGGCCCAGGCCATGGACGCGATGGAACTCGGCGGCAGGCAGCTGGGCCCGCACCCCTGCGCGATCTGCCAGACGATGGTGGAGGCGGGCAACCAGAGCCGGCCGCTGTCGCGCAGCCAGGCCTCGCAGTACGGGCTGCGCGAGGAGCAGGTGCCTCAGGGCGCCAGGGTCTGCAACACCTGCCGCTGCAAGTCCGTCCGGGGACGGTACACCACCTGCCCGCTGCCCGGATGCCCCAACCTCAACAGCGCCAGCAGCAAGACCAGGGTCAAGCGGTTGCGCGCGCTGCCGCCCAAGTGGAACGACCTGCCGCCCGAGATCCGGGACCCCATCGTCCAGGAGTTCCAGATCCCGAGCAACACGACCAAGTGCTGCTCGGCCTGCTTCAACAGGATATCGCGCCGGCTGGCGCCGCACTTCTCCGGCTCGAGCGGCGCCGACGGCGCGGACGAGGCCGACGCGATCGGCCGGCAGTGGAGCGACGAGGAGCTCGAGCAGCTGCGCAAGGCCCTGCGGGAGCACGGCACCAACTGGCCCAAGGTCTCCGAGCAGATAGCCGGCAAGTCGAACCACCAGTGCAAGAACTACTACCTGACCTACCGGAAGAAGCTCGGCCTGGACCAGGTCGTCGCCGAGTACTACCAGTCGCTCGGCGAGGAGCGCAGGCCCTGCCTCACCGACGAGGAGGAGAGCGGCAGCAGCACCAGCAGCTGCGACGAGTTGGCTGTGCATGATACGAGCGATACTGCGAGCGCGGGCAGTCCCGCGAACACGATATCGAGCAGCACGCCCACCGCCTCGGCGGCGTCCTCGTCGTCGGCGACGGCGGGCGGCGGCCTGCCGATGCCCTTCCCCCAGTCGCAGGACGCGAAGGTCGCCGAGAAGTTCGCTGACGTGGCGGTGGTGTCGTTGGTCGCGCCCTCGCCCATGACCAGCTCCCAGCAGCCGGCCCAGCAGAATCCGCCCACGAGCACGAGGGAGGACTACGACAGCTCTGCCACGGAGACGGCGGACGAAGGTCAGGGTGGTGCCGACTTGGACACTAGCGGCGTTGTGGTCACGCTCACGGCGCCCGCGGCCGTTGTCGCGAGCCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCCGCAGCCGCCCGGACTCGTCCAGACGCACCCCCAATCGCCGGCGCTCGTGCAGTCGCCGCCCTCCACCACGAGCAACAACAATCCGCTCACCGTCAAGGACCTCATGCTGGGCGTGATCGAGATGCAGCTGAAGCGCAACCATAACAGCCCGGGAGGCTCGAGGTCGTCGGTACCCGTCAGTTCGGGAACACCGACGATATCGAGTATCCTGAAGACGGACCACCGCAACGACATCACCTTTGTGCGCGAGTACAAGGCGCCGACGCAAGCTCCCAGCATGTCCAACACTGCCATACCCAATCGGGATCCGAACCTGGCGACGCTCTCGGTGGTGTCTGGGCCGCATCACGGGCACAGGTCGGCCTCCAGTCCACAGCAGATAAGCCAGATGCAGGCGACCATCACCCCCTGCCCGCCGTCGGCGCCCAACCAGCAGCCGCAGCCCAGTGGACAGGATATGCTGCCCAAGGAGGGTTTGGTCGTCATGCAGGTACAGCAAGCGATGCGGGACACCGAAGGCACGCTTGATCTGAGCATCAAAAAGCCACGCCAGCAGCAGGAGTATAATCACACGCTGCAGCCACCGCCACCGCATAAACCAGCCGCGGTGAGTCACTACAGAGCGGAACCTCCTCCGCCACCGCACTCGACCTACTACCACTCTCACGCGCATCCGGAGTCTCAGAGCCGCGGTGCCAAAAGTCCGCACGTGTACGCCTCGTCGCCTAGGCCTCAGGCGCCCCTTACTCCGAAGATGACCAAGGTCTCGGTGCCACCGACGTCGCACCCTAAACTCTCGCCTAAACTCAGCAACATGAGCACGCCACACAAAACCGGCTCGATCACCCACGGAACTCCAGTATCCACCGCAAGGTACGACGGACTGCTCAGACAGATGACGCCGCCTGGGAACGCCAGTCAGCCCAATCCCAGCACTACTCCAGTAGGTTCCAAAGAAACGGGCTCCATCACGCAAGGAACGCCTGTACACCCATACGCCGTGGACAAGCGTGCTCCGATATACGACTACCGTTCCATTAGACACTCTCCTGTCACTACGAGCAACATGCCTGTACAGGCGTCCCAAAACTCCGGAGTCGTCGTCAGTCATAGCCAAAGCGGCAGCAATCAATATAACTCGTACCCGCCACGTCAAGCTCCAAATTATACCATGGAGCAACTCTCGTCTCGTCAAATCATCATGAATGACTACATAACCAGCCAACAGATGCATCCGCGCAACCGCAGTGGCGGTTCCGCCGAAGGTGAACGACCAAAAAGTGAAGCTCCCCAGGACTTTTTATATTTTCACGCAGCAAATACTCCTCCTTCCCAGACGCACACTCAGCCGCGCCAGGGAGTTATCCACAGGCACAATACGCCGAAACATTACGCGCCACCACCGCCTGGTCTCGAGGCCTTCTCCAGCTTAGTAGACGTGGCCGTCCAGCAGCCAAGTCTGCCCGTACCCCACCCATCGCCAGCCAGCAGCAGTGGGCATGAAGGTCTCTGCATGTCTATCGAGCGCATGTATCCAGGAGGCTATACGATAGATAATCGTTCGCTGCAGAATATGCCCAGGATGGCTAGACAACCGACGATGCAACATCAGATGGCTGCAGCCATGCAGCAAAGAGAAGAGCAGCAACGAGAACGCGAACGTGATAACATGTTGCGCGAGAAGCAGCAGCAAGAGGAGGAACAGCGGGAACGAATTCAGCGCGAAAAAGAGCAGCAGCAGCAGCAACAACAGCAGCTACACCATCAAAGGGAGATGGAACGCATTGCCGCGCATCAGCGTGATAAGGAGATTCAACAACAACAGCAAGAGCACAGATTGGCTCAGCAGCAACGAGAGCAAGAAATGCATCAAGCTGCGGCTGATCACCGAATAGCTGTTCAGCAGCGTGAGAAAGAGATGCAGCAGCAACAACAACAACAGCAGCAGCAGCAGCAGCAGCAGCAGCGAGAAAGAGAGCGAGAACGGGAGCGGGAACGAGAGCGAGAACGAGAACGTGAGCGGGAACAGCAGAGCCATGCGGATCATAGATTAAGCATGCATCAGCAACAGCAGCAGCGCGAGAAAGATATGCAGCAGCAACATTATCGGCTTGTGCAACACCAGCATCAGCGCGAGAAGGAGATGCAGTTAGCAGCTGCCGCAGCACAACGTGAAAAGGAACACCAAGAGCACAGGCTGGCAGTGCAACAGCAACAGCAACGCGAAAAAGAAATTCAGCAGCAAGAACTTAGGCTAGCTGCGCAACATCAGCGGGAAAAGGAACTCCAACAGCATGCGGATCATAGGCTGGTTATGCAACGCGATAATCTAGCCTACCTGCAACAACAACAACAACAACAACAACAACAGCAACAACAACAACAGCAACAGCAACAACAACAACATCAACAGAGATTTCAGAAACAGCATCAAATGCAACAATTTCACCAACAACGTATGGAGGCTGAGAGACGGCAAATAGTGCAGATTTACAAGGATCAGAAAGAGGCTCAGCTCTATAGGGAACTAGAGCGGCAATGCGAATCACCCAGCATGGCAAAAGGCGGCGGGTTCTTCCAACCTACACGAATACAACAACAAACTCAACCGCCTCCACCTTCTTCTAGGCACAGTCAATCATCTTCCAATCAACAAAGTGACTCGTCGTCTACATTGACTGCCGCCAGTTTGATTGATGCTATTATCACGCATCAAATCAATCAGAACACTGACAACAACAGTGGCAACAATCCTGCCAACAATCAGCCAACACGTCCTGGTGATCGCCTTTTCCAGGGTTTTCATAGAGATAGTCCAGCAGAGCCTAACGGCATGGCTCACAGTCCAGCTGGGGAAGAAAGAGAATCTAACAGAGAATCAGGCAGTGGAAGCGGCAGCGCAAGCAGTGGTAAGGCCATTACCCTTGGCGAACACGTAGACCACATTGTGAGCAAGGATTATGGACCGCCGATATCTTCCTATAGGCCTTATCCAGGGTATCAGATCTCGGAAGAACAGTGGAAGCGGAGAAAAGGTGCTGAACCGGATTCTGTAAAATCTGGCGATGAGCGGCAAATAATCCGCGTTGCCCAGCAAAAGTCAGCTTCTTCACAGTCTCAACAGTCCCACCAGAGTCAACAGTCGAGCAAGCAACAGCAACAGCAACAATTCCACACGGAGCCGGTGTCGCCACCAGAGCCCTCGACGAACCACTATCCACGTCGTTTCTATGAGCCCAGCACTGCCACGACCACGACATCAGTGACGCCCTCCAGCAAGTCACACCTTTCACCTCTCGACTATGTGAAGAACAAAATTGTTGAAGTGATGCGCACTGAGGATGACAAAACGAGCTCCGGTGACAGAAACGGCGGTGGTGCTGGCAATGACAAAGACGACAAGTCTTGCGCTGACAGCTCGCCAGGTGGAGAGATGGTCATTGACGAGTCGCCCAGCCAGCCGCCAGCTCCGACTCCAACTACCTTTTATCCATTCAACGCGTTAGGCGTGCACACCGGGCCACCACCTGCGCCACCGCCGACGAGTGGAGGAACTGCCGTGACGGTTGTCCAAAGCGAGGAACCTGCGCCCCTACTCTGCGCCCAGTACGAGGCTCTCTCGGACGAGGATTGA
Protein Sequence
VNERVAISVSSSPVSSQVVGVGAGGEYVVSGRGDRQRISLLPAPASIAPAASPTAPTDYHAAAAAVARNSRGTAGAPPPPSPAGLLAAMQPQDYRPSPVDMAQQQQQSQQQQQDAPPFKKIRLGQPTQLVPSTQQHSISGVNVLSHSEVFRNPVQDIIIKQRVQTAQIQPLRIDTRPTAGVYTPQTEAISPTLPEPNTQEDVAFKTTKDDLLQQIAKVDREIAKRESQISKLRKKMKELEEVASRPLEAPGTKRPVEEASSQPKHQSLVQKIYAENRKKAEEAHRLLDKLGPKVKLPLYNQPSDTSVYQENRVRHQCMKERLVARLRKEHADRATLHRQQSQTYAILVQEWHRKVEKLEATQKRKTKEAKNREFFEKVFPELRKQREDKERFNRVGARIKSEADLEEIMDGLQEQEEELSTELKNALKELQMEDKKMRSYAVIPPLLLDAKQRRIAFQNRNGLLQPEELEAMHSERKLINVWSQTEHDMFKEKYLQHPKNFGAIAQSFEHKSVADCVHHYYLTKKAENYKQLLRKSRRTRSSRNNPNNKVNNSNSTIGPIDILTTGVTTRLQREQQQKTQENPQSSAAASSSSSSANATTSSSSSTTNTTSTSSASTTVTSASSVTTSSSSASSSNAAVTAAASSSTSSSRDAASASSTAEPSSTATTTTITSTSTAAASASVPSTNATTTTSSVLTTTPTSSTSAKDAREANKENKEIKTEPKDSILKDIKEESQSSSETHSSREIKIEGKGALSSSSNTSTANTNNASSSLQMEIQQQQQQQQQQQQQKDKKKNAGITGGSAAISRSKDKKKENHATPMETSDEEAQAMDAMELGGRQLGPHPCAICQTMVEAGNQSRPLSRSQASQYGLREEQVPQGARVCNTCRCKSVRGRYTTCPLPGCPNLNSASSKTRVKRLRALPPKWNDLPPEIRDPIVQEFQIPSNTTKCCSACFNRISRRLAPHFSGSSGADGADEADAIGRQWSDEELEQLRKALREHGTNWPKVSEQIAGKSNHQCKNYYLTYRKKLGLDQVVAEYYQSLGEERRPCLTDEEESGSSTSSCDELAVHDTSDTASAGSPANTISSSTPTASAASSSSATAGGGLPMPFPQSQDAKVAEKFADVAVVSLVAPSPMTSSQQPAQQNPPTSTREDYDSSATETADEGQGGADLDTSGVVVTLTAPAAVVASQQQQQQQQQQQPQPPGLVQTHPQSPALVQSPPSTTSNNNPLTVKDLMLGVIEMQLKRNHNSPGGSRSSVPVSSGTPTISSILKTDHRNDITFVREYKAPTQAPSMSNTAIPNRDPNLATLSVVSGPHHGHRSASSPQQISQMQATITPCPPSAPNQQPQPSGQDMLPKEGLVVMQVQQAMRDTEGTLDLSIKKPRQQQEYNHTLQPPPPHKPAAVSHYRAEPPPPPHSTYYHSHAHPESQSRGAKSPHVYASSPRPQAPLTPKMTKVSVPPTSHPKLSPKLSNMSTPHKTGSITHGTPVSTARYDGLLRQMTPPGNASQPNPSTTPVGSKETGSITQGTPVHPYAVDKRAPIYDYRSIRHSPVTTSNMPVQASQNSGVVVSHSQSGSNQYNSYPPRQAPNYTMEQLSSRQIIMNDYITSQQMHPRNRSGGSAEGERPKSEAPQDFLYFHAANTPPSQTHTQPRQGVIHRHNTPKHYAPPPPGLEAFSSLVDVAVQQPSLPVPHPSPASSSGHEGLCMSIERMYPGGYTIDNRSLQNMPRMARQPTMQHQMAAAMQQREEQQRERERDNMLREKQQQEEEQRERIQREKEQQQQQQQQLHHQREMERIAAHQRDKEIQQQQQEHRLAQQQREQEMHQAAADHRIAVQQREKEMQQQQQQQQQQQQQQQREREREREREREREREREREQQSHADHRLSMHQQQQQREKDMQQQHYRLVQHQHQREKEMQLAAAAAQREKEHQEHRLAVQQQQQREKEIQQQELRLAAQHQREKELQQHADHRLVMQRDNLAYLQQQQQQQQQQQQQQQQQQQQQHQQRFQKQHQMQQFHQQRMEAERRQIVQIYKDQKEAQLYRELERQCESPSMAKGGGFFQPTRIQQQTQPPPPSSRHSQSSSNQQSDSSSTLTAASLIDAIITHQINQNTDNNSGNNPANNQPTRPGDRLFQGFHRDSPAEPNGMAHSPAGEERESNRESGSGSGSASSGKAITLGEHVDHIVSKDYGPPISSYRPYPGYQISEEQWKRRKGAEPDSVKSGDERQIIRVAQQKSASSQSQQSHQSQQSSKQQQQQQFHTEPVSPPEPSTNHYPRRFYEPSTATTTTSVTPSSKSHLSPLDYVKNKIVEVMRTEDDKTSSGDRNGGGAGNDKDDKSCADSSPGGEMVIDESPSQPPAPTPTTFYPFNALGVHTGPPPAPPPTSGGTAVTVVQSEEPAPLLCAQYEALSDED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00692853;
90% Identity
iTF_01036950; iTF_01035354;
80% Identity
-